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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:218068..222941+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009370-T1 ID=KJC3_009370-T1|Name=KJC3_009370-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4874bp|location=Sequence derived from alignment at ch7:218068..222941+ (Aspergillus niger KJC3)
CTTTCTTCATCTTTCTTTTTATTTGTACTATCTGTGCTACCCATATATCC
ACAGAATGTCAGTCGAAGCCTCCCACCCCTCCAGTCGTGCTAGTTTCGTG
ATCGCAATCATATGCCCACTTTCCCTGGAGGCGCAAGTCGCGATACCCCT
CTTTGACACGGTCTATGACAGAACTGTCTATGAGAAATATGGGCCTGTGC
GGAATGACCCCAATCACTATACGCTGGGCCGTATTGGCCGTTACGATGTG
GTTCTGGCCCACATGGGTGGTTGTGGGAAAGCCGAAGCATCCAGCGTGGC
CAGTCATATCAAACAAAGTTATCCGGGCATCGAACTGGCCCTGTTGATAG
GGATCTGCGGAGGAGTGCCTTACAGGACGAATGTGGGTCCAGCACAACCG
AGAAGAGATGTTTTTCTTGGCGATGTGATAGTCAGCGGCGCGATTATTCA
ATATGACTTGGGGAAAAAGTTGCCGCACCGATTTGTGTGCAAGGATACGT
TAGAGTCAAATCTAGGGCGAGCGAGTCAGCAGATCCGGTCATTCATTGAG
ACCCTAAAGTCACGTCATGAAGAATTGTCCAAGGAGCACCAGAAGTATCT
TCAGACTATACGAGATTGCAAAGATGTGCCATATCCTGAACCCAATAGCG
ACATCTTATTTAAGCCTGAATACAAGCATCGCTCACACTGTCAGTGTATG
AGTCATGTCAGTGGGGACGAAAGCGTTGTGGACCGCCGCCGTGTGGACTC
CGATGGGATTCCCTATATCCATTTTGGTCGGCTTGCCTCGGGGGATACCG
TGATGTGCTCTGCCAAAGATCGAGACAAGATTGCCAAGCGCGAAAAAGTT
CTTGGATTTGAGATGGAAGGGGCGGGCGTATGGGACAGTGTCCCTTGCAT
CCTGATCAAAGGAGTAAGCGACTACGCTGATAGCCATAAGAATGATGTAT
GGCAATATTACGCCGCTGCAAGTGCAGCGGCTTGCATGCGTGCTCTCCTG
GATCAGACTCCCATCTCGCCCGCGACGTCATCAGCGGGCCCAGGACAGGG
TATGTAAGCAACCATTGTATCCTTAGTTACAAGTAGGCTCGCTTAGCTGC
GTCCATCAATAAACGTCAATTGACTTTCCTGCAGATACACTTGCTCCCCA
GTTAAATCCGCGAAAAAGACCCGCAGAGCCATCTGAGGTCTCTAGTAACG
AACGGGAAAAAGCGTACCTTGACTTACTAACCTTTCCCCAGGCCCAGTAT
CGCCTGGACGAGATTACCGATCCTCACGATACGACTTGCGCTTGGGTATT
AGAGCGACCAGAATTTAAGACATGGATGAGCGGGGAGGATCTGAAAAGAC
ACGGAGGATTTTTTTGGATCAAAGGGAAGCCAGGAGCCGGAAAGTCGACG
CTCATGAAATACCTTCTTCCAAAAGCAAAGCAATTCGGAAAAGACACAGT
GATCTCGTCTTTCTTCTTCCATGCCCAGGGCGTGGACTTGGAGAGGTCCA
CTGTGGGAATGTATCGTTCCCTCTTGCACCAGCTTCTCTCGTCTACCGCC
ATTCCGTCAAGTGCCAAACAGCCCTACTTCAACTTTGCAGCGAAGATGCT
AAGTCAAGATGACGGGATAACTTGGACGATCCGAGACTTGAAGCATCAGC
TCTTATCGATCATCCGATCTCTGACCAACCACTACGTGTTTGTTTTTATT
GATGCTCTGGATGAATGCGATCAAGACGAGATGGGTGACATGATACCGTT
CCTCGAGCATCTGGGACACTCCGCGAACGCATGCGGGGTTCATTTGAGAA
TCTGCCTGGCAAGCCGACACTATCCACAACTCAGCATTGAACGTGGCATT
