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KJC3_009473-T1, KJC3_009473-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009473-T1
Unique NameKJC3_009473-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:477820..479237-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009473-T1 ID=KJC3_009473-T1|Name=KJC3_009473-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1418bp|location=Sequence derived from alignment at ch7:477820..479237- (Aspergillus niger KJC3)
AAAATCCAAAAATCTCTGTTTCCTCCAACCTCAGGCCACATCATACCATG TCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGCATG CATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAAGAC TCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAGGCA CATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTCGCC AAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGCGCG TCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATTACG ACTAAAGGCGAGCCTCTTTTACGGTACTTCAATTCCCAATAATTATTGGC CTTCATAGAGAAACTAACTGTACTGGGTAATGTAGATTTTATTCGGTTGA CTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACCCCAACCGCTGCGGTC CGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGACCTGGTTCACGAGGAC AACGGGTCTACATTCGAATTACTTGTGAAATATGGGGCGAAGATGGATCC CGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCGATGCAGCTATCAAAT TTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACCACGACAATTTCTGCA GAATGGGGCACGCCGCTACATGTTGCAGCTCTCTTCGCCGATAAGGAGAT TATTAGAATGCTTCTCGACTTGGGAGCAGATCCGAACTCCCGATCATACT GTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTCGCCGAGTGGAAGATG CGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTATGTATCAAAGTGTCAT AGAGCTTCTCGGATCTACACAGATCGGAGTCTCTCTTCCTACAGTTGCTG CGTCGGAGAGGTCAAATACCGAGAGCGATACGGAGCCCCCTGCCGCGAAT AGAACGGAAATCAACGAACGACTCAATGCTGTCGACACTGGATTGTCAGG TTCTTTAACGGGTGACTCGAATTGGACTGGCTCCCAAAAGACCCAGAATA CCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTTAGTAGCCGGACACGC AGTCGTACCAAGACTGTCCCTTAGTTACGAACCTACTACGTATAAGTGTC CGCGGTGATGGTTTAGAGAGTGATAGGTTGGCTATTCGGGGAATACCATT CAAAAAGCTTCCGGGCATTCTATGATGCTGTGAGTCTGTTGATCCGCATG TGCTTTGGAGTGAGTATGGATGGGCTACTTGGTGGTAAAAATTAGATCTT AGAGACACGAGACGGGTACCCGCTGGAGCGAAGGGCTGCTCGTTGATAGC TTAAAGAGATTGGTAGTG
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Coding sequence (CDS) from alignment at ch7:477820..479237-

>KJC3_009473-T1 ID=KJC3_009473-T1|Name=KJC3_009473-T1|organism=Aspergillus niger KJC3|type=CDS|length=2130bp|location=Sequence derived from alignment at ch7:477820..479237- (Aspergillus niger KJC3)
ATTTTATTCGGTTGACTGTGCCCGGGAATTACTCGAGCGAGGCGTCGACC
CCAACCGCTGCGGTCCGAGAAAGATAAGCCCCCTCTCCAGCTCTCTTGAC
CTGGTTCACGAGGACAACGGGTCTACATTCGAATTACTTGTGAAATATGG
GGCGAAGATGGATCCCGGTCTCTTGTTTGATGCTCTTGTTTGGAGCAGCG
ATGCAGCTATCAAATTTCGTTTCCTTCTCTCCAAGGGTCTTGATCCGACC
ACGACAATTTCTGCAGAATGGGGCACGCCGCTACATGTTGCAGCTCTCTT
CGCCGATAAGGAGATTATTAGAATGCTTCTCGACTTGGGAGCAGATCCGA
ACTCCCGATCATACTGTATGAAGTTCAAAAATAAAACCCCCGTGGAAGTC
GCCGAGTGGAAGATGCGAGCTTCTCATGAAGGCTCTTCTATGAAGGGTAT
GTATCAAAGTGTCATAGAGCTTCTCGGATCTACACAGATCGGAGTCTCTC
TTCCTACAGTTGCTGCGTCGGAGAGGTCAAATACCGAGAGCGATACGGAG
CCCCCTGCCGCGAATAGAACGGAAATCAACGAACGACTCAATGCTGTCGA
CACTGGATTGTCAGGTTCTTTAACGGGTGACTCGAATTGGACTGGCTCCC
AAAAGACCCAGAATACCCGGAAGACACGAATTCCAGGGGAAGGCAGCGTT
AGTAGCCGGACACGCAGTCGTACCAAGACTGTCCCTTAGATGTCGCCCAA
CACCGCAGACGACGCTCTTTCATATAATTTTCAGAAGGCATGCATTGATG
GTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGCGGAAGACTCTCTGCT
AAGGATCTTGACACTGGACTAAGGATCAGTACTAAAGAGGCACATCCGGA
CATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTATGTCGCCAAATGCAA
TAGGCTGCCTCTGTGGGAATGATGCGAAACAGGACCCGCGCGTCATTCGC
CTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTGTATTACGACTAAAGG
CGAGCCTCTTTTACGATTTTATTCGGTTGACTGTGCCCGGGAATTACTCG
AGCGAGGCGTCGACCCCAACCGCTGCGGTCCGAGAAAGATAAGCCCCCTC
TCCAGCTCTCTTGACCTGGTTCACGAGGACAACGGGTCTACATTCGAATT
ACTTGTGAAATATGGGGCGAAGATGGATCCCGGTCTCTTGTTTGATGCTC
TTGTTTGGAGCAGCGATGCAGCTATCAAATTTCGTTTCCTTCTCTCCAAG
GGTCTTGATCCGACCACGACAATTTCTGCAGAATGGGGCACGCCGCTACA
TGTTGCAGCTCTCTTCGCCGATAAGGAGATTATTAGAATGCTTCTCGACT
TGGGAGCAGATCCGAACTCCCGATCATACTGTATGAAGTTCAAAAATAAA
ACCCCCGTGGAAGTCGCCGAGTGGAAGATGCGAGCTTCTCATGAAGGCTC
TTCTATGAAGGGTATGTATCAAAGTGTCATAGAGCTTCTCGGATCTACAC
AGATCGGAGTCTCTCTTCCTACAGTTGCTGCGTCGGAGAGGTCAAATACC
GAGAGCGATACGGAGCCCCCTGCCGCGAATAGAACGGAAATCAACGