You are here

Home

KJC3_009401-T2, KJC3_009401-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009401-T2
Unique NameKJC3_009401-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:303599..306001-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009401-T2 ID=KJC3_009401-T2|Name=KJC3_009401-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2403bp|location=Sequence derived from alignment at ch7:303599..306001- (Aspergillus niger KJC3)
GGTGAACCATCATGTGATAGACCTAAGTCTTCGGAACCAACAGCGATGAG
GTACGCGGACAGGCTGAGTGTTGGGTACGCAGAGTGGGGACAATACGATC
AACCAGGAACGCAAAGGAAGCCTCGAGGATCAAGTTTCAGAAACCACATG
GACGAACGGTCAGACCACAATGTTCCACTGACTCTGAACCGGAGTTTAGG
TCCTGACTGAAACAGACATCTTGATGCGCAGCCATCTCATCATCTCATCT
CGTGTCTCGGATATGCTTACTATTCTATTACTACACCACCTCTGACACCA
ACTTCTCCCAAACACCAGACTAATTGATCGTAAGCAACCTGATACTGCGC
GAACTGGTTCCTTATAAGGCAGTGTCCTGGCTGATCCTTATGCAGGGGCA
CTGTACTCCCACGTGGGAAATGCATGGCATTTGAAAAAGCCCAGCTCTGA
AACTGAAATCCGCCGGCTTCACAGTCATTCACCACTCTTTTCATCTCAAA
CCTGACTGCCTTCATACTAAAAAACAAGCCATGTCGGTTCAAACCATCCT
ACTTGCAGCCGCAGGCGGCGCAACACTCCTGGTACGAGCATGATCTCCCT
CTTGGCCCAGTTTATTACCCTCTTTCAAGTCCATCATTAACACCCCAGCA
GATCCTTGGAAGAGTCATTTACCTCCTCTTCCTCCACCCATTGGCCAAAT
TCCCTGGCCCAATTTTCGCTAGCCTCACCCATGGCTACGGCGCTTATCAC
TCCTGGAAAGGCGACGCCCACCTTGACATGTGGCGGCTGCACGAGAAACA
CGGCGACTTCGTACGCTACATGCCCAACTCGGTCTTCATTCGCAACGCAG
ATGCGCTGCACGCCATCTACTCGACGAAAGCATACGCCTCGGTCGTGAAA
AGCCCACACTACGAAGTCCTCCAAGCCGGCAGCGTAGGGAGCACGTTCAG
CTTGCGCGGAGGACACGAACACCTCCGGCGGCGACGCATTGTCTCAACTG
CGCTATCCGAAAAGGCACAGCGTGGAATGGACCCGCGCATTGCGGTGCAT
GTACGCAAGTTCTGCGAGGCCGTGCTCCCGGCACGTCAGGGCGAGCTGGG
GGAGCCGATGAACATGGCCGAGTGGTGCGGCTACCTCACCTTCGACCTGA
TGTCCGACCTTGTGTTCAGCGCAAGTTACAACTTGCTCGGCCGCGAGAAG
TTCCGCTACATGCCTGAGGTCATCGACAAGTCGAACGTACGGATGTCTGT
GCTCGCGTACATGCCTATTCTCGCCGCGTGGCGCGCCGTCGACGGCATCT
TCTTCCGCGATGCCCTCATTGCCCGCAACCGCTTCCTCCGGTTCGTTGTG
CGCGCTGTCCGCGAACGCGCTAATCGCGCCCTGGGTAAGTGGGCGCCCGA
CGCCTTGGACCCCTGCAAGCCCCGCGATGATATCTACAGCGCGTTGGCTA
CAGCCAAGGACCCGGACACGGGCGAGGGATTCAAGCCGTCAGAGATGGTC
AGCGAGAGCACAACGCTGGTGGTGGCCGGGTCCGACACCACCTCGACGGC
GATCGCGGCGACGTTGTTCTACTTGGCGGACAACCGCTTTGCATATGAAA
AGGCAGCGCAGGAGGTACGCACTGTGTTCGCGGGCAAGTCACTGGGGTCT
GAGGAGGCTCTCTCAGGCCCGGAACTCTCACAATGTACCTATCTCCGGGC
GTGTATTGATGAAGCCTTACGCATGAGTCCGCCCAACGGGGCCGCCTTGA
CGAGAGAAGTTCTGCCGGGTGGGTTGACTGTCGGCGACATTCATATTCCG
GGAGGTGTGACGGTTGCGGTGCCACTGTATGCCATCCACCACGATGAGCG
CTACTACGTGGATCCATTCACCTACCGGCCCGAGCGGTGGCTCGAGGATG
ATGGAACTGGCAGCATCAAGCGGGCGAGACTTGTCTTCAACCCCTTCTCG
CTGGGTATGCGCGGCTGTCTTGGTCGCAGCTTGGCCTACCACGAGCTCAT
GACCACGGTAGCCACTGTGTTGTACTTGAGCGATTTCGAGTTCGCCGAGG
GCCCCATGAGCAAGGTCGGCAGGGGAGTGCCGGGGGCGGTGTACGGGCGA
CACCGAGAGAACGAATACCAGTTGCGCGAGCATATCACGGGTCAGAAGGA
TGGCCCATGGCTGCGGTTTTCCAGACGCGAAATTTCTGGCTAGTTGATCC
TACCTTACTTCCTTGTTTTTCTTTTCTCTTTTTTTGTTTAGCAATGAGGG
TCTGTAATCCTACTTCAAAATGAGGGAAGTGGTCTTGGCTTAACCCAAGC
CGGAAGGAGTGTCTTTTGTGCGTTCGGAGATTCGCGGAGTTCTTTAATGT
GTCCTTGATTATACCTGTCTATACTACCTGTGATCATACATTATACCTTG
AAT
back to top

