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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:168984..171044+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009350-T1 ID=KJC3_009350-T1|Name=KJC3_009350-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2061bp|location=Sequence derived from alignment at ch7:168984..171044+ (Aspergillus niger KJC3)
ATTGCACCTAGGCATATATATTTGGAGGCTAGACAGCTATATGGATTCCA
CTCGCACGCAGGCACACTCTATGTCACCGAATCAGTGCTCTCGGCGGCCG
TCATCACCATGAGTAACTTGCGAGATAGTGAAACCAGCAGCCAGATCTCC
CAAACACTAGAGGTGACGGATTAACACAAATTTCTTCCTAAATATTGCAG
GAAGGGTAGCTGACTGTTGATCCCAATCAGGCTGATGTTGAAAAATGCCC
GGGGCAGCTTCCGTCCATGGGACAGGGCAAAGTCTTTCCTCCTGCCCTGC
CGAATCGGGAAGACTATGTCGTCGATTTCGATGGCCCCGACGATCCAGAA
CATCCTTTCAATTGGCCACTTCCTACCAAGTATGCTACTCCTGTACTCAG
TACTCACCGGACTCTCGCTTACTTCCTCCATTCTAGACTCCTCATCTCGA
CGATAGCCTGCTTTGCCACGTTTATCCCTTCATTCGCCAGTGGAGTCTTT
GCACCCGGCTCCGAAGAAGCAGCCAAGGCTTTCAATGTAGGATCTGAAGT
TGGCATTCTCGGTACAACCCTCTTCGTTCTAGGATTCGCCTCCGGTCCTG
TCCTTTGGGCCCCCGCTTCGGAGCTGTTTGGAAGAAGATGGCCATTGACA
CTGGGCTTACTCGGAGGTGCCGTGTTCACCATTGCATCCGCTATCTCCAA
AGACATCCAGACGCTCATTATTTGTCGCTTCTTTGCGGGGATGTTTGGGG
CCAGCCCACTCGCGGTGGTTCCTGCTGTGCTCTCGGACATTTGGAACAAT
TCGCACCGCGGGGCGGCTATCTCCGTGTATGCGCTCTTCGTGTTCGTGGG
TCCGTTGAGTGCCCCCTTTATTGGAGGCTTCATCACTGCCAGCTCGCTCG
GATGGCGGTGGACCCTGTATATTCCGGCGTTTGTTGGCTTTGCTTGGGGT
GCTATCAGCGTGTTCTTCTTGAGAGAGACCTACGCGTCTTGCCTTCTCCT
GTCGAAAGCAGTCACTCTACGGCGGCTAACTGGTAATTGGGGTGTTCATG
CTAAACAGGAGGAGGTCGAGGTGGACATACAGCAGCTGATTCAGAAATAT
TTCACCCGTCCGCTGCGTATGCTGGTAACTGAGCCTATCATTTTGGTTAT
CTCCCTCTATATGTCCTTCATCTATGGGATTGTGTATGCGCTTCTTGAAG
CGTACCCGTATGTTTTTGAGTCCGTTTACGGCATGAGCATGGGGATCGAT
GGCCTTCCCTTTATTGGCATCATTATTGGGCAGCTGGCTGCTTGTGGGTT
CATTCTCTCGCAGCAGTCCGCCTATGTGAAGAAATTGGCTGCCAACAACA
ACGTTCCCATACCAGAATGGCGATTGGAAATCGTTGTGATTGGGGCTCCT
GTGTTCACGGCCGGAATCTTCTGGTGAGTCATTTCAGAGCTTCATGGATT
GAAATCATTGCTAATTATTGCTACAGGTTCAGCTGGACTGGCTTTACCGC
CAGCATTCACTGGATGGCTCCCACTGCGGCAGGCGTACTGATCGGGTTCG
GAATTCTCTGCATTTTCCTACCCTGCTTCAATTATTTAGTCGATTCTTTT
CTTCCCGTGTAGGTGTGGTCTGCGTCGTGATGGAAGAAGAGTGTGATACT
GACGCAGTATAGGGCTGCCTCTACCGTGGCTGCAAATATCATCCTCCGAT
CCAGCGTTGCGGCAGGTTTCCCACTTTTCTCGAAGCAGATGTTCGCGAAC
CTGGGGGTGCAGTGGGCGGGAACACTGCTGGGATGTCTGTCGGCGATCAT
GATCCCTATTCCGTTTCTATTCCGAGCATATGGACCCAGGTTGAGAGGGG
AAGGCAAGCAAAACAGCCGGTGAGTTCTGCAGCGAATCTGGGGGTATTGC
GGGTAGGATGGAAGAGGCTTCAATTGACTACTCCTCTACACTGGCACTGT
GGCCCTTGATTCCGGTCGTGGAAGGCTTTATAGCGTACGCACAGTTGCAT
GTCTACGCTTGAGGTTGATCTAGTGACTCCTAACTGGAAATTGATGAGGA
GGCAGGAGGGC back to topCoding sequence (CDS) from alignment at ch7:168984..171044+ >KJC3_009350-T1 ID=KJC3_009350-T1|Name=KJC3_009350-T1|organism=Aspergillus niger KJC3|type=CDS|length=7350bp|location=Sequence derived from alignment at ch7:168984..171044+ (Aspergillus niger KJC3)
ATGAGTAACTTGCGAGATAGTGAAACCAGCAGCCAGATCTCCCAAACACT
AGAGGCTGATGTTGAAAAATGCCCGGGGCAGCTTCCGTCCATGGGACAGG
GCAAAGTCTTTCCTCCTGCCCTGCCGAATCGGGAAGACTATGTCGTCGAT
TTCGATGGCCCCGACGATCCAGAACATCCTTTCAATTGGCCACTTCCTAC
CAAACTCCTCATCTCGACGATAGCCTGCTTTGCCACGTTTATCCCTTCAT
TCGCCAGTGGAGTCTTTGCACCCGGCTCCGAAGAAGCAGCCAAGGCTTTC
AATGTAGGATCTGAAGTTGGCATTCTCGGTACAACCCTCTTCGTTCTAGG
ATTCGCCTCCGGTCCTGTCCTTTGGGCCCCCGCTTCGGAGCTGTTTGGAA
GAAGATGGCCATTGACACTGGGCTTACTCGGAGGTGCCGTGTTCACCATT
GCATCCGCTATCTCCAAAGACATCCAGACGCTCATTATTTGTCGCTTCTT
TGCGGGGATGTTTGGGGCCAGCCCACTCGCGGTGGTTCCTGCTGTGCTCT
CGGACATTTGGAACAATTCGCACCGCGGGGCGGCTATCTCCGTGTATGCG
CTCTTCGTGTTCGTGGGTCCGTTGAGTGCCCCCTTTATTGGAGGCTTCAT
CACTGCCAGCTCGCTCGGATGGCGGTGGACCCTGTATATTCCGGCGTTTG
TTGGCTTTGCTTGGGGTGCTATCAGCGTGTTCTTCTTGAGAGAGACCTAC
GCGTCTTGCCTTCTCCTGTCGAAAGCAGTCACTCTACGGCGGCTAACTGG
TAATTGGGGTGTTCATGCTAAACAGGAGGAGGTCGAGGTGGACATACAGC
AGCTGATTCAGAAATATTTCACCCGTCCGCTGCGTATGCTGGTAACTGAG
CCTATCATTTTGGTTATCTCCCTCTATATGTCCTTCATCTATGGGATTGT
GTATGCGCTTCTTGAAGCGTACCCGTATGTTTTTGAGTCCGTTTACGGCA
TGAGCATGGGGATCGATGGCCTTCCCTTTATTGGCATCATTATTGGGCAG
CTGGCTGCTTGTGGGTTCATTCTCTCGCAGCAGTCCGCCTATGTGAAGAA
ATTGGCTGCCAACAACAACGTTCCCATACCAGAATGGCGATTGGAAATCG
TTGTGATTGGGGCTCCTGTGTTCACGGCCGGAATCTTCTGGTTCAGCTGG
ACTGGCTTTACCGCCAGCATTCACTGGATGGCTCCCACTGCGGCAGGCGT
ACTGATCGGGGCTGCCTCTACCGTGGCTGCAAATATCATCCTCCGATCCA
GCGTTGCGGCAGGTTTCCCACTTTTCTCGAAGCAGATGTTCGCGAACCTG
GGGGTGCAGTGGGCGGGAACACTGCTGGGATGTCTGTCGGCGATCATGAT
CCCTATTCCGTTTCTATTCCGAGCATATGGACCCAGGTTGAGAGGGGAAG
GCAAGCAAAACAGCCGGTGAATGAGTAACTTGCGAGATAGTGAAACCAGC
AGCCAGATCTCCCAAACACTAGAGGCTGATGTTGAAAAATGCCCGGGGCA
GCTTCCGTCCATGGGACAGGGCAAAGTCTTTCCTCCTGCCCTGCCGAATC
GGGAAGACTATGTCGTCGATTTCGATGGCCCCGACGATCCAGAACATCCT
TTCAATTGGCCACTTCCTACCAAACTCCTCATCTCGACGATAGCCTGCTT
TGCCACGTTTATCCCTTCATTCGCCAGTGGAGTCTTTGCACCCGGCTCCG
AAGAAGCAGCCAAGGCTTTCAATGTAGGATCTGAAGTTGGCATTCTCGGT
ACAACCCTCTTCGTTCTAGGATTCGCCTCCGGTCCTGTCCTTTGGGCCCC
CGCTTCGGAGCTGTTTGGAAGAAGATGGCCATTGACACTGGGCTTACTCG
GAGGTGCCGTGTTCACCATTGCATCCGCTATCTCCAAAGACATCCAGACG
CTCATTATTTGTCGCTTCTTTGCGGGGATGTTTGGGGCCAGCCCACTCGC
GGTGGTTCCTGCTGTGCTCTCGGACATTTGGAACAATTCGCACCGCGGGG
CGGCTATCTCCGTGTATGCGCTCTTCGTGTTCGTGGGTCCGTTGAGTGCC
CCCTTTATTGGAGGCTTCATCACTGCCAGCTCGCTCGGATGGCGGTGGAC
CCTGTATATTCCGGCGTTTGTTGGCTTTGCTTGGGGTGCTATCAGCGTGT
TCTTCTTGAGAGAGACCTACGCGTCTTGCCTTCTCCTGTCGAAAGCAGTC
ACTCTACGGCGGCTAACTGGTAATTGGGGTGTTCATGCTAAACAGGAGGA
GGTCGAGGTGGACATACAGCAGCTGATTCAGAAATATTTCACCCGTCCGC
TGCGTATGCTGGTAACTGAGCCTATCATTTTGGTTATCTCCCTCTATATG
TCCTTCATCTATGGGATTGTGTATGCGCTTCTTGAAGCGTACCCGTATGT
TTTTGAGTCCGTTTACGGCATGAGCATGGGGATCGATGGCCTTCCCTTTA
TTGGCATCATTATTGGGCAGCTGGCTGCTTGTGGGTTCATTCTCTCGCAG
CAGTCCGCCTATGTGAAGAAATTGGCTGCCAACAACAACGTTCCCATACC
AGAATGGCGATTGGAAATCGTTGTGATTGGGGCTCCTGTGTTCACGGCCG
GAATCTTCTGGTTCAGCTGGACTGGCTTTACCGCCAGCATTCACTGGATG
GCTCCCACTGCGGCAGGCGTACTGATCGGGGCTGCCTCTACCGTGGCTGC
AAATATCATCCTCCGATCCAGCGTTGCGGCAGGTTTCCCACTTTTCTCGA
AGCAGATGTTCGCGAACCTGGGGGTGCAGTGGGCGGGAACACTGCTGGGA
TGTCTGTCGGCGATCATGATCCCTATTCCGTTTCTATTCCGAGCATATGG
ACCCAGGTTGAGAGGGGAAGGCAAGCAAAACAGCCGGTGAATGAGTAACT
TGCGAGATAGTGAAACCAGCAGCCAGATCTCCCAAACACTAGAGGCTGAT
GTTGAAAAATGCCCGGGGCAGCTTCCGTCCATGGGACAGGGCAAAGTCTT
TCCTCCTGCCCTGCCGAATCGGGAAGACTATGTCGTCGATTTCGATGGCC
CCGACGATCCAGAACATCCTTTCAATTGGCCACTTCCTACCAAACTCCTC
ATCTCGACGATAGCCTGCTTTGCCACGTTTATCCCTTCATTCGCCAGTGG
AGTCTTTGCACCCGGCTCCGAAGAAGCAGCCAAGGCTTTCAATGTAGGAT
CTGAAGTTGGCATTCTCGGTACAACCCTCTTCGTTCTAGGATTCGCCTCC
GGTCCTGTCCTTTGGGCCCCCGCTTCGGAGCTGTTTGGAAGAAGATGGCC
ATTGACACTGGGCTTACTCGGAGGTGCCGTGTTCACCATTGCATCCGCTA
TCTCCAAAGACATCCAGACGCTCATTATTTGTCGCTTCTTTGCGGGGATG
TTTGGGGCCAGCCCACTCGCGGTGGTTCCTGCTGTGCTCTCGGACATTTG