GAGTTGGTCCTGGAGTACCAGCAGGAGCATCAAGGCGACATGCGAAAGTA
CGTTGAGACTAAGTTAAGAGGGGGCAAGTCCAAGATGATCCAAGAAATTA
GAGAAGAAATTTGCGCCCGGGCAGCCGGAGTATTCCTCTGGGTTACACTT
GTGGTTCGGTCGCTGAATGATGCGTTTGCCAAGGGCAAACTCCATGCCGT
ACGTCAACGGCTGGATGAGATTCCAGACGGCCTTGACGAGCTTTTCACCG
ATATGCTGACCAGAGACACCAACGACATTAGCGATCTTATCTTCCGTCTT
CAGTTCATATTATTTGCGCACCGTCCGTTATCCAGGGATGAGCTTTACTT
CGCCGTCATGTTTGCTAAAGATGGCTTGATCAAAAGAGACGGCGAATGGC
ACATTGATCCCCACATTGAAAATTTCATCCTCAACATCTCCAAAGGCCTC
GTTGAAACCTCCCGATCTAAATCACGCACTGTGCATTTTATCCACGAGTC
AGTGCGGGATTTCTTACTGCGACGGGACGGTTTCAGCAGACTTCAGGCTG
GGTTGGGCGCGAACGCAGTCGGGAACGCCCATGATGAGCTTGCACAACTC
TGCTTTCGATACATGTGCCAATTCAAGTTGTTAGCCGCGGATGATATTTC
AAAACTCTATGCTTCTCCACGTGCAGCAAAGATAAAGTACGTCGAGTCAG
AAACCCCGTTTCTCGACTACGCTATTCATAGCCTCCTACCTCACAGCAAT
GCGGCCGAGGCTGCAGGTACTTCGCAAGATGCCTTCCTGGCAACGTTCTC
TTTGTCATTCCATGACTTCAAGGACATTCGTAATGCCCTGGAACCTTATC
ACACCCGCCGATATAGGACCAAAGTGACGGCTCTGTATGTCCTGGCAGAA
TTGAATTTGGACCATCTCATCCGCCTAGAGCTCCTACGCACACCGCCGTT
GTGGAAGGAAATGGGAAGGCATCACAGTCCAATGGGTGCCGCTGTCTACG
CGGGTAACACGCTTGCGATTAGAGCCCTGCTTGGCTGCGATCCAAGTGCA
AATACCTCTGCCGACAATTCGCTGCTTAAGCCGGATGTTATTGATCGCAT
GAAGCATTATGTGGTTGGCAGCAAGCAAATTCGGATGCGATCGGGTCATT
CGATGGCCTTGTTTCTGGTGGAGTACGCTATTGAACGTGGCCATGTAGCA
TTATTGAAGCTTCTCCAACAAACCGGCGAAATTGATTTGAACTACAAACT
CAACAATGGTTACCTGCCCCTTATCTATGCGGTCAGGTGTACAAAAGCAG
AAATATTTGAATTTTTGCTCGACAATGCCGGAGTCTATCGTGGCAACCGA
GATGCCAGGATTGGGTTATCCCTGCGTATTGCAATCAGCGAAGGCAAACG
GGATATTTCTAATGTCCTACTTTACCACGCAATGAGTCGCCATTGGATGA
ACTCTTTCGGGGAATGTGCCTTCCATTGGGCAGTAGCCGGAAACCACGGG
CCTACAGTTAGACGGCTCATTGGGCTTGGCTGCAACGTAGCAAACCGCGA
TGGAAGCGGGCGAGATGCCTTATCACATGCCGCCGAACAAGGCAAAGTCG
AGATGGTGAGAATTTTAATTGAAAGCGGAATGGTGGATATAGATGGGAAA
GACGATCAAGGAAGGACGGCTTTCTCATGGGCCGCAGGACCAGACGAACA
TACGCTAAATCATTCCCCTAAGCCAAAACAAGCCTGGGATGATTTGCAGA
AGGAGGTCATGTATGTGCTACTCAGCACAGGATGCGTTGACGTGAACTCC
AGAGATGGATATCAACGGACACCCTTATTCTGGGCTGTTAAGGAAAATAA
GCCAGTGGCAGTGGACATTCTTCTTGAGGCCTCAGACACTGAGGTTGACT
GCAAAAGTTTGACTGGAAAAACGCCACTTTCGGTGGCAGCGGTGCATGGA
CACGTAGCCATGCTACGAAAACTCCTGCAGTCTGGCCTTGCGGATGTCAA
TACTCAGGATAAATTCGGCCGAACACCATTATCTTGGGCTGTTTATCCAT
CCTGTAGTTCTCCACGACCATCAGTGAGACCTTCAGTAACAGAAACCCCG
TCATCTTGCCCCAGGAGAGGGTATAGGCTAGAAATTACCTGGGGGCTTTG
TGCAGTGCCGGTGCTGCTGGATTGGCCTACAATTGATGCCAGCCTTGCTG
