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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:442327..445744+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009459-T1 ID=KJC3_009459-T1|Name=KJC3_009459-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3418bp|location=Sequence derived from alignment at ch7:442327..445744+ (Aspergillus niger KJC3)
GCCCGACCTGCACTCTGCTTACTTTTCTACTCTGAGGCTGATACATTGCG
AATACTTGCTTAATTCGCTTACTTCAAAACAGCGGCGGGTCCGAATCTAA
TTAATGTCGTCCACCTCTCCGACTGGGCCTCAGGGTCAGAATCGACCTAA
ACTCGCCTGTTCTCTCTGCGCTCGGCGTAAGGTGAAATGCGATAAGGGCG
AGCCGTGCTCTAACTGCCTCAAGGCGCATGCTCAGTGCTTATACGAGGCC
CCTGCTCCACCTCGACCACGGAAGAGGGCTGCTGATGAAGAGCTTCTCGC
ACGACTAGCTCGGTACGAGGAGCTCATGCGGAAGCACAATATCGATTTCT
CCTCATATGCCCACTGCTGGATCCCTTCGAACCAGAAGACTCAACCGAAG
GTGAGCCATCTGGCTGGCTTACGCACCGAAGTGGGCGGCGAAACTAGTGT
TCATTCTCAAGAAAGGCTCACTGAGAGCACGGATGCTGAAAGAGAACAGT
AAGGTTCCCGCGCGACTAAGAGACTTTCTGCAATATGTTACTAATGATTG
ACAGATGTTTGTGGTCAAATCTAAGGCCAGAGGTTGGTGTTTTCCGCTAC
TACCGTGATCATACGATACTAATGTCCCACTGCGAATAGCTCATGTACCC
CCCTATTCAGAGCCTCAGACACAAGGATGACCCCCTTCTCTATCCTACTC
CTTCCTTTGAAGAGGCTATCTCTGATACACAAAGTATCCATGACGTCCAT
CCCGAGCCAAAGCACATCTATCGGTTGTGGCAGATCTTTGTGGAAAGGGT
CCACCCAATGACAAAGATCGTTCATGTCCCTACCCTGCAGCAGCGTATCT
TAGATACTAGCTGCAATCCCTACTGCGCATCCAAGCAACTGACGGCTATA
ATTTTTGCCATCTATACCATTTCAACCACCTCTATCTCCGCGGGAGACTG
TGAAACTTATTTTGGCCTGGGAAAGGCCCTTCTTTTGAGACAATACCGAA
CCGCAACTCTGCGTGCTCTTATTGCAGCAGACTTCCTCACAACTAGTGAC
CTCGAAGTTTTACAAGCACTGGTATTGTTTCTCTTCTCTAACCCAGGATG
TGATTTAGCAACCACCCTGTCCGGCGCCGCGCTCCGACTAGCCGAGAAGA
TGGGTTTGCATCAAGACACATCTGACCCCAACATATCTTTCTTTGAAAAG
GAGATGCGCATTCGTCTATGGTGGCAGCTCTGCGGTCTCAGCGCTCGGTG
TCGCATTAGCTCTACCCCAGGAATGAAGAAGCCACCACCCACTTCCGAGA
TAGGCGACGTCCGCCTCCCACTCAACGTGAACGACGTGGATCTGCATCCG
GACATGACTGAGCCTCCTCTGGAACACAACGGTCCCACAGAGATGATGTG
TGTCCTGTTGAAAATGGAAGCCTCCAACTGGCGCCGACATTTTCCGACAG
CCACCAAGCTCTTTGAAAGTGTGATGCAGGGCTCGATCAGGTCCAAGGAG
GTAATCGAACTGGAGTGCAAGGCGGTTGACGAGCTCAACGACATATACTG