GAACAATTCGCACCGCGGGGCGGCTATCTCCGTGTATGCGCTCTTCGTGT
TCGTGGGTCCGTTGAGTGCCCCCTTTATTGGAGGCTTCATCACTGCCAGC
TCGCTCGGATGGCGGTGGACCCTGTATATTCCGGCGTTTGTTGGCTTTGC
TTGGGGTGCTATCAGCGTGTTCTTCTTGAGAGAGACCTACGCGTCTTGCC
TTCTCCTGTCGAAAGCAGTCACTCTACGGCGGCTAACTGGTAATTGGGGT
GTTCATGCTAAACAGGAGGAGGTCGAGGTGGACATACAGCAGCTGATTCA
GAAATATTTCACCCGTCCGCTGCGTATGCTGGTAACTGAGCCTATCATTT
TGGTTATCTCCCTCTATATGTCCTTCATCTATGGGATTGTGTATGCGCTT
CTTGAAGCGTACCCGTATGTTTTTGAGTCCGTTTACGGCATGAGCATGGG
GATCGATGGCCTTCCCTTTATTGGCATCATTATTGGGCAGCTGGCTGCTT
GTGGGTTCATTCTCTCGCAGCAGTCCGCCTATGTGAAGAAATTGGCTGCC
AACAACAACGTTCCCATACCAGAATGGCGATTGGAAATCGTTGTGATTGG
GGCTCCTGTGTTCACGGCCGGAATCTTCTGGTTCAGCTGGACTGGCTTTA
CCGCCAGCATTCACTGGATGGCTCCCACTGCGGCAGGCGTACTGATCGGG
GCTGCCTCTACCGTGGCTGCAAATATCATCCTCCGATCCAGCGTTGCGGC
AGGTTTCCCACTTTTCTCGAAGCAGATGTTCGCGAACCTGGGGGTGCAGT
GGGCGGGAACACTGCTGGGATGTCTGTCGGCGATCATGATCCCTATTCCG
TTTCTATTCCGAGCATATGGACCCAGGTTGAGAGGGGAAGGCAAGCAAAA
CAGCCGGTGAATGAGTAACTTGCGAGATAGTGAAACCAGCAGCCAGATCT
CCCAAACACTAGAGGCTGATGTTGAAAAATGCCCGGGGCAGCTTCCGTCC
ATGGGACAGGGCAAAGTCTTTCCTCCTGCCCTGCCGAATCGGGAAGACTA
TGTCGTCGATTTCGATGGCCCCGACGATCCAGAACATCCTTTCAATTGGC
CACTTCCTACCAAACTCCTCATCTCGACGATAGCCTGCTTTGCCACGTTT
ATCCCTTCATTCGCCAGTGGAGTCTTTGCACCCGGCTCCGAAGAAGCAGC
CAAGGCTTTCAATGTAGGATCTGAAGTTGGCATTCTCGGTACAACCCTCT
TCGTTCTAGGATTCGCCTCCGGTCCTGTCCTTTGGGCCCCCGCTTCGGAG
CTGTTTGGAAGAAGATGGCCATTGACACTGGGCTTACTCGGAGGTGCCGT
GTTCACCATTGCATCCGCTATCTCCAAAGACATCCAGACGCTCATTATTT
GTCGCTTCTTTGCGGGGATGTTTGGGGCCAGCCCACTCGCGGTGGTTCCT
GCTGTGCTCTCGGACATTTGGAACAATTCGCACCGCGGGGCGGCTATCTC
CGTGTATGCGCTCTTCGTGTTCGTGGGTCCGTTGAGTGCCCCCTTTATTG
GAGGCTTCATCACTGCCAGCTCGCTCGGATGGCGGTGGACCCTGTATATT
CCGGCGTTTGTTGGCTTTGCTTGGGGTGCTATCAGCGTGTTCTTCTTGAG
AGAGACCTACGCGTCTTGCCTTCTCCTGTCGAAAGCAGTCACTCTACGGC
GGCTAACTGGTAATTGGGGTGTTCATGCTAAACAGGAGGAGGTCGAGGTG
GACATACAGCAGCTGATTCAGAAATATTTCACCCGTCCGCTGCGTATGCT
GGTAACTGAGCCTATCATTTTGGTTATCTCCCTCTATATGTCCTTCATCT
ATGGGATTGTGTATGCGCTTCTTGAAGCGTACCCGTATGTTTTTGAGTCC
GTTTACGGCATGAGCATGGGGATCGATGGCCTTCCCTTTATTGGCATCAT
TATTGGGCAGCTGGCTGCTTGTGGGTTCATTCTCTCGCAGCAGTCCGCCT
ATGTGAAGAAATTGGCTGCCAACAACAACGTTCCCATACCAGAATGGCGA