ATTGCTTTGGCCATCCACCAATGTGGTGGGCCCATGTTTTCAGGAATCTT
CTGCCTTCATCCCAACATGACGAGCAAGATAAAGTTATCCAGTTGCTCAC
AGCTCATCTATCGAAAAAGGATGAATCTAATAACAACGCGGTTTTGTCAT
CAGATAGGGAAACCCTAGATCGTGAGATCCAGCTGGTTGCAGCGTCCTAT
TCACCGTCTTATGATTGAAGCGTCCTTGAGGCTTTCTGAGTACAGACATA
TTGCTTCAACGATTTCCCTGGGGGCAAGGACCACCTGTAAAGGCTCATGG
AGAACTCTCCACTCATACAACTGAAACGAACATCGTGCAGTGATGAGGTT
GCTCTTTGCTCGTGTACATAATCACATTCAAGCAATAATAACTTATCAAC
CTCAAGGACAGCAGCGAATGACACCCAGGATCAAATCTACTAGGCCCACA
CTTTATGTCCTTGTCATGAGTGAAAGTGCAATATCGATTCGTCCACAAAG
GCGTCCTTGCCCCAGGCTTGCAGGAGACAAGAGACCATCGCCTTCGCACC
TGGCTATCCCCCTTTCTACTGTTTGACAGTCCCAGATACCTATATACTGG
TCTCGATTCCTTCTTATACCAACTTTACTTATATTCAAGCCTTCTGGTTT
AGCTATATACCAAAATCGGCCATGCTCTCGACCACCAGGGTACGAGCTCA
AGCGCCGGCCAAGGACATATGGGCTCAAAGACTGGCCGTGGCGTCGTTCG
TATTTCGGGGTTGTTGGAGACCATGATACCCAATCCAACCGAAAATAAAC
CAAACTCAAAATCTACGTACGTGG back to topCoding sequence (CDS) from alignment at ch7:218068..222941+ >KJC3_009370-T1 ID=KJC3_009370-T1|Name=KJC3_009370-T1|organism=Aspergillus niger KJC3|type=CDS|length=2943bp|location=Sequence derived from alignment at ch7:218068..222941+ (Aspergillus niger KJC3)
ATGAGCGGGGAGGATCTGAAAAGACACGGAGGATTTTTTTGGATCAAAGG
GAAGCCAGGAGCCGGAAAGTCGACGCTCATGAAATACCTTCTTCCAAAAG
CAAAGCAATTCGGAAAAGACACAGTGATCTCGTCTTTCTTCTTCCATGCC
CAGGGCGTGGACTTGGAGAGGTCCACTGTGGGAATGTATCGTTCCCTCTT
GCACCAGCTTCTCTCGTCTACCGCCATTCCGTCAAGTGCCAAACAGCCCT
ACTTCAACTTTGCAGCGAAGATGCTAAGTCAAGATGACGGGATAACTTGG
ACGATCCGAGACTTGAAGCATCAGCTCTTATCGATCATCCGATCTCTGAC
CAACCACTACGTGTTTGTTTTTATTGATGCTCTGGATGAATGCGATCAAG
ACGAGATGGGTGACATGATACCGTTCCTCGAGCATCTGGGACACTCCGCG
AACGCATGCGGGGTTCATTTGAGAATCTGCCTGGCAAGCCGACACTATCC
ACAACTCAGCATTGAACGTGGCATTGAGTTGGTCCTGGAGTACCAGCAGG
AGCATCAAGGCGACATGCGAAAGTACGTTGAGACTAAGTTAAGAGGGGGC
AAGTCCAAGATGATCCAAGAAATTAGAGAAGAAATTTGCGCCCGGGCAGC
CGGAGTATTCCTCTGGGTTACACTTGTGGTTCGGTCGCTGAATGATGCGT
TTGCCAAGGGCAAACTCCATGCCGTACGTCAACGGCTGGATGAGATTCCA
GACGGCCTTGACGAGCTTTTCACCGATATGCTGACCAGAGACACCAACGA
CATTAGCGATCTTATCTTCCGTCTTCAGTTCATATTATTTGCGCACCGTC
CGTTATCCAGGGATGAGCTTTACTTCGCCGTCATGTTTGCTAAAGATGGC
TTGATCAAAAGAGACGGCGAATGGCACATTGATCCCCACATTGAAAATTT
CATCCTCAACATCTCCAAAGGCCTCGTTGAAACCTCCCGATCTAAATCAC
GCACTGTGCATTTTATCCACGAGTCAGTGCGGGATTTCTTACTGCGACGG
GACGGTTTCAGCAGACTTCAGGCTGGGTTGGGCGCGAACGCAGTCGGGAA
