You are here

Home

KJC3_009315-T1, KJC3_009315-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009315-T1
Unique NameKJC3_009315-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:90001..92298+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009315-T1 ID=KJC3_009315-T1|Name=KJC3_009315-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2298bp|location=Sequence derived from alignment at ch7:90001..92298+ (Aspergillus niger KJC3)
CCGCGGAAATGAGCTGTCTCGACGAACCCATTGAAATAGGGGTCCTGTCA
GACCTTCGTCCCTCCAGATCGATTGGCCTAGCGATCGGCCCCAGCCGTCT
TTAAGGGTCTGGTCTGCGAAGTGGCCGATCATCATGGTATGAAATATTGT
ATTGGCTTGGTTGCACATTGGAGATGGCATGTAGTGGATCTAACAACCTG
CTGTTAGGATCTCACTATACGAAGTGGATATTTGCTTAGCGCACCACAGG
GTATCCAGGTCGTTCTCGGTCGCACCAACGATATGCCACCAAGTCAGAGG
CCTTTTAGGCCCACCTGCAGCCGGCCATTCAACTCCGAAGCAACTCGTGA
ACTTGTGACTGCAACTTTGTCATTGAGCTGACGGTTGGCCATATGAACTC
CCTCGATATCTCTTTCACTGCTAGATCAAGCGGATCAAGGCCCCAAGAGT
AAATGGCTACGGGCATCATCGTACTAATAGTGAAGAGTTACATGTTGAAT
TGTCAGCTTGGGAAGTGTTGATATTTATCATGGTTGCGACCAAAGGGGGT
TGAGGGGCTTGCCAAAACGAATAGGCTGCTGACCTGATATATGCTACTGT
TTACAGAGTATACTTCCTCGGCTGCAAAAAGCTTCAAGAAGAGACGGGAT
ATCTAAAAGTCAAGATAATCAACCATCAAGAGGTTTGTTCTGACCGAGGT
CCGCCCTTCCACCATCACAGATGTGATGCGTCCACGGCAAGTGCAGATGA
CCTGCAGGAAGGTTGCCACGGCAATCCCGAGCTTGTCCAGAGACATCAGC
AGCCATCTCTGTTCACGGATTCAACTCCATCTTCCTGCCAGTTGAGGAGA
CTCATGTGTTTCACGATGTTTACTCGGCTCGGTCTATACCTCCTGGCCCT
GTTCTCTCCCACCCGTGGCGATACCATCCACCACCGAACTTATTTCTACG
TTGGAGGGAACTACTCAATCACCGACAATGGCGAGCATATTTACACCAAT
CAGATATATGTCGAAAAATTGACGCCCGCACAAGTCACTCAGCCATATCC
GATAGTGTTTGTCCATGGTCAGGCTCAGACAGCGACAGTAGGATAACCCA
GGCTCCCTTGGTGAAATAACTCTAACAGAGCATGGAATAGAATTGGTTGA
ACAAACCAGACGGCCAGCCAGGATGGGCATCATACTTCCTTGACAAGGGC
TACGAATGCTACCTCTTCGATCAGCCGTTCCGGGGCCGCAGTCCCTGGCA
ATCCTTCAGCGAACCACTAGAAACATACTCGGCCGAACACCTGCAACGAT
ACTTCACCGCGCCTGAACGGTATGAGCTGTGGCCACAGGCATCGCTGCAC
ACCCAGTGGCCTGGGACTGGGGTCATGCGCGATCCCATCTTTGATTCCTA
TTATGCCAGTGCTGTGCCGTTTGTTAGTGATAATGTACTGCAGCAAACTG
CCATGCGCGACGCGGGCGCCGCCTTGCTGGATCGAATTGGCCGGCCAGTT
ATTCTGATAGCTCATTCCCAAGGTGGAACCATGGCGTGGCTACTGGCCGA
CCAACGATCCAATCTGGTTCACTCGATTGTCTCCATCGAGCCTGGTGGTC
CCCCGTTCAGCAACGCAATGTTCGGAAACACTTCTGCTCGAGCATACGGG
CTGACTGACATCCCGATTGCGTACTCGCCGCCAGTGTCGGACCCGAGCAC
AGACTTCTCCACCACTATTCTTCCGTCCAACTCGTCAATTCTAGCGGACT
GCATCATTCAGGCGGATGATCCGCCTGCGCGGCAACTGGCGAAACTGAGC
AAAATTCCCGTGCTACTAGTGACGACGGAAGCTTCGTACCATGCGCAGTA
TGACTGGTGCACGGTAAGGTTCTTGCAACAAGCCGGCGTACAGGCAGAGC
ACATGCAATTGTCAGAAATCGGCATTCACGGCAATGGTCATATGGTATTT
CTGGAGGAGAACAGTGACGAGGTTGCGGCTGTTATTCATGACAGGATTGG
ACAGTCCGATGTGGATGGGAAAGCTGAGCTTTGATGAGGTCTTACCGTGC
GTCGAGGAAGGCGATGCTCAAGGTAGCCCTGTGATCTTCAGGTGAACTGT
GGCCGTCTTGTCTGTGCCCAGCGAGTCATGTTATAGCCATGCAAATCACG
AAGTTATCTTTCGCCTAAATTCATATCCGCGGGTGAGGGCCATCATTGAT
ACCTTAGGCGCAGAGCGAGATGCAACGCATGGGCCCCTTCCTCAACGTCG
ACACGTCCACGTAAGCATGCTGTAGGCGATGGAGAAGGAATAGACCTG
back to top

