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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:339075..340655- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009418-T1 ID=KJC3_009418-T1|Name=KJC3_009418-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch7:339075..340655- (Aspergillus niger KJC3)
TCGCAAAAAAGATACCCGGTTCGGTATAGTGTGACAGGGCCTCAAGTTTA
AATATGCGTGGGGTCTGGGGTTTCAGCTTTCCTGATAACCAAATCTACAG
GGTTCAGATCTGCCTAAACTATTAATAGTGATTAGACTCTGTCCTGTTCT
TGTCTATCTCGTACGTCTGATTAAGCTCATCCCATCGCAAAAGTATAACC
TTTATCAGACAAGTTTATGGCTTCTGAAACAATGCATCGCCCGCAGGAAC
GAGACCACAGGGGCTGTTCGCAGGTGTGTCTGAGCACGGAAGATGTATAA
AATCGCCTCCTCATAGCTATCAAATTGCCTCAGAAATATCACATCGAAGA
ATCCAACCTCATCAACCGACCAACTCGCCCTTAATCCGTCTCGATCACCA
CCCATCAAACCACCAACATGGTCAAAGTCGACCGCCCCCCAGCCAACAAC
TTTGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTCGCCAAAGG
CTACAACTTCATCCTATGGATGATATCCGCCGGGGCACTCCTCGGCTTCT
CTCTCGCGCGTCTGATGTACCTCGACTTCGACAACATCTTCTGTCCCGCA
GACCAGAACAAAGCCAATGCTCTTCCCGGCGAATGCTTCTACTACCAGGA
TACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCGG
CCTGTCTTCTCGCCTTCCTTCAATTCGTCCCCGCCATCCGCCACAAAGTG
ATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGCTCCTTCAC
CGGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGCGGCGGCC
TGAGCATACAAATCGCCCTCGGCTTAGCGCTCATCATCTTCCTCAGCTGT
ATCTGCATCGCTTACCATAACATCAAACGACTCCAGATCGAGCAGCACCG
GGCATGGATGATCCGCGCTTGGGTCGTGGTTAGTACCCCCTTCCCCACCC
CATCCCCTATTCTTTTTTTCCGCCCTAAATCCTGAACCCTATAGGGCGGC
TTCATCATAACCATGCGCATCATCGGCATCACAACAGACAAAGTCCTCGT
GGCCCTCAGCCCAGAACAATACTTCGTATCCTACTCCTGCTCCGAGATCT
CCTTCATGCTGAACGGAAACCAATCCGTCCTGCAATCCCTCCACCCATCC
TGCACCGGCGCTAATCCGAACCACCATGTTCTCGTCAACGCATTCAGCGC
CAACGGCACCGGGAACGTTGATCAGGCTGCCGCCGGCCTCGATATCAGTT
TCAGTGCTGCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAG
CTGTATCTTCATCTTACTCCGGCGGAGTCGGCGAGGCTGAGGCGTGTGTC
GTATCAGAGGCAGTTGGAGGCGGGGATGAGATGGCCTGGGAATGCGGGGT
TGACGGCGGAGAGGGTTGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGG
GTGGAGAGGAGTGAGAGTGGGAGTGAGGTGGTATTGGCTGGTAGGAGGGG
GGATGGGAGGGATTAGATTGGTTTTGAGGGG back to topCoding sequence (CDS) from alignment at ch7:339075..340655- >KJC3_009418-T1 ID=KJC3_009418-T1|Name=KJC3_009418-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch7:339075..340655- (Aspergillus niger KJC3)
GGCGGCTTCATCATAACCATGCGCATCATCGGCATCACAACAGACAAAGT
CCTCGTGGCCCTCAGCCCAGAACAATACTTCGTATCCTACTCCTGCTCCG
AGATCTCCTTCATGCTGAACGGAAACCAATCCGTCCTGCAATCCCTCCAC