TCGGAAATACTTTCATAATTCTGATCCACACATCCCACTTCATAGCCTTA
CTCATGCTATTGCGAAACTCTCAATCGCGCGCTTCAGGTTCAAAATTCGT
CATCCTCAAGGGCGGCTCACCGCAGCTGACAACAATGCCTTTTTTACACG
TGAGGAAAGTGATATCCTATTCGAATCATGTCTGACCTGGGTGCAATCCA
TGATGGATATCAGGTTACGCAGCAAGTTCCCGTATTATTTATTCACGCAC
CTCACGACAGACTCTTACATGGATGTTTATATCTACCTCCTGAGTGAGCT
GCGGCGACGATGCTCAGGGGACCGCGTAGCACTTGCTTGGCAACTGGTCG
AAGAACTTTTCAATGAACATCCTGAGCTTATTGATGGTGACGACGATTTC
TATGCTGCATTTGGGGACTTGGTCTTGGATGCATGGGAACATCACAGTCA
CGAGCTGAAAAAAGGCCCGGGAGGTCTAGGATTCGTCACCAAGCCACGAT
TTATTGAACGACTCTATCAGGAAAAGTCTACAAGCGGTCGACCTCGTTAT
AGTAATCTGCCTTCTTTCTCGGATTCACGTGAACTTGGTGGGCTTGAACT
GCAAGATGAAAATGATAGCAATTGGCTGTATTGGGAGGAGTTTCTTCGGT
TATAGGCAGGAATGTGCGGTGCGGTAAGAAATATTGATCAATAAATTTGA
AACTAATGAATAGTCTAACGTCAACAATCTCATACATCGGAAGGTGTAGG
TTCATAGTTCTTTCAGTGCGTCTAATGTACATCTTGGTAACATACGGAAG
ATGACCCGAAGGAAAACTATGATAGAATGCATTTTCTATTCGACCCCCAC
TTCTAGCAGGCTACCAAGACCATTCTGAGGTAAACACAAAATAGTGGCCG
AACTAGCTTCGGTGAAATCAAAATAAATACTCAATCAACACACAACCAAA
CAGCCCCTTCAGTGAAAGGAGCTCTGCCAATAAAAGCAAACAGAAAACAC
AGATTTATCGCCAACAAAACATCGAGCTTGACCCTTCGTGGGACCCCCGA
GCCTCTCTATCCTCATACAAGACTTTCCAGTCTATGTAATGCTAACAATA
GGCAAAGACTGACGATGGACCGATTGCGGAGTAGTCAAGTTGCCAAACTC
TACCGCGAGATCTCTCTTGATGTCCGAAACTTGGACGGCACAATGTGACT
CGGCAACACGAATGGGGCATCCAACTCACTCTTCCCCAGGATGCTCGTAA
TCAAGAGCAGACTCTAAGCTGTCCAAACATCTATTATAAACGCGGGGGAA
TTACTCCACTATCTTTGCACGCTTGGCAGCATTCGTCGGCTGCTGTCCAC
ATTCCACCCATTTCCGCCTGCGCCTAGCTTCCTGTGCCGCAGAAATACTA
GGACGTTTGCCAAAACAATTATCATTTGCGACCTTCTCGCAATACTTAAC
GTGGCTTTCAATAAAGTTCCCGACCTGTCCAGGGCGAGGAGTGAGTATGT
TGATAGATTCATGTGGGCTATTTGAAACCAGAAGAACGCGACGAGCATGG
CTAGCTTTCCAGTTCACCTGCTTGCCAAGGTGTAGAAGGACATGGTAGAC
AATCCCCTTCTGCGTATACTCCTGACAACATCCATAGAACCTATCGGAAG
CGAGAGAATTTTGCTTTAACATTGCTCGAAGCCCTTCCACAAAATCAACT
TCATGCTCCAACGGACACTCCGTGTAGGTAAGAAAGATCCATCGGCGATG
TATCTTCTTGTTCCAAGGCGCCAATGTTTTAGGAGAGGGCCCGACCGTCA
CAACAGAGGACGGCTGAGAAACCTCAGCGGATAATTCCACATGGAAGCGA
TGGAAAGTCATTGTTATG back to topCoding sequence (CDS) from alignment at ch7:442327..445744+ >KJC3_009459-T1 ID=KJC3_009459-T1|Name=KJC3_009459-T1|organism=Aspergillus niger KJC3|type=CDS|length=5301bp|location=Sequence derived from alignment at ch7:442327..445744+ (Aspergillus niger KJC3)
ATGCGGAAGCACAATATCGATTTCTCCTCATATGCCCACTGCTGGATCCC
TTCGAACCAGAAGACTCAACCGAAGGTGAGCCATCTGGCTGGCTTACGCA
CCGAAGTGGGCGGCGAAACTAGTGTTCATTCTCAAGAAAGGCTCACTGAG
AGCACGGATGCTGAAAGAGAACAATGTTTGTGGTCAAATCTAAGGCCAGA
GCTCATGTACCCCCCTATTCAGAGCCTCAGACACAAGGATGACCCCCTTC
TCTATCCTACTCCTTCCTTTGAAGAGGCTATCTCTGATACACAAAGTATC
CATGACGTCCATCCCGAGCCAAAGCACATCTATCGGTTGTGGCAGATCTT
TGTGGAAAGGGTCCACCCAATGACAAAGATCGTTCATGTCCCTACCCTGC
AGCAGCGTATCTTAGATACTAGCTGCAATCCCTACTGCGCATCCAAGCAA
CTGACGGCTATAATTTTTGCCATCTATACCATTTCAACCACCTCTATCTC
CGCGGGAGACTGTGAAACTTATTTTGGCCTGGGAAAGGCCCTTCTTTTGA
GACAATACCGAACCGCAACTCTGCGTGCTCTTATTGCAGCAGACTTCCTC
ACAACTAGTGACCTCGAAGTTTTACAAGCACTGGTATTGTTTCTCTTCTC
TAACCCAGGATGTGATTTAGCAACCACCCTGTCCGGCGCCGCGCTCCGAC
TAGCCGAGAAGATGGGTTTGCATCAAGACACATCTGACCCCAACATATCT
TTCTTTGAAAAGGAGATGCGCATTCGTCTATGGTGGCAGCTCTGCGGTCT
CAGCGCTCGGTGTCGCATTAGCTCTACCCCAGGAATGAAGAAGCCACCAC
CCACTTCCGAGATAGGCGACGTCCGCCTCCCACTCAACGTGAACGACGTG
GATCTGCATCCGGACATGACTGAGCCTCCTCTGGAACACAACGGTCCCAC
AGAGATGATGTGTGTCCTGTTGAAAATGGAAGCCTCCAACTGGCGCCGAC
ATTTTCCGACAGCCACCAAGCTCTTTGAAAGTGTGATGCAGGGCTCGATC
AGGTCCAAGGAGGTAATCGAACTGGAGTGCAAGGCGGTTGACGAGCTCAA
CGACATATACTGTCGGAAATACTTTCATAATTCTGATCCACACATCCCAC
TTCATAGCCTTACTCATGCTATTGCGAAACTCTCAATCGCGCGCTTCAGG
TTCAAAATTCGTCATCCTCAAGGGCGGCTCACCGCAGCTGACAACAATGC
CTTTTTTACACGTGAGGAAAGTGATATCCTATTCGAATCATGTCTGACCT
GGGTGCAATCCATGATGGATATCAGGTTACGCAGCAAGTTCCCGTATTAT
TTATTCACGCACCTCACGACAGACTCTTACATGGATGTTTATATCTACCT
CCTGAGTGAGCTGCGGCGACGATGCTCAGGGGACCGCGTAGCACTTGCTT
GGCAACTGGTCGAAGAACTTTTCAATGAACATCCTGAGCTTATTGATGGT
GACGACGATTTCTATGCTGCATTTGGGGACTTGGTCTTGGATGCATGGGA
ACATCACAGTCACGAGCTGAAAAAAGGCCCGGGAGGTCTAGGATTCGTCA
CCAAGCCACGATTTATTGAACGACTCTATCAGGAAAAGTCTACAAGCGGT
CGACCTCGTTATAGTAATCTGCCTTCTTTCTCGGATTCACGTGAACTTGG