TTGGAAATCGTTGTGATTGGGGCTCCTGTGTTCACGGCCGGAATCTTCTG
GTTCAGCTGGACTGGCTTTACCGCCAGCATTCACTGGATGGCTCCCACTG
CGGCAGGCGTACTGATCGGGGCTGCCTCTACCGTGGCTGCAAATATCATC
CTCCGATCCAGCGTTGCGGCAGGTTTCCCACTTTTCTCGAAGCAGATGTT
CGCGAACCTGGGGGTGCAGTGGGCGGGAACACTGCTGGGATGTCTGTCGG
CGATCATGATCCCTATTCCGTTTCTATTCCGAGCATATGGACCCAGGTTG
AGAGGGGAAGGCAAGCAAAACAGCCGGTGAATGAGTAACTTGCGAGATAG
TGAAACCAGCAGCCAGATCTCCCAAACACTAGAGGCTGATGTTGAAAAAT
GCCCGGGGCAGCTTCCGTCCATGGGACAGGGCAAAGTCTTTCCTCCTGCC
CTGCCGAATCGGGAAGACTATGTCGTCGATTTCGATGGCCCCGACGATCC
AGAACATCCTTTCAATTGGCCACTTCCTACCAAACTCCTCATCTCGACGA
TAGCCTGCTTTGCCACGTTTATCCCTTCATTCGCCAGTGGAGTCTTTGCA
CCCGGCTCCGAAGAAGCAGCCAAGGCTTTCAATGTAGGATCTGAAGTTGG
CATTCTCGGTACAACCCTCTTCGTTCTAGGATTCGCCTCCGGTCCTGTCC
TTTGGGCCCCCGCTTCGGAGCTGTTTGGAAGAAGATGGCCATTGACACTG
GGCTTACTCGGAGGTGCCGTGTTCACCATTGCATCCGCTATCTCCAAAGA
CATCCAGACGCTCATTATTTGTCGCTTCTTTGCGGGGATGTTTGGGGCCA
GCCCACTCGCGGTGGTTCCTGCTGTGCTCTCGGACATTTGGAACAATTCG
CACCGCGGGGCGGCTATCTCCGTGTATGCGCTCTTCGTGTTCGTGGGTCC
GTTGAGTGCCCCCTTTATTGGAGGCTTCATCACTGCCAGCTCGCTCGGAT
GGCGGTGGACCCTGTATATTCCGGCGTTTGTTGGCTTTGCTTGGGGTGCT
ATCAGCGTGTTCTTCTTGAGAGAGACCTACGCGTCTTGCCTTCTCCTGTC
GAAAGCAGTCACTCTACGGCGGCTAACTGGTAATTGGGGTGTTCATGCTA
AACAGGAGGAGGTCGAGGTGGACATACAGCAGCTGATTCAGAAATATTTC
ACCCGTCCGCTGCGTATGCTGGTAACTGAGCCTATCATTTTGGTTATCTC
CCTCTATATGTCCTTCATCTATGGGATTGTGTATGCGCTTCTTGAAGCGT
ACCCGTATGTTTTTGAGTCCGTTTACGGCATGAGCATGGGGATCGATGGC
CTTCCCTTTATTGGCATCATTATTGGGCAGCTGGCTGCTTGTGGGTTCAT
TCTCTCGCAGCAGTCCGCCTATGTGAAGAAATTGGCTGCCAACAACAACG
TTCCCATACCAGAATGGCGATTGGAAATCGTTGTGATTGGGGCTCCTGTG
TTCACGGCCGGAATCTTCTGGTTCAGCTGGACTGGCTTTACCGCCAGCAT
TCACTGGATGGCTCCCACTGCGGCAGGCGTACTGATCGGGGCTGCCTCTA
CCGTGGCTGCAAATATCATCCTCCGATCCAGCGTTGCGGCAGGTTTCCCA
CTTTTCTCGAAGCAGATGTTCGCGAACCTGGGGGTGCAGTGGGCGGGAAC
ACTGCTGGGATGTCTGTCGGCGATCATGATCCCTATTCCGTTTCTATTCC
GAGCATATGGACCCAGGTTGAGAGGGGAAGGCAAGCAAAACAGCCGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009350-T1.utr5p1 | KJC3_009350-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009350-T1.utr3p1 | KJC3_009350-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:168984..171044 + |
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