CCATCCTGCACCGGCGCTAATCCGAACCACCATGTTCTCGTCAACGCATT
CAGCGCCAACGGCACCGGGAACGTTGATCAGGCTGCCGCCGGCCTCGATA
TCAGTTTCAGTGCTGCGGCGTGGCTGGCTGTCGCTATTCATGTCTTTGCG
GCGGAGCTGTATCTTCATCTTACTCCGGCGGAGTCGGCGAGGCTGAGGCG
TGTGTCGTATCAGAGGCAGTTGGAGGCGGGGATGAGATGGCCTGGGAATG
CGGGGTTGACGGCGGAGAGGGTTGGTGATGCGGAGCCGTTTTTGATGGTG
AAGGGGGTGGAGAGGAGTGAGAGTGGGAGTGAGGTGGTATTGGCTGGTAG
GAGGGGGGATGGGAGGGATTAGATGGTCAAAGTCGACCGCCCCCCAGCCA
ACAACTTTGTAGCCACAGCCCGAAAGATCTACAACCCGATCGGCTTCGCC
AAAGGCTACAACTTCATCCTATGGATGATATCCGCCGGGGCACTCCTCGG
CTTCTCTCTCGCGCGTCTGATGTACCTCGACTTCGACAACATCTTCTGTC
CCGCAGACCAGAACAAAGCCAATGCTCTTCCCGGCGAATGCTTCTACTAC
CAGGATACTCGCGGCCGCGTCGGCATCCTCCTCCACCTGGGCGCCATCCT
CCCGGCCTGTCTTCTCGCCTTCCTTCAATTCGTCCCCGCCATCCGCCACA
AAGTGATCCTCTTCCACCGCATCAACGGCTACCTGGTCATCATCGGCTCC
TTCACCGGCATGGCCGGCGTCCTAATGATAGCCGAGCACAGCTTCGGCGG
CGGCCTGAGCATACAAATCGCCCTCGGCTTAGCGCTCATCATCTTCCTCA
GCTGTATCTGCATCGCTTACCATAACATCAAACGACTCCAGATCGAGCAG
CACCGGGCATGGATGATCCGCGCTTGGGTCGTGGGCGGCTTCATCATAAC
CATGCGCATCATCGGCATCACAACAGACAAAGTCCTCGTGGCCCTCAGCC
CAGAACAATACTTCGTATCCTACTCCTGCTCCGAGATCTCCTTCATGCTG
AACGGAAACCAATCCGTCCTGCAATCCCTCCACCCATCCTGCACCGGCGC
TAATCCGAACCACCATGTTCTCGTCAACGCATTCAGCGCCAACGGCACCG
GGAACGTTGATCAGGCTGCCGCCGGCCTCGATATCAGTTTCAGTGCTGCG
GCGTGGCTGGCTGTCGCTATTCATGTCTTTGCGGCGGAGCTGTATCTTCA
TCTTACTCCGGCGGAGTCGGCGAGGCTGAGGCGTGTGTCGTATCAGAGGC
AGTTGGAGGCGGGGATGAGATGGCCTGGGAATGCGGGGTTGACGGCGGAG
AGGGTTGGTGATGCGGAGCCGTTTTTGATGGTGAAGGGGGTGGAGAGGAG
TGAGAGTGGGAGTGAGGTGGTATTGGCTGGTAGGAGGGGGGATGGGAGGG
ATTAGATGGTCAAAGTCGACCGCCCCCCAGCCAACAACTTTGTAGCCACA
GCCCGAAAGATCTACAACCCGATCGGCTTCGCCAAAGGCTACAACTTCAT
CCTATGGATGATATCCGCCGGGGCACTCCTCGGCTTCTCTCTCGCGCGTC
TGATGTACCTCGACTTCGACAACATCTTCTGTCCCGCAGACCAGAACAAA
GCCAATGCTCTTCCCGGCGAATGCTTCTACTACCAGGATACTCGCGGCCG
CGTCGGCATCCTCCTCCACCTGGGCGCCATCCTCCCGGCCTGTCTTCTCG
CCTTCCTTCAATTCGTCCCCGCCATCCGCCACAAAGTGATCCTCTTCCAC
CGCATCAACGGCTACCTGGTCATCATCGGCTCCTTCACCGGCATGGCCGG
CGTCCTAATGATAGCCGAGCACAGCTTCGGCGGCGGCCTGAGCATACAAA
TCGCCCTCGGCTTAGCGCTCATCATCTTCCTCAGCTGTATCTGCATCGCT
TACCATAACATCAAACGACTCCAGATCGAGCAGCACCGGGCATGGATGAT
CCGCGCTTGGGTCGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009418-T1.utr3p1 | KJC3_009418-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009418-T1.utr5p1 | KJC3_009418-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018750 |
| DBxref | PFAM:PF10067 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:339075..340655 - |
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