TGGGCTTGAACTGCAAGATGAAAATGATAGCAATTGGCTGTATTGGGAGG
AGTTTCTTCGGTTATAGATGCGGAAGCACAATATCGATTTCTCCTCATAT
GCCCACTGCTGGATCCCTTCGAACCAGAAGACTCAACCGAAGGTGAGCCA
TCTGGCTGGCTTACGCACCGAAGTGGGCGGCGAAACTAGTGTTCATTCTC
AAGAAAGGCTCACTGAGAGCACGGATGCTGAAAGAGAACAATGTTTGTGG
TCAAATCTAAGGCCAGAGCTCATGTACCCCCCTATTCAGAGCCTCAGACA
CAAGGATGACCCCCTTCTCTATCCTACTCCTTCCTTTGAAGAGGCTATCT
CTGATACACAAAGTATCCATGACGTCCATCCCGAGCCAAAGCACATCTAT
CGGTTGTGGCAGATCTTTGTGGAAAGGGTCCACCCAATGACAAAGATCGT
TCATGTCCCTACCCTGCAGCAGCGTATCTTAGATACTAGCTGCAATCCCT
ACTGCGCATCCAAGCAACTGACGGCTATAATTTTTGCCATCTATACCATT
TCAACCACCTCTATCTCCGCGGGAGACTGTGAAACTTATTTTGGCCTGGG
AAAGGCCCTTCTTTTGAGACAATACCGAACCGCAACTCTGCGTGCTCTTA
TTGCAGCAGACTTCCTCACAACTAGTGACCTCGAAGTTTTACAAGCACTG
GTATTGTTTCTCTTCTCTAACCCAGGATGTGATTTAGCAACCACCCTGTC
CGGCGCCGCGCTCCGACTAGCCGAGAAGATGGGTTTGCATCAAGACACAT
CTGACCCCAACATATCTTTCTTTGAAAAGGAGATGCGCATTCGTCTATGG
TGGCAGCTCTGCGGTCTCAGCGCTCGGTGTCGCATTAGCTCTACCCCAGG
AATGAAGAAGCCACCACCCACTTCCGAGATAGGCGACGTCCGCCTCCCAC
TCAACGTGAACGACGTGGATCTGCATCCGGACATGACTGAGCCTCCTCTG
GAACACAACGGTCCCACAGAGATGATGTGTGTCCTGTTGAAAATGGAAGC
CTCCAACTGGCGCCGACATTTTCCGACAGCCACCAAGCTCTTTGAAAGTG
TGATGCAGGGCTCGATCAGGTCCAAGGAGGTAATCGAACTGGAGTGCAAG
GCGGTTGACGAGCTCAACGACATATACTGTCGGAAATACTTTCATAATTC
TGATCCACACATCCCACTTCATAGCCTTACTCATGCTATTGCGAAACTCT
CAATCGCGCGCTTCAGGTTCAAAATTCGTCATCCTCAAGGGCGGCTCACC
GCAGCTGACAACAATGCCTTTTTTACACGTGAGGAAAGTGATATCCTATT
CGAATCATGTCTGACCTGGGTGCAATCCATGATGGATATCAGGTTACGCA
GCAAGTTCCCGTATTATTTATTCACGCACCTCACGACAGACTCTTACATG
GATGTTTATATCTACCTCCTGAGTGAGCTGCGGCGACGATGCTCAGGGGA
CCGCGTAGCACTTGCTTGGCAACTGGTCGAAGAACTTTTCAATGAACATC
CTGAGCTTATTGATGGTGACGACGATTTCTATGCTGCATTTGGGGACTTG
GTCTTGGATGCATGGGAACATCACAGTCACGAGCTGAAAAAAGGCCCGGG
AGGTCTAGGATTCGTCACCAAGCCACGATTTATTGAACGACTCTATCAGG
AAAAGTCTACAAGCGGTCGACCTCGTTATAGTAATCTGCCTTCTTTCTCG
GATTCACGTGAACTTGGTGGGCTTGAACTGCAAGATGAAAATGATAGCAA
TTGGCTGTATTGGGAGGAGTTTCTTCGGTTATAGATGCGGAAGCACAATA
TCGATTTCTCCTCATATGCCCACTGCTGGATCCCTTCGAACCAGAAGACT
