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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:374147..376256+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009429-T1 ID=KJC3_009429-T1|Name=KJC3_009429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2110bp|location=Sequence derived from alignment at ch7:374147..376256+ (Aspergillus niger KJC3)
CAGCCACGTCGCATAGTTACCACCCTTTCCACAATCAAAGCTTTATACCC
ATCCACAACTACATATCACCATTCAAAATGCCTTCGTTTCTACCACTGTG
GGACAGCAAGACTGAAGGAACGCCTTACAACCCTGGTACCAACTCACCTA
CTGCCAATGCCCCAACCGAAGGCCAATGCACTACCGAAGAGAACGGAAGC
CCCGAGAACCAACCACCTCCTGGCCATGATTTCGGCAGTGATGGGTCTCA
ACCTTTGGTCGACATCGAAGGGGAAGCACCCCCTCGGGCCACTGGTACAG
ACGATATTTCAGGGCCACTGCCTTCGATCACCGATGATGGTGCTGCAGCT
GAACCTCGTGATGCAGGACAATGGCCTTTGACGACTTCCTTGATTGATGC
ACTTCCAGAAGTCCAGAGCGAGTCTCCCGCAAAGGAGCACACTTCTGATT
TGGGAAGAACAAGGAGCCAAGTACCTACATCTGTTCTATCGGTTAGTTCT
GAACCCTCACGCCCCTCTCTGATCCATACTGCTCCACGGATACCGTATGC
GGGACCAGGTCGGCCCGAGGGCCCTGGCCTGTTTGGATCCTCAATGAGAG
AAGATAGTTTCTACAGTCAACAGTTTCTGACAAACAATGTTCAGGCGGCT
CAACAGAACCAAATCCGGCATCGCCGCGGTGCAGCGGTCCATAACGTCGA
TGCTGGCAACCTATTTGGAAGACCACGTCCTCAATTGGAGCGGACTGATT
CTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCTCTCTGATTCTTTAAGC
GAGAATGGTGCGACGACTCAAACCCGTGTAGCCGAGGGCGGAGATGCATC
TAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAGGTCCTGGCTTCAGGTG
CGTCCAGTATATACACTGCGACACCCTTGCTGGAGCTCGATGACACCCAT
GTCCGTGAACATGAAGCTGGCAATACATCCTCATCTCAGGCAGGACAGTT
CTGCTCAACTAAGCCCCGGACTACTGGAGCTACGAGGGCTGAAGATCAAT
CAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTCCACCTGGCCAGCATTT
GAATCTACTCCGGCCTATTCGAATGACTTGGGCTCTCTTTCCCTACCGGC
TGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCGTATCCGTCCGCAAATA
ACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGAGGAAGAAACTGCCACC
AAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATATGGAGGCCTCTCCGTT
GACCCCTTCTCATAATCAGGCCACCAGCAATCCTTCGGAATCTTCTCCAA
ATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAATCCATACAGTTTCACG
GTAACGTGGTACGCTCCAGAATCGGAGTTGGACTCCGGCAGTCAGTATTT
CGATACTCACAGTACCCTTGCTCGATCCTTGCCACAAAGCGATCCTGGAA
CGCACGCACCTTTGCTGGGCACTGCAGCTCTTAGTCAGTCGAGCCCCCCA
AGACCAGGGAGCCCTGACTGTGAGGAGACGGCCGAAGGTGCCTCTGAAAG
CCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACGGTAGCGGTTCGAGACG
ACGACGAATTGAGTATCGACGCGAGCGATCCAGCTGAGTCTCATCGCGAC
AAGGTGACACTCACAAACAAAGCGTATGTGGAAGACGATGCTCCTAGCGT
CATGTCCGAGAATCTCCAAAGAAGGAGCGATTGACTCGATACTAGAGATG
AGTCTGATGTCTGGTCCGTGGGCGAAGACGAGGACGGGATGATCTTCCAC
