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KJC3_009419-T1, KJC3_009419-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009419-T1
Unique NameKJC3_009419-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:340634..342805+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009419-T1 ID=KJC3_009419-T1|Name=KJC3_009419-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2172bp|location=Sequence derived from alignment at ch7:340634..342805+ (Aspergillus niger KJC3)
GAACCGGGTATCTTTTTTGCGACAGCACATGGCCAAGACCCTATCGCGTC
CGACAGCATCTCAGCCGCAGTTGCAGCCACCCCACAACTAGCCTGATTCT
GCGTTGTGATTAGGCTCTGAGTGGGGGCCGAATGACAGCCTTGTCTGGTC
GGACCTCCTATTTAATCCATTTATTGATGAAGGATTGCAGATACCCATCC
TGTCGCAACACCATCGCTGCTTTTGGCACCCCCCCACTCTCAATATGGTC
AATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACGTGTCAA
ATGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCAACCTTC
GTTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGGGATCAA
ACCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCAGAATCA
ACAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTGCTGTCC
CATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAGTCTGCC
CGTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCAGCAGAA
CTCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCCTGTCGC
GTTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTATACCCAG
GCCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATTGACAAA
CCCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAAATTTCG
CTGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAGGGAGCC
GTCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTCGCTGAT
CGCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAGCGATAC
GTCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGGTGCATA
GAGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGCAATAGG
CGTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAGCCCACG
TAGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCCGAGGCA
AAGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCCGCAACA
TTTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTTCGATCC
CAACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATTGGATCA
CTGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGATAATCCT
CAGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAATCAAATG
CTGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAGCTGGTC
GATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGGCGGATG
GTTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTAGCCATC
GCTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCAGAAGAC
GAGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCATGAGTGT
GTTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGGGGATGG
TGTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAGTTCCTG
CGTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGATGGTAA
AGCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAGATGCCA
AAATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATATGACTG
TTCTTCTTTGGGACTTGGTCTGACAATTCATATCTCCAATGTTAGTTGGG
GGATGCAAGATTGGGAGAGGACGGAAACGAGGTTTATGATGATGCTAATA
GTACATTGATGATAGCTACGTTAATCTTCTGCAGTTGGAGGTAAATGTAC
CACATCCCCTGAAAGTAAGCAGCAACCTGAGGCCGAAACCATCAGCCTCG
CCGCCAAGCCCGAATCTGCCTGCAGCACAGCCTCGTCTCACTCTCTTCCT
TCACGACAACTGATCATTAGGC
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Coding sequence (CDS) from alignment at ch7:340634..342805+

>KJC3_009419-T1 ID=KJC3_009419-T1|Name=KJC3_009419-T1|organism=Aspergillus niger KJC3|type=CDS|length=1653bp|location=Sequence derived from alignment at ch7:340634..342805+ (Aspergillus niger KJC3)
ATGGTCAATCGCGGACCCTCTGGAGGATGTGTTACATGCAAAACACGACG
TGTCAAATGTGACGAGGCGAAGCCCGAATGCCACGCGTGTCAACGCCTCA
ACCTTCGTTGCGGGGGCTACAAGCCAAAGCCTGTCAAGATTAGGTTCAGG
GATCAAACCGCCAAGGTTTGCAACGACCTTGTTTCGAAGCAAGCCGCTCA
GAATCAACAATGGGTGCCTTGCTTGCGATCGCTAGCCGAACCCGACCCTG
CTGTCCCATTCTTCATTCGACATTACGGCGTCATGGGTCGCAATGCGAAG
TCTGCCCGTGGGTTTTTCGAGATATTAGCTCCAGTATACGCTACTCAGCA
GCAGAACTCGCCTCTCTCGCTCGCGGTGACTGCCGTGGCTTCGGAAATCC
TGTCGCGTTGGCGGCACGAGAGTAGCTCCCGAGCATCTTGGGAGACCTAT
ACCCAGGCCATCAAGCGTCTTCGGGAGACTCTCCAGGATCGCAATGAATT
GACAAACCCGGCAACAATGTTAGCCGTGTTGGCGCTGCAATTTTATGAAA
ATTTCGCTGTTATATACGGCAGTCACCAAGCCACGGGAGTACACCACGAG
GGAGCCGTCTCCTTGCTCCCACTCACAGATCAGGATCATGCCAGTGGGTC
GCTGATCGCACACATTCGGCGATGTATCCTTCACAATGAGATTTTATCAG
CGATACGTCATAAACGGCTTCTGCATAGCACGGCCCACTCGCGTCTTGGG
TGCATAGAGCCGACAATTGCGCCAGGTAATTTAGGCCCCGCACTCGATGC
AATAGGCGTATCCGTGGCCGAGTTGAATGCAAGTTATTGGCAGCAAGCAG
CCCACGTAGGTTCCATGTCTTCGACAAAAATCTGCAGAGACTGGAGAGCC
GAGGCAAAGTGTATTGACGAACGACTCCTTGCTTGGGCACAAAACGTCCC
GCAACATTTGCAGCCGGTGAGACTCCCGGATGGAATCGCTCTCGACCCTT
CGATCCCAACTTACAATTCTATGTGCGACGTCTACATTTCGTGCCAGATT
GGATCACTGTGGAACGAATGGCGCGCTCAACGCCTCTTGCTCGTCAAGAT
AATCCTCAGCTCGCTTAGTACCATTCCCACCGCTGGCCATCTTGCGCAAT
CAAATGCTGAAACCGAAGAGTTCGCCGAGTATAAGCACCTTCTTCAAGAG
CTGGTCGATTCGGTCTGTTACAGCGTGCCCTATTATCTTGGGAACCAAGG
CGGATGGTTAAGTATTCCCGACTTAACCGATCCAGCAATTGTGTTTCCTA
GCCATCGCTTACTAGACAATGTCAACCAGCAAAAGTCTGCGCAGAAGTCA
GAAGACGAGCACAGTAGTCATATTATCGCCCAAGGGCCGTGGCACGTCAT
GAGTGTGTTGAGTCGCGTGGTGGCATTCTTCATCGAGGACCATGGTCAGG
GGATGGTGTCTTTTCTCCGACCTGGACAGCTCGAGTGGATCCGGGAGCAG
TTCCTGCGTGTCACGCAGCTACTCCGTATTCCGTTGGAGGAGGCCAGTGA
TGGTAAAGCGAGATTCTATCCGTTGGACCGGTCTTTACAAGCAGATCTAG
ATGCCAAAATTGACAATCTCGCAAAGCGGATCAGGAAGGGCGCGTTTATA
TGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009419KJC3_009419Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009419-T1.utr5p1KJC3_009419-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009419-T1.exon1KJC3_009419-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009419-T1.cdsKJC3_009419-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009419-T1.utr3p1KJC3_009419-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009419-T1KJC3_009419-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:340634..342805 +
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