CGCCCATGATGAGCTTGCACAACTCTGCTTTCGATACATGTGCCAATTCA
AGTTGTTAGCCGCGGATGATATTTCAAAACTCTATGCTTCTCCACGTGCA
GCAAAGATAAAGTACGTCGAGTCAGAAACCCCGTTTCTCGACTACGCTAT
TCATAGCCTCCTACCTCACAGCAATGCGGCCGAGGCTGCAGGTACTTCGC
AAGATGCCTTCCTGGCAACGTTCTCTTTGTCATTCCATGACTTCAAGGAC
ATTCGTAATGCCCTGGAACCTTATCACACCCGCCGATATAGGACCAAAGT
GACGGCTCTGTATGTCCTGGCAGAATTGAATTTGGACCATCTCATCCGCC
TAGAGCTCCTACGCACACCGCCGTTGTGGAAGGAAATGGGAAGGCATCAC
AGTCCAATGGGTGCCGCTGTCTACGCGGGTAACACGCTTGCGATTAGAGC
CCTGCTTGGCTGCGATCCAAGTGCAAATACCTCTGCCGACAATTCGCTGC
TTAAGCCGGATGTTATTGATCGCATGAAGCATTATGTGGTTGGCAGCAAG
CAAATTCGGATGCGATCGGGTCATTCGATGGCCTTGTTTCTGGTGGAGTA
CGCTATTGAACGTGGCCATGTAGCATTATTGAAGCTTCTCCAACAAACCG
GCGAAATTGATTTGAACTACAAACTCAACAATGGTTACCTGCCCCTTATC
TATGCGGTCAGGTGTACAAAAGCAGAAATATTTGAATTTTTGCTCGACAA
TGCCGGAGTCTATCGTGGCAACCGAGATGCCAGGATTGGGTTATCCCTGC
GTATTGCAATCAGCGAAGGCAAACGGGATATTTCTAATGTCCTACTTTAC
CACGCAATGAGTCGCCATTGGATGAACTCTTTCGGGGAATGTGCCTTCCA
TTGGGCAGTAGCCGGAAACCACGGGCCTACAGTTAGACGGCTCATTGGGC
TTGGCTGCAACGTAGCAAACCGCGATGGAAGCGGGCGAGATGCCTTATCA
CATGCCGCCGAACAAGGCAAAGTCGAGATGGTGAGAATTTTAATTGAAAG
CGGAATGGTGGATATAGATGGGAAAGACGATCAAGGAAGGACGGCTTTCT
CATGGGCCGCAGGACCAGACGAACATACGCTAAATCATTCCCCTAAGCCA
AAACAAGCCTGGGATGATTTGCAGAAGGAGGTCATGTATGTGCTACTCAG
CACAGGATGCGTTGACGTGAACTCCAGAGATGGATATCAACGGACACCCT
TATTCTGGGCTGTTAAGGAAAATAAGCCAGTGGCAGTGGACATTCTTCTT
GAGGCCTCAGACACTGAGGTTGACTGCAAAAGTTTGACTGGAAAAACGCC
ACTTTCGGTGGCAGCGGTGCATGGACACGTAGCCATGCTACGAAAACTCC
TGCAGTCTGGCCTTGCGGATGTCAATACTCAGGATAAATTCGGCCGAACA
CCATTATCTTGGGCTGTTTATCCATCCTGTAGTTCTCCACGACCATCAGT
GAGACCTTCAGTAACAGAAACCCCGTCATCTTGCCCCAGGAGAGGGTATA
GGCTAGAAATTACCTGGGGGCTTTGTGCAGTGCCGGTGCTGCTGGATTGG
CCTACAATTGATGCCAGCCTTGCTGATTGCTTTGGCCATCCACCAATGTG
GTGGGCCCATGTTTTCAGGAATCTTCTGCCTTCATCCCAACATGACGAGC
AAGATAAAGTTATCCAGTTGCTCACAGCTCATCTATCGAAAAAGGATGAA
TCTAATAACAACGCGGTTTTGTCATCAGATAGGGAAACCCTAGATCGTGA
GATCCAGCTGGTTGCAGCGTCCTATTCACCGTCTTATGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009370-T1.utr3p1 | KJC3_009370-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR007111 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF01048 |
| DBxref | PFAM:PF05729 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:218068..222941 + |
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