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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:460716..461451+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009466-T1 ID=KJC3_009466-T1|Name=KJC3_009466-T1|organism=Aspergillus niger KJC3|type=mRNA|length=736bp|location=Sequence derived from alignment at ch7:460716..461451+ (Aspergillus niger KJC3)
CAGACCACCACAAACATGGCTACTAACGGCTCTATCAATTTTGGCAAAAA
CTATGCCGTTCTAAACCTAGACTGGATTACGGTGCTTATCGACGCCGTCG
AGGACACCCCTGAAGGCCAAGCATTGATCGCAAACTACACCAAGTGGAAC
GATGCCGTTCATGCGAGTTCATCACGTCCTCTAACCGTTTTCTCTACACT
TTCCTTTTATCCCGGCCAGCCTGAAGTCCAATCCGGTAGTCCATTTGCCA
ACCTCATCGCCCCCTTCGGAGAGTTCAGACACGGTTCCCCCGAAACCCAA
ATCCACAAGGCGTTCAACGTGGACAGTCAAGATAATGTTCTCCCAAAGAC
AAGGTGGTCCGCAACCACGGGAAGTGTGCTGGAGCAGATCTTGCAGGCAC
ATGGCGTCAAGACGGTTGTCATTGTATGTAAAGCGTGTCCCAACTAAGTA
ATGATGTGCTGACCATATGAATAGTCTGGGGTGACCCTTTCCGGCGTGGT
GATGGCTACGATTTATCGGCTATTTGATTTGGACTATAACGTCTATGTTA
TCAGGGAAAATGTCTTAGAGTTACCAATTGAGCAGCATTCGGCATTCGCG
AATGTAATGCTCGATATGTTGCTGCCGAAGATGGGCATCAAAGTCATCTC
CGTGGATGAGGCAATCAATGCTGTAAATTCTTCTTAGTGTGAGGATATGT
TAGATCGTGTTCAATCGGACTTCCTACTTAGTTGTA back to topCoding sequence (CDS) from alignment at ch7:460716..461451+ >KJC3_009466-T1 ID=KJC3_009466-T1|Name=KJC3_009466-T1|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch7:460716..461451+ (Aspergillus niger KJC3)
ATGGCTACTAACGGCTCTATCAATTTTGGCAAAAACTATGCCGTTCTAAA
CCTAGACTGGATTACGGTGCTTATCGACGCCGTCGAGGACACCCCTGAAG
GCCAAGCATTGATCGCAAACTACACCAAGTGGAACGATGCCGTTCATGCG
AGTTCATCACGTCCTCTAACCGTTTTCTCTACACTTTCCTTTTATCCCGG
CCAGCCTGAAGTCCAATCCGGTAGTCCATTTGCCAACCTCATCGCCCCCT
TCGGAGAGTTCAGACACGGTTCCCCCGAAACCCAAATCCACAAGGCGTTC
AACGTGGACAGTCAAGATAATGTTCTCCCAAAGACAAGGTGGTCCGCAAC
CACGGGAAGTGTGCTGGAGCAGATCTTGCAGGCACATGGCGTCAAGACGG
TTGTCATTTCTGGGGTGACCCTTTCCGGCGTGGTGATGGCTACGATTTAT
CGGCTATTTGATTTGGACTATAACGTCTATGTTATCAGGGAAAATGTCTT
AGAGTTACCAATTGAGCAGCATTCGGCATTCGCGAATGTAATGCTCGATA
TGTTGCTGCCGAAGATGGGCATCAAAGTCATCTCCGTGGATGAGGCAATC
AATGCTGTAAATTCTTCTTAGATGGCTACTAACGGCTCTATCAATTTTGG
CAAAAACTATGCCGTTCTAAACCTAGACTGGATTACGGTGCTTATCGACG
CCGTCGAGGACACCCCTGAAGGCCAAGCATTGATCGCAAACTACACCAAG
TGGAACGATGCCGTTCATGCGAGTTCATCACGTCCTCTAACCGTTTTCTC
TACACTTTCCTTTTATCCCGGCCAGCCTGAAGTCCAATCCGGTAGTCCAT
TTGCCAACCTCATCGCCCCCTTCGGAGAGTTCAGACACGGTTCCCCCGAA
ACCCAAATCCACAAGGCGTTCAACGTGGACAGTCAAGATAATGTTCTCCC
AAAGACAAGGTGGTCCGCAACCACGGGAAGTGTGCTGGAGCAGATCTTGC
AGGCACATGGCGTCAAGACGGTTGTCATTTCTGGGGTGACCCTTTCCGGC
GTGGTGATGGCTACGATTTATCGGCTATTTGATTTGGACTATAACGTCTA
TGTTATCAGGGAAAATGTCTTAGAGTTACCAATTGAGCAGCATTCGGCAT
TCGCGAATGTAATGCTCGATATGTTGCTGCCGAAGATGGGCATCAAAGTC
ATCTCCGTGGATGAGGCAATCAATGCTGTAAATTCTTCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009466-T1.utr5p1 | KJC3_009466-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009466-T1.utr3p1 | KJC3_009466-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036380 |
| DBxref | InterPro:IPR000868 |
| DBxref | PFAM:PF00857 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:460716..461451 + |
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