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KJC3_009443-T1, KJC3_009443-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009443-T1
Unique NameKJC3_009443-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:409575..410264+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009443-T1 ID=KJC3_009443-T1|Name=KJC3_009443-T1|organism=Aspergillus niger KJC3|type=mRNA|length=690bp|location=Sequence derived from alignment at ch7:409575..410264+ (Aspergillus niger KJC3)
CTCATCGAAACCTAACCATACAATCCTACGAACGTACAACTTACAACATG
GCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGA
GAAATACGGGTTCAGCGATGCCTGCATCATCGGCAATCGGCTGGTCGTCA
CTGGGCAGAGTAAGCAGTGTACCGGAACCACGTCTGAGGACCCAGGGCTA
ATCAGATTGCAAAGCGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCA
AAATTGAGGAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTGATC
ATCCACACTCTCGTTCAAGAAGGTCATGCCATTGAGGAGAATAGTACTGG
CTGGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAA
TGCGCGTGGAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGGTGT
CCTCGCCATCAGCCGTTGTTCACCATGGTAGGAATCGAAAGCCTGCCTTT
TCCCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAATATG
ATGCATGCTATGGCCCAATTGCGGTTTTAACCCCTTGTATTCCACGGAGG
GTGCGGAATGAAGAGGGCCTTTTTGTACTGAATTACTACATTATTGCTCT
TATGCCTGATATCAGTCTCCTAGAATACCTTGTAATCGTC
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Coding sequence (CDS) from alignment at ch7:409575..410264+

>KJC3_009443-T1 ID=KJC3_009443-T1|Name=KJC3_009443-T1|organism=Aspergillus niger KJC3|type=CDS|length=888bp|location=Sequence derived from alignment at ch7:409575..410264+ (Aspergillus niger KJC3)
ATGGCCTCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCG
CGAGAAATACGGGTTCAGCGATGCCTGCATCATCGGCAATCGGCTGGTCG
TCACTGGGCAGACGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAA
ATTGAGGAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTGATCAT
CCACACTCTCGTTCAAGAAGGTCATGCCATTGAGGAGAATAGTACTGGCT
GGGATTACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATG
CGCGTGGAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGGTGTCC
TCGCCATCAGCCGTTGTTCACCATGGTAGGAATCGAAAGCCTGCCTTTTC
CCGAGCACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAAATGGCC
TCTTTCAAGTATCACGCACTTCCTGGCTTTGGAGAAGAGTGTCGCGAGAA
ATACGGGTTCAGCGATGCCTGCATCATCGGCAATCGGCTGGTCGTCACTG
GGCAGACGGGCATGAATCCTTTGACCAGAGAAACTTCTCCCAAAATTGAG
GAGCAAATTGCGCAGGCCTTCAACAACATCAATGACCTGATCATCCACAC
TCTCGTTCAAGAAGGTCATGCCATTGAGGAGAATAGTACTGGCTGGGATT
ACGTGGTCAAGCTGCGCGCGTTCTTCGTGGGATTATCCGGAATGCGCGTG
GAAGCACGGGAGAATATGGTCCACTACATCAAGAAGTGGTGTCCTCGCCA
TCAGCCGTTGTTCACCATGGTAGGAATCGAAAGCCTGCCTTTTCCCGAGC
ACCTTGTGGAGTTTGAAGTTGGTGTATGGATTCCTTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009443KJC3_009443Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009443-T1.utr5p1KJC3_009443-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009443-T1.exon1KJC3_009443-T1.exon1Aspergillus niger KJC3exon
KJC3_009443-T1.exon2KJC3_009443-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009443-T1.cdsKJC3_009443-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009443-T1.utr3p1KJC3_009443-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009443-T1KJC3_009443-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035959
DBxrefInterPro:IPR006175
DBxrefPFAM:PF01042
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:409575..410264 +
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