You are here

KJC3_009429-T1, KJC3_009429-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009429-T1
Unique NameKJC3_009429-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:374147..376256+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009429-T1 ID=KJC3_009429-T1|Name=KJC3_009429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2110bp|location=Sequence derived from alignment at ch7:374147..376256+ (Aspergillus niger KJC3)
CAGCCACGTCGCATAGTTACCACCCTTTCCACAATCAAAGCTTTATACCC ATCCACAACTACATATCACCATTCAAAATGCCTTCGTTTCTACCACTGTG GGACAGCAAGACTGAAGGAACGCCTTACAACCCTGGTACCAACTCACCTA CTGCCAATGCCCCAACCGAAGGCCAATGCACTACCGAAGAGAACGGAAGC CCCGAGAACCAACCACCTCCTGGCCATGATTTCGGCAGTGATGGGTCTCA ACCTTTGGTCGACATCGAAGGGGAAGCACCCCCTCGGGCCACTGGTACAG ACGATATTTCAGGGCCACTGCCTTCGATCACCGATGATGGTGCTGCAGCT GAACCTCGTGATGCAGGACAATGGCCTTTGACGACTTCCTTGATTGATGC ACTTCCAGAAGTCCAGAGCGAGTCTCCCGCAAAGGAGCACACTTCTGATT TGGGAAGAACAAGGAGCCAAGTACCTACATCTGTTCTATCGGTTAGTTCT GAACCCTCACGCCCCTCTCTGATCCATACTGCTCCACGGATACCGTATGC GGGACCAGGTCGGCCCGAGGGCCCTGGCCTGTTTGGATCCTCAATGAGAG AAGATAGTTTCTACAGTCAACAGTTTCTGACAAACAATGTTCAGGCGGCT CAACAGAACCAAATCCGGCATCGCCGCGGTGCAGCGGTCCATAACGTCGA TGCTGGCAACCTATTTGGAAGACCACGTCCTCAATTGGAGCGGACTGATT CTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCTCTCTGATTCTTTAAGC GAGAATGGTGCGACGACTCAAACCCGTGTAGCCGAGGGCGGAGATGCATC TAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAGGTCCTGGCTTCAGGTG CGTCCAGTATATACACTGCGACACCCTTGCTGGAGCTCGATGACACCCAT GTCCGTGAACATGAAGCTGGCAATACATCCTCATCTCAGGCAGGACAGTT CTGCTCAACTAAGCCCCGGACTACTGGAGCTACGAGGGCTGAAGATCAAT CAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTCCACCTGGCCAGCATTT GAATCTACTCCGGCCTATTCGAATGACTTGGGCTCTCTTTCCCTACCGGC TGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCGTATCCGTCCGCAAATA ACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGAGGAAGAAACTGCCACC AAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATATGGAGGCCTCTCCGTT GACCCCTTCTCATAATCAGGCCACCAGCAATCCTTCGGAATCTTCTCCAA ATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAATCCATACAGTTTCACG GTAACGTGGTACGCTCCAGAATCGGAGTTGGACTCCGGCAGTCAGTATTT CGATACTCACAGTACCCTTGCTCGATCCTTGCCACAAAGCGATCCTGGAA CGCACGCACCTTTGCTGGGCACTGCAGCTCTTAGTCAGTCGAGCCCCCCA AGACCAGGGAGCCCTGACTGTGAGGAGACGGCCGAAGGTGCCTCTGAAAG CCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACGGTAGCGGTTCGAGACG ACGACGAATTGAGTATCGACGCGAGCGATCCAGCTGAGTCTCATCGCGAC AAGGTGACACTCACAAACAAAGCGTATGTGGAAGACGATGCTCCTAGCGT CATGTCCGAGAATCTCCAAAGAAGGAGCGATTGACTCGATACTAGAGATG AGTCTGATGTCTGGTCCGTGGGCGAAGACGAGGACGGGATGATCTTCCAC CCCCGAGAACCGATTGATCGTGTCGAGCTTCTTCAACGCTATGAAAGTGT TTGTCAGACGCACAGGGCCGCATTGCGAAAAGTCTTACTATATGTGGCAG TTTCTGTGTACTCTGTGATTTTCCTGATCGTTTATTATTGGATTCTATTG ACTTCTTAGGCTATTGTCAAATGTGGTACGTTGCATTGGCTATGTCTCTA GATATGAAAACTTGAAACAAAATTGCTACTAGTTCATTTCTGCCAACAGG CTTTCCCTGC
back to top

Coding sequence (CDS) from alignment at ch7:374147..376256+

>KJC3_009429-T1 ID=KJC3_009429-T1|Name=KJC3_009429-T1|organism=Aspergillus niger KJC3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch7:374147..376256+ (Aspergillus niger KJC3)
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009429KJC3_009429Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009429-T1KJC3_009429-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009429-T1.utr5p1KJC3_009429-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009429-T1.exon1KJC3_009429-T1.exon1Aspergillus niger KJC3exon
KJC3_009429-T1.exon2KJC3_009429-T1.exon2Aspergillus niger KJC3exon
KJC3_009429-T1.exon3KJC3_009429-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009429-T1.cdsKJC3_009429-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009429-T1.utr3p1KJC3_009429-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:374147..376256 +