CCCCGAGAACCGATTGATCGTGTCGAGCTTCTTCAACGCTATGAAAGTGT
TTGTCAGACGCACAGGGCCGCATTGCGAAAAGTCTTACTATATGTGGCAG
TTTCTGTGTACTCTGTGATTTTCCTGATCGTTTATTATTGGATTCTATTG
ACTTCTTAGGCTATTGTCAAATGTGGTACGTTGCATTGGCTATGTCTCTA
GATATGAAAACTTGAAACAAAATTGCTACTAGTTCATTTCTGCCAACAGG
CTTTCCCTGC back to topCoding sequence (CDS) from alignment at ch7:374147..376256+ >KJC3_009429-T1 ID=KJC3_009429-T1|Name=KJC3_009429-T1|organism=Aspergillus niger KJC3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch7:374147..376256+ (Aspergillus niger KJC3)
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA
ATGCCTTCGTTTCTACCACTGTGGGACAGCAAGACTGAAGGAACGCCTTA
CAACCCTGAGAACGGAAGCCCCGAGAACCAACCACCTCCTGGCCATGATT
TCGGCAGTGATGGGTCTCAACCTTTGGTCGACATCGAAGGGGAAGCACCC
CCTCGGGCCACTGGTACAGACGATATTTCAGGGCCACTGCCTTCGATCAC
CGATGATGGTGCTGCAGCTGAACCTCGTGATGCAGGACAATGGCCTTTGA
CGACTTCCTTGATTGATGCACTTCCAGAAGTCCAGAGCGAGTCTCCCGCA
AAGGAGCACACTTCTGATTTGGGAAGAACAAGGAGCCAAGTACCTACATC
TGTTCTATCGGCGGCTCAACAGAACCAAATCCGGCATCGCCGCGGTGCAG
CGGTCCATAACGTCGATGCTGGCAACCTATTTGGAAGACCACGTCCTCAA
TTGGAGCGGACTGATTCTAGCGCGCTTCTCAGTTCGGAGTCATCGACCCT
CTCTGATTCTTTAAGCGAGAATGGTGCGACGACTCAAACCCGTGTAGCCG
AGGGCGGAGATGCATCTAGCCTCCAGGGGCCACAGTATGAGTCGTCCGAG
GTCCTGGCTTCAGGTGCGTCCAGTATATACACTGCGACACCCTTGCTGGA
GCTCGATGACACCCATGTCCGTGAACATGAAGCTGGCAATACATCCTCAT
CTCAGGCAGGACAGTTCTGCTCAACTAAGCCCCGGACTACTGGAGCTACG
AGGGCTGAAGATCAATCAGCATTGCTAGATGCTGTGTTCAAGGCCAAGTC
CACCTGGCCAGCATTTGAATCTACTCCGGCCTATTCGAATGACTTGGGCT
CTCTTTCCCTACCGGCTGGACTAAGTCAAAGTGAACGGGTGCCAGGTGCG
TATCCGTCCGCAAATAACCAAAACTCTGAAGAGGAGAGAGGTTCTCTTGA
GGAAGAAACTGCCACCAAAGCCCCGGAGAGCGCAGCTAAGCAACAAGATA
TGGAGGCCTCTCCGTTGACCCCTTCTCATAATCAGGCCACCAGCAATCCT
TCGGAATCTTCTCCAAATGCCTGGTATAGTGAAACTGAAGAGGGCTCTAA
TCCATACAGTTTCACGGTAACGTGGTACGCTCCAGAATCGGAGTTGGACT
CCGGCAGTCAGTATTTCGATACTCACAGTACCCTTGCTCGATCCTTGCCA
CAAAGCGATCCTGGAACGCACGCACCTTTGCTGGGCACTGCAGCTCTTAG
TCAGTCGAGCCCCCCAAGACCAGGGAGCCCTGACTGTGAGGAGACGGCCG
AAGGTGCCTCTGAAAGCCTTTCAAGCAAGCTGGACAAAGGCAAGAGCACG
GTAGCGGTTCGAGACGACGACGAATTGAGTATCGACGCGAGCGATCCAGC
TGAGTCTCATCGCGACAAGGTGACACTCACAAACAAAGCGTATGTGGAAG
ACGATGCTCCTAGCGTCATGTCCGAGAATCTCCAAAGAAGGAGCGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009429-T1.utr5p1 | KJC3_009429-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009429-T1.utr3p1 | KJC3_009429-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:374147..376256 + |
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