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KJC3_009336-T1, KJC3_009336-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009336-T1
Unique NameKJC3_009336-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:139329..140489+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009336-T1 ID=KJC3_009336-T1|Name=KJC3_009336-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1161bp|location=Sequence derived from alignment at ch7:139329..140489+ (Aspergillus niger KJC3)
ACTTTTTGTAGACTGAGCATTGACTATATCGCTTGCTCTGGTCAACCTAC
ACAATAGAATACTGTCCTGACAATCTATTCGGCTTAGCAAAATACCTCAC
CATGACCGACAGCGAAATAACGGGATTTCAATCCCACCACAAAGAGTTCA
CAACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCGCAGAACACCGC
GACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCGGAGACAAACAA
CCTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGGCAGCAAAACCC
AGCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCAGCCCCATCACC
TACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGCGGCATCAACTA
CGACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCATGACCCAGCCTA
GTGGACTGTATCGCATGTCCATCACTGCCCCGTACACAACGGAACTGCTC
AAGGGTGACTTCTTCGGCCGGCCCTTCAACTCGGTCAATGACGTGGTCGT
GCATACTGATGGCTCCATCTGGTTCACCGATCCCATTTACGGCTACAGGC
ATGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGTACCGGTGGTGT
CCGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTTGGAATGCCGAA
TGGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATATCACGGATACGG
ACCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGGCATCTTCTATG
TATGTCTTGTTTCATCCTATAGTGTTGTCGGGGTGTCTGCTAATTAGGGT
GTAGCTATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCACC
AACCGTCGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTAA
GTGCGACCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCATG
TGTGGTCCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGGG
GTGGCCAACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATGA
GCACCGCCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTAC
TTGGTCTGTAG
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Coding sequence (CDS) from alignment at ch7:139329..140489+

>KJC3_009336-T1 ID=KJC3_009336-T1|Name=KJC3_009336-T1|organism=Aspergillus niger KJC3|type=CDS|length=2010bp|location=Sequence derived from alignment at ch7:139329..140489+ (Aspergillus niger KJC3)
ATGACCGACAGCGAAATAACGGGATTTCAATCCCACCACAAAGAGTTCAC
AACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCGCAGAACACCGCG
ACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCGGAGACAAACAAC
CTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGGCAGCAAAACCCA
GCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCAGCCCCATCACCT
ACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGCGGCATCAACTAC
GACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCATGACCCAGCCTAG
TGGACTGTATCGCATGTCCATCACTGCCCCGTACACAACGGAACTGCTCA
AGGGTGACTTCTTCGGCCGGCCCTTCAACTCGGTCAATGACGTGGTCGTG
CATACTGATGGCTCCATCTGGTTCACCGATCCCATTTACGGCTACAGGCA
TGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGTACCGGTGGTGTC
CGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTTGGAATGCCGAAT
GGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATATCACGGATACGGA
CCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGGCATCTTCTATCT
ATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCACCAACCGT
CGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTAAGTGCGA
CCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCATGTGTGGT
CCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGGGGTGGCC
AACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATGAGCACCG
CCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTACTTGGTC
TGTAGATGACCGACAGCGAAATAACGGGATTTCAATCCCACCACAAAGAG
TTCACAACAATCACCGGTCAAACCCCCTCCCTCGAACTACTCGCAGAACA
CCGCGACTACCCCTTTGCACACGAAGCCGGAATCTACATCCCGGAGACAA
ACAACCTCTGGATCACCAGCAACCGATGCGTCGACCCAAATGGCAGCAAA
ACCCAGCAAAGAGTCTACATCACCCGCGTTGACCTGAATACCAGCCCCAT
CACCTACGAGGAGATCCCCACCGACATCCCCATGGGCAATGGCGGCATCA
ACTACGACAAAGATAGCATCCTCATCTGCGGGCAGGGGTCCATGACCCAG
CCTAGTGGACTGTATCGCATGTCCATCACTGCCCCGTACACAACGGAACT
GCTCAAGGGTGACTTCTTCGGCCGGCCCTTCAACTCGGTCAATGACGTGG
TCGTGCATACTGATGGCTCCATCTGGTTCACCGATCCCATTTACGGCTAC
AGGCATGAGTATCGTCCGGAACCGTGTCTACCGTGTCAGGTGTACCGGTG
GTGTCCGCGCGAAGGGACTATTCGCGCTATGGCTGATGGCTTTGGAATGC
CGAATGGGATCTGTTTCTCCCCGGATGAGAAGACGGTTTATATCACGGAT
ACGGACCGGTTGCATGGGGATGGTACGGTGTTTGATCATCGGGCATCTTC
TATCTATGCCTTCGACGTGTCCACGATACATGGACAGCCATTCCTCACCA
ACCGTCGGCTCTTCGCCATGGCCGATCACGGTATCCCCGACGGTATTAAG
TGCGACCTCAATGGAAACGTATACAGTGGTTGCGGGGATGGAATCCATGT
GTGGTCCCCCGGGGGTGTTCTCCTCGGTCGCATCCTCATCGATGGCGGGG
TGGCCAACTTCTGTTTTGGCAGAAACGGGGAGATCTTTGCGCTCAATGAG
CACCGCCTATGGAGGGTCCAGCTCGGGGCTGGTGTCAAGGGGGCATTACT
TGGTCTGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009336KJC3_009336Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009336-T1.utr5p1KJC3_009336-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009336-T1.exon1KJC3_009336-T1.exon1Aspergillus niger KJC3exon
KJC3_009336-T1.exon2KJC3_009336-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009336-T1.cdsKJC3_009336-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009336-T1KJC3_009336-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011042
DBxrefInterPro:IPR013658
DBxrefPFAM:PF08450
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:139329..140489 +
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