Coding sequence (CDS) from alignment at ch7:90001..92298+

>KJC3_009315-T1 ID=KJC3_009315-T1|Name=KJC3_009315-T1|organism=Aspergillus niger KJC3|type=CDS|length=2256bp|location=Sequence derived from alignment at ch7:90001..92298+ (Aspergillus niger KJC3)
ATGTGTTTCACGATGTTTACTCGGCTCGGTCTATACCTCCTGGCCCTGTT
CTCTCCCACCCGTGGCGATACCATCCACCACCGAACTTATTTCTACGTTG
GAGGGAACTACTCAATCACCGACAATGGCGAGCATATTTACACCAATCAG
ATATATGTCGAAAAATTGACGCCCGCACAAGTCACTCAGCCATATCCGAT
AGTGTTTGTCCATGGTCAGGCTCAGACAGCGACAAATTGGTTGAACAAAC
CAGACGGCCAGCCAGGATGGGCATCATACTTCCTTGACAAGGGCTACGAA
TGCTACCTCTTCGATCAGCCGTTCCGGGGCCGCAGTCCCTGGCAATCCTT
CAGCGAACCACTAGAAACATACTCGGCCGAACACCTGCAACGATACTTCA
CCGCGCCTGAACGGTATGAGCTGTGGCCACAGGCATCGCTGCACACCCAG
TGGCCTGGGACTGGGGTCATGCGCGATCCCATCTTTGATTCCTATTATGC
CAGTGCTGTGCCGTTTGTTAGTGATAATGTACTGCAGCAAACTGCCATGC
GCGACGCGGGCGCCGCCTTGCTGGATCGAATTGGCCGGCCAGTTATTCTG
ATAGCTCATTCCCAAGGTGGAACCATGGCGTGGCTACTGGCCGACCAACG
ATCCAATCTGGTTCACTCGATTGTCTCCATCGAGCCTGGTGGTCCCCCGT
TCAGCAACGCAATGTTCGGAAACACTTCTGCTCGAGCATACGGGCTGACT
GACATCCCGATTGCGTACTCGCCGCCAGTGTCGGACCCGAGCACAGACTT
CTCCACCACTATTCTTCCGTCCAACTCGTCAATTCTAGCGGACTGCATCA
TTCAGGCGGATGATCCGCCTGCGCGGCAACTGGCGAAACTGAGCAAAATT
CCCGTGCTACTAGTGACGACGGAAGCTTCGTACCATGCGCAGTATGACTG
GTGCACGGTAAGGTTCTTGCAACAAGCCGGCGTACAGGCAGAGCACATGC
AATTGTCAGAAATCGGCATTCACGGCAATGGTCATATGGTATTTCTGGAG
GAGAACAGTGACGAGGTTGCGGCTGTTATTCATGACAGGATTGGACAGTC
CGATGTGGATGGGAAAGCTGAGCTTTGAATGTGTTTCACGATGTTTACTC
GGCTCGGTCTATACCTCCTGGCCCTGTTCTCTCCCACCCGTGGCGATACC
ATCCACCACCGAACTTATTTCTACGTTGGAGGGAACTACTCAATCACCGA
CAATGGCGAGCATATTTACACCAATCAGATATATGTCGAAAAATTGACGC
CCGCACAAGTCACTCAGCCATATCCGATAGTGTTTGTCCATGGTCAGGCT
CAGACAGCGACAAATTGGTTGAACAAACCAGACGGCCAGCCAGGATGGGC
ATCATACTTCCTTGACAAGGGCTACGAATGCTACCTCTTCGATCAGCCGT
TCCGGGGCCGCAGTCCCTGGCAATCCTTCAGCGAACCACTAGAAACATAC
TCGGCCGAACACCTGCAACGATACTTCACCGCGCCTGAACGGTATGAGCT
GTGGCCACAGGCATCGCTGCACACCCAGTGGCCTGGGACTGGGGTCATGC
GCGATCCCATCTTTGATTCCTATTATGCCAGTGCTGTGCCGTTTGTTAGT
GATAATGTACTGCAGCAAACTGCCATGCGCGACGCGGGCGCCGCCTTGCT
GGATCGAATTGGCCGGCCAGTTATTCTGATAGCTCATTCCCAAGGTGGAA
CCATGGCGTGGCTACTGGCCGACCAACGATCCAATCTGGTTCACTCGATT
GTCTCCATCGAGCCTGGTGGTCCCCCGTTCAGCAACGCAATGTTCGGAAA
CACTTCTGCTCGAGCATACGGGCTGACTGACATCCCGATTGCGTACTCGC
CGCCAGTGTCGGACCCGAGCACAGACTTCTCCACCACTATTCTTCCGTCC
AACTCGTCAATTCTAGCGGACTGCATCATTCAGGCGGATGATCCGCCTGC
GCGGCAACTGGCGAAACTGAGCAAAATTCCCGTGCTACTAGTGACGACGG
AAGCTTCGTACCATGCGCAGTATGACTGGTGCACGGTAAGGTTCTTGCAA
CAAGCCGGCGTACAGGCAGAGCACATGCAATTGTCAGAAATCGGCATTCA
CGGCAATGGTCATATGGTATTTCTGGAGGAGAACAGTGACGAGGTTGCGG
CTGTTATTCATGACAGGATTGGACAGTCCGATGTGGATGGGAAAGCTGAG
CTTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009315KJC3_009315Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009315-T1KJC3_009315-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009315-T1.utr5p1KJC3_009315-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009315-T1.utr5p2KJC3_009315-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009315-T1.exon1KJC3_009315-T1.exon1Aspergillus niger KJC3exon
KJC3_009315-T1.exon2KJC3_009315-T1.exon2Aspergillus niger KJC3exon
KJC3_009315-T1.exon3KJC3_009315-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009315-T1.cdsKJC3_009315-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009315-T1.utr3p1KJC3_009315-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:90001..92298 +
Powered by Drupal