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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:313452..314530- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009406-T1 ID=KJC3_009406-T1|Name=KJC3_009406-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1079bp|location=Sequence derived from alignment at ch7:313452..314530- (Aspergillus niger KJC3)
ATGCACACACATCCTCTTCCTTGGCATGCAGTCTATCCCACACCTCGGAG
CGCAGCGATCGGTATCCGTCGCGAGGAGGTACTGCACTGGTTTCGCTCGG
GTAGACAGGCCGGGCGTGATTTCATATTAGTAGACCTACGTCGGGCGGAT
TTCGAGGTACACTAGTTGGCTAGGATGAAAGGTGGAGGTAATTGACATTT
ATTTTCAGGGAGGCACCATCCGAGGGTCTATCAACCTTCCCGCCCAGACT
CTATACCCTATGATCCCAACAATCTATTCTCTTCTCAGCCAAAGCCCGGT
TAAGGAGGTTGTCTGGTACTGTGGTCTGTTATCTACCATCACTTCCTTCC
GTAAAGACCGGTAAACATGCTCACTGGCATCAGGTTCATCGAAGGGCCGT
GGAGTGCGGGCCGCGAGTTGGTTTGCCGACTACATTGAGCTACAAGGAGA
GACTCGGTTGAGAAGTCTCGTACTGGAAGGGGGGATTAAAGGATGGGCAA
CAGCAGGGAAAGAATACACGGATTTAATGGATGAGTACGACGCATCCGCA
TGGGCTGAGTAAATATACTACTTTGATGGGTTCTGCCGGTTAAGGGCAGC
AAAGAGAATTGAGTTGCTGTTCTAGACTTTCTATAGTCATTCGGCAAGAT
GAGAGTCCGACACATTATTTACAAAGGAGCACCGGCCGGGCTAAACTTGG
TTGGCGCATTCCTTCATCTCCTTAATCCGCTTCTCTTCCCTCTCACTGAA
CCGATCACCAAAAAGCTCCAGGTGAGGTCGCATGACGATAGTGTATTTCA
CAAACTCCTCCATGCAATCAACCAGCCGGTCGCGGTTACCACTAGGCAGA
AGTCTCTGGTCCCCCGGTTGACCTTCATCTGGGAAATGCGTATATGCCTT
GGGGATAGATGACTGATTTGGAATTGTAAACATGCGCATCCACCTGCCGA
GAATACGTAGGGAATTCACAGCATTGAACGATTGTGAACCGCCGCATACT
TGCGCGATAGCAAGCGTCCGGCCCTGCGTGGGACGTACGCTGCCTGTGGA
CAGCGGGATCCAGTCGATCTGATTCTTGA back to topCoding sequence (CDS) from alignment at ch7:313452..314530- >KJC3_009406-T1 ID=KJC3_009406-T1|Name=KJC3_009406-T1|organism=Aspergillus niger KJC3|type=CDS|length=1350bp|location=Sequence derived from alignment at ch7:313452..314530- (Aspergillus niger KJC3)
GTTCATCGAAGGGCCGTGGAGTGCGGGCCGCGAGTTGGTTTGCCGACTAC
ATTGAGCTACAAGGAGAGACTCGGTTGAGAAGTCTCGTACTGGAAGGGGG
GATTAAAGGATGGGCAACAGCAGGGAAAGAATACACGGATTTAATGGATG
AGTACGACGCATCCGCATGGGCTGAGTAAGGAGGCACCATCCGAGGGTCT
ATCAACCTTCCCGCCCAGACTCTATACCCTATGATCCCAACAATCTATTC
TCTTCTCAGCCAAAGCCCGGTTAAGGAGGTTGTCTGGTACTGTGATGCAC
ACACATCCTCTTCCTTGGCATGCAGTCTATCCCACACCTCGGAGCGCAGC
GATCGGTATCCGTCGCGAGGAGGTACTGCACTGGTTTCGCTCGGGTAGAC
AGGCCGGGCGTGATTTCATATTAGTAGACCTACGTCGGGCGGATTTCGAG
GTTCATCGAAGGGCCGTGGAGTGCGGGCCGCGAGTTGGTTTGCCGACTAC
ATTGAGCTACAAGGAGAGACTCGGTTGAGAAGTCTCGTACTGGAAGGGGG
GATTAAAGGATGGGCAACAGCAGGGAAAGAATACACGGATTTAATGGATG
AGTACGACGCATCCGCATGGGCTGAGTAAGGAGGCACCATCCGAGGGTCT
ATCAACCTTCCCGCCCAGACTCTATACCCTATGATCCCAACAATCTATTC
TCTTCTCAGCCAAAGCCCGGTTAAGGAGGTTGTCTGGTACTGTGATGCAC
ACACATCCTCTTCCTTGGCATGCAGTCTATCCCACACCTCGGAGCGCAGC
GATCGGTATCCGTCGCGAGGAGGTACTGCACTGGTTTCGCTCGGGTAGAC
AGGCCGGGCGTGATTTCATATTAGTAGACCTACGTCGGGCGGATTTCGAG
GTTCATCGAAGGGCCGTGGAGTGCGGGCCGCGAGTTGGTTTGCCGACTAC
ATTGAGCTACAAGGAGAGACTCGGTTGAGAAGTCTCGTACTGGAAGGGGG
GATTAAAGGATGGGCAACAGCAGGGAAAGAATACACGGATTTAATGGATG
AGTACGACGCATCCGCATGGGCTGAGTAAGGAGGCACCATCCGAGGGTCT
ATCAACCTTCCCGCCCAGACTCTATACCCTATGATCCCAACAATCTATTC
TCTTCTCAGCCAAAGCCCGGTTAAGGAGGTTGTCTGGTACTGTGATGCAC
ACACATCCTCTTCCTTGGCATGCAGTCTATCCCACACCTCGGAGCGCAGC
GATCGGTATCCGTCGCGAGGAGGTACTGCACTGGTTTCGCTCGGGTAGAC
AGGCCGGGCGTGATTTCATATTAGTAGACCTACGTCGGGCGGATTTCGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009406-T1.utr3p1 | KJC3_009406-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036873 |
| DBxref | InterPro:IPR001763 |
| DBxref | PFAM:PF00581 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:313452..314530 - |
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