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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:92685..94850+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009316-T1 ID=KJC3_009316-T1|Name=KJC3_009316-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2166bp|location=Sequence derived from alignment at ch7:92685..94850+ (Aspergillus niger KJC3)
GTAGTCTGACAGTATAAGTGATGGGTAGACCCTAGATTCATCCATCCAGC
AGCACAGATTGATCGTTCTCTATGGCGTCCACTACGGGGTGCGAATCCAT
CTCACTTACCGAACTCGGGGAGCGGCCAATCCCGATGGTGCCAGAAGGCC
CCAACAATGATGCTTCGGTTACCGAGGCTGAGGCCAAAGTCCCTTACTTG
AAGCTCATCGCATCGGGCTTCTCCTTCTTCGTCGCAGGTGTCAACGACGG
TAGTCTGGGCTCCTTGCTTCCCTACGTCCTCGAGACGTATCACGTTAGTA
CCGGCCTGGTAATTATCGTGTATGTCCTCCCCCCAATGGAGCCCAAACGC
ACCATCCCACGGTCAACCCAATCACTGATGGCTTTGCTAGTTATGTTACA
ACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCACCGCCTGCCA
ATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCGCTACAGGTGC
TGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATTGTACGCCATA
ACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACACCCACGCCAA
TACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTCGGCTTTATCC
ATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGTGGCCACCGCT
GTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCTACATCTTCCC
ACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATAGCCTTCCGTG
ACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAGCGACGACCCG
CAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAAGGGAGATCAA
GGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTCTACTTTTTCT
TTTTCCTGGGAGCGGCCATCACGGCCGGTGGTAGGTGAAATCACATCTCA
CAGGCCGAAAGGAAACTCACAACGAGATAGGATGGATTGTCGAGTACCTT
GTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATATCCCGACTGG
GTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCTGAGCCTACTT
ATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGCTCTGTGTGCC
GGGTTGGAGCTGGTATTTTGGCTGTTAGTTCACCCAATGTTGCTTTAGAC
TCTCATCGACTGACGAATAGCATAGGGTGCCCAATATTGGTGTGGAAGCT
ATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTTGCAACGGT
GGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGACTTCTTAATAGG
GAATATCCGTCGCATCCAAGATCTTTCCGGCTAACATTCGCTCCTCCGGC
ATTGGTACGTGAAATTTACCACGATCTAACAAGCAACGTGTTAATAGTAT
TTTTCAGCATTTGTCTTCGTGCTGGGGCAGATTGGCGGATCGCTCTTCCC
CGTATTGACGGGAATCATCTCTTCCCACACCGGCGTCAAGGCCCTGCAGC
CCATGTTATTGGCTCTGCTGTGTGCCACGGGCATCAGCTGGCTGTTGGTG
CCCAAGGCGCCGAGGCTGCGTGCAGACTGATCGACAAACCAGAAAGCAAC
TGTGGTTTCCGGATACAGTTCACATCTATTGAACCTGCTCTACGCTTTAT
GTGATCTTACGTCGCTTAGGTAGAAACATTCATCCGATTGCACTGGCATT
CTCCTAAGTAGCATAAATGGAAGTACTGATCAATAGGTTTTTGAAACTGT
GCTTGCAGCAGCTATTCCACCAGCTAGACCTTCCTGCTACAGCCACTTTA
TGTGGCCGGACAAGCCCTTGACGATGCTAGTGAGGGACGCAGTCTTTCTT
GGAATCCTTAAGCAGATAGACCACGATCTTAACGCTTATACCCACCATCG
CCAGCGAGATTCAAATGAGGAGTGGGAGGTCTTTTACAGAACAGTCAAGA
GAGATGGTGTCTTCTAGATATATAGCAAATAGCGCTTTATAAGGCATGTC
TGTTGAAGGTGGGCTGATCAGCCCGTACTGGGAATGGCTACGGCGTCAAA
GACGTGGAGTAAATGG back to topCoding sequence (CDS) from alignment at ch7:92685..94850+ >KJC3_009316-T1 ID=KJC3_009316-T1|Name=KJC3_009316-T1|organism=Aspergillus niger KJC3|type=CDS|length=4608bp|location=Sequence derived from alignment at ch7:92685..94850+ (Aspergillus niger KJC3)
ATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACTCGGGGA
GCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTTCGGTTA
CCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCGGGCTTC
TCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTTGCTTCC
CTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTATCGTTT
ATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCACC
GCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCGCT
ACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATTGT
ACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACACC
CACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTCGG
CTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGTGG
CCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCTAC
ATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATAGC
CTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAGCG
ACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAAGG
GAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTCTA
CTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGATTGTCG
AGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATATC
CCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCTGA
GCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGCTC
TGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATTGGTGTG
GAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTTGC
AACGGTGGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGACTTCTT
AAATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACTCGGG
GAGCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTTCGGT
TACCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCGGGCT
TCTCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTTGCTT
CCCTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTATCGT
TTATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAGCA
CCGCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTGCG
CTACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCATT
GTACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGACA
CCCACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGCTC
GGCTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTAGT
GGCCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTTCT
ACATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGATA
GCCTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAAAG
CGACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGTAA
GGGAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTCTC
TACTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGATTGT
CGAGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTATA
TCCCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTGCT
GAGCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCTGC
TCTGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATTGGTG
TGGAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCTTT
GCAACGGTGGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGACTTC
TTAAATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACTCG
GGGAGCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTTCG
GTTACCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCGGG
CTTCTCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTTGC
TTCCCTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTATC
GTTTATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAATAG
CACCGCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGCTG
CGCTACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCCCA
TTGTACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAATGA
CACCCACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATGGC
TCGGCTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCTTA
GTGGCCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTGTT
CTACATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATTGA
TAGCCTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCCAA
AGCGACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCAGT
AAGGGAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAGTC
TCTACTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGATT
GTCGAGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGCTA
TATCCCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCTTG
CTGAGCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACGCT
GCTCTGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATTGG
TGTGGAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATTCT
TTGCAACGGTGGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGACT
TCTTAAATGGCGTCCACTACGGGGTGCGAATCCATCTCACTTACCGAACT
CGGGGAGCGGCCAATCCCGATGGTGCCAGAAGGCCCCAACAATGATGCTT
CGGTTACCGAGGCTGAGGCCAAAGTCCCTTACTTGAAGCTCATCGCATCG
GGCTTCTCCTTCTTCGTCGCAGGTGTCAACGACGGTAGTCTGGGCTCCTT
GCTTCCCTACGTCCTCGAGACGTATCACGTTAGTACCGGCCTGGTAATTA
TCGTTTATGTTACAACTCTTGTTGGCTGGCTTGTGGCCGCCCTGACCAAT
AGCACCGCCTGCCAATACCTCGGTTTAGGTGCCATGCTCGCTCTGGGGGC
TGCGCTACAGGTGCTGGCCCATGTCCTGCGTGTCTGGCTTCCGCCGTTCC
CATTGTACGCCATAACTTTCTTCCTAGCGAGTCTAGGACAGGCATTTAAT
GACACCCACGCCAATACATATGTCGCTGCAGTCAAGGCCGCCCATCGATG
GCTCGGCTTTATCCATGCCATGTACATGGCCGGATGTCTGGTGGGCCCCT
TAGTGGCCACCGCTGTGGCATCTGCTAATCGGCAGTCTCAGTGGAATTTG
TTCTACATCTTCCCACTGGGGCTGGGGCTAATCAACCTGATATTGATATT
GATAGCCTTCCGTGACAGCATGTCCGTCCAACATTCCTCAGAAGCCCCCC
AAAGCGACGACCCGCAGCCTTCAAGCCAGGACGCTCGGAGTACGCGCGCA
GTAAGGGAGATCAAGGACACACTTCGCGTCCCAGCTGTCTGGCTGACAAG
TCTCTACTTTTTCTTTTTCCTGGGAGCGGCCATCACGGCCGGTGGATGGA
TTGTCGAGTACCTTGTTCGCGTTCGGCATGGTGATGTGCACCAGATGGGC
TATATCCCGACTGGGTTCTATGGCGGAGCTTTCCTTGGTCGACTGGTCCT
TGCTGAGCCTACTTATCGTCTAGGAGAGCGTCGCATGATATTTATCTACG
CTGCTCTGTGTGCCGGGTTGGAGCTGGTATTTTGGCTGGTGCCCAATATT
GGTGTGGAAGCTATGGCTATTTGCTTGTTGGGATTCTTTTCCGGGCCATT
CTTTGCAACGGTGGGCTCTGTCGTATTTCACTATGGATCCAATTGCCTGA
CTTCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009316-T1.utr5p1 | KJC3_009316-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009316-T1.utr3p1 | KJC3_009316-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:92685..94850 + |
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