Coding sequence (CDS) from alignment at ch7:303599..306001-

>KJC3_009401-T2 ID=KJC3_009401-T2|Name=KJC3_009401-T2|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch7:303599..306001- (Aspergillus niger KJC3)
ATGTGGCGGCTGCACGAGAAACACGGCGACTTCGTACGCTACATGCCCAA
CTCGGTCTTCATTCGCAACGCAGATGCGCTGCACGCCATCTACTCGACGA
AAGCATACGCCTCGGTCGTGAAAAGCCCACACTACGAAGTCCTCCAAGCC
GGCAGCGTAGGGAGCACGTTCAGCTTGCGCGGAGGACACGAACACCTCCG
GCGGCGACGCATTGTCTCAACTGCGCTATCCGAAAAGGCACAGCGTGGAA
TGGACCCGCGCATTGCGGTGCATGTACGCAAGTTCTGCGAGGCCGTGCTC
CCGGCACGTCAGGGCGAGCTGGGGGAGCCGATGAACATGGCCGAGTGGTG
CGGCTACCTCACCTTCGACCTGATGTCCGACCTTGTGTTCAGCGCAAGTT
ACAACTTGCTCGGCCGCGAGAAGTTCCGCTACATGCCTGAGGTCATCGAC
AAGTCGAACGTACGGATGTCTGTGCTCGCGTACATGCCTATTCTCGCCGC
GTGGCGCGCCGTCGACGGCATCTTCTTCCGCGATGCCCTCATTGCCCGCA
ACCGCTTCCTCCGGTTCGTTGTGCGCGCTGTCCGCGAACGCGCTAATCGC
GCCCTGGGTAAGTGGGCGCCCGACGCCTTGGACCCCTGCAAGCCCCGCGA
TGATATCTACAGCGCGTTGGCTACAGCCAAGGACCCGGACACGGGCGAGG
GATTCAAGCCGTCAGAGATGGTCAGCGAGAGCACAACGCTGGTGGTGGCC
GGGTCCGACACCACCTCGACGGCGATCGCGGCGACGTTGTTCTACTTGGC
GGACAACCGCTTTGCATATGAAAAGGCAGCGCAGGAGGTACGCACTGTGT
TCGCGGGCAAGTCACTGGGGTCTGAGGAGGCTCTCTCAGGCCCGGAACTC
TCACAATGTACCTATCTCCGGGCGTGTATTGATGAAGCCTTACGCATGAG
TCCGCCCAACGGGGCCGCCTTGACGAGAGAAGTTCTGCCGGGTGGGTTGA
CTGTCGGCGACATTCATATTCCGGGAGGTGTGACGGTTGCGGTGCCACTG
TATGCCATCCACCACGATGAGCGCTACTACGTGGATCCATTCACCTACCG
GCCCGAGCGGTGGCTCGAGGATGATGGAACTGGCAGCATCAAGCGGGCGA
GACTTGTCTTCAACCCCTTCTCGCTGGGTATGCGCGGCTGTCTTGGTCGC
AGCTTGGCCTACCACGAGCTCATGACCACGGTAGCCACTGTGTTGTACTT
GAGCGATTTCGAGTTCGCCGAGGGCCCCATGAGCAAGGTCGGCAGGGGAG
TGCCGGGGGCGGTGTACGGGCGACACCGAGAGAACGAATACCAGTTGCGC
GAGCATATCACGGGTCAGAAGGATGGCCCATGGCTGCGGTTTTCCAGACG
CGAAATTTCTGGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037heme binding
GO:0005506iron ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009401KJC3_009401Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009401-T2KJC3_009401-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009401-T2.cdsKJC3_009401-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009401-T2.utr3p1KJC3_009401-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009401-T2.exon3KJC3_009401-T2.exon3Aspergillus niger KJC3exon
KJC3_009401-T2.exon2KJC3_009401-T2.exon2Aspergillus niger KJC3exon
KJC3_009401-T2.exon1KJC3_009401-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009401-T2.utr5p3KJC3_009401-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_009401-T2.utr5p2KJC3_009401-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009401-T2.utr5p1KJC3_009401-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_7.2
DBxrefInterPro:IPR017972
DBxrefInterPro:IPR036396
DBxrefInterPro:IPR001128
DBxrefInterPro:IPR002401
DBxrefPFAM:PF00067
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:303599..306001 -
Powered by Drupal