CAACCGAAGGTGAGCCATCTGGCTGGCTTACGCACCGAAGTGGGCGGCGA
AACTAGTGTTCATTCTCAAGAAAGGCTCACTGAGAGCACGGATGCTGAAA
GAGAACAATGTTTGTGGTCAAATCTAAGGCCAGAGCTCATGTACCCCCCT
ATTCAGAGCCTCAGACACAAGGATGACCCCCTTCTCTATCCTACTCCTTC
CTTTGAAGAGGCTATCTCTGATACACAAAGTATCCATGACGTCCATCCCG
AGCCAAAGCACATCTATCGGTTGTGGCAGATCTTTGTGGAAAGGGTCCAC
CCAATGACAAAGATCGTTCATGTCCCTACCCTGCAGCAGCGTATCTTAGA
TACTAGCTGCAATCCCTACTGCGCATCCAAGCAACTGACGGCTATAATTT
TTGCCATCTATACCATTTCAACCACCTCTATCTCCGCGGGAGACTGTGAA
ACTTATTTTGGCCTGGGAAAGGCCCTTCTTTTGAGACAATACCGAACCGC
AACTCTGCGTGCTCTTATTGCAGCAGACTTCCTCACAACTAGTGACCTCG
AAGTTTTACAAGCACTGGTATTGTTTCTCTTCTCTAACCCAGGATGTGAT
TTAGCAACCACCCTGTCCGGCGCCGCGCTCCGACTAGCCGAGAAGATGGG
TTTGCATCAAGACACATCTGACCCCAACATATCTTTCTTTGAAAAGGAGA
TGCGCATTCGTCTATGGTGGCAGCTCTGCGGTCTCAGCGCTCGGTGTCGC
ATTAGCTCTACCCCAGGAATGAAGAAGCCACCACCCACTTCCGAGATAGG
CGACGTCCGCCTCCCACTCAACGTGAACGACGTGGATCTGCATCCGGACA
TGACTGAGCCTCCTCTGGAACACAACGGTCCCACAGAGATGATGTGTGTC
CTGTTGAAAATGGAAGCCTCCAACTGGCGCCGACATTTTCCGACAGCCAC
CAAGCTCTTTGAAAGTGTGATGCAGGGCTCGATCAGGTCCAAGGAGGTAA
TCGAACTGGAGTGCAAGGCGGTTGACGAGCTCAACGACATATACTGTCGG
AAATACTTTCATAATTCTGATCCACACATCCCACTTCATAGCCTTACTCA
TGCTATTGCGAAACTCTCAATCGCGCGCTTCAGGTTCAAAATTCGTCATC
CTCAAGGGCGGCTCACCGCAGCTGACAACAATGCCTTTTTTACACGTGAG
GAAAGTGATATCCTATTCGAATCATGTCTGACCTGGGTGCAATCCATGAT
GGATATCAGGTTACGCAGCAAGTTCCCGTATTATTTATTCACGCACCTCA
CGACAGACTCTTACATGGATGTTTATATCTACCTCCTGAGTGAGCTGCGG
CGACGATGCTCAGGGGACCGCGTAGCACTTGCTTGGCAACTGGTCGAAGA
ACTTTTCAATGAACATCCTGAGCTTATTGATGGTGACGACGATTTCTATG
CTGCATTTGGGGACTTGGTCTTGGATGCATGGGAACATCACAGTCACGAG
CTGAAAAAAGGCCCGGGAGGTCTAGGATTCGTCACCAAGCCACGATTTAT
TGAACGACTCTATCAGGAAAAGTCTACAAGCGGTCGACCTCGTTATAGTA
ATCTGCCTTCTTTCTCGGATTCACGTGAACTTGGTGGGCTTGAACTGCAA
GATGAAAATGATAGCAATTGGCTGTATTGGGAGGAGTTTCTTCGGTTATA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009459-T1.utr3p1 | KJC3_009459-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:442327..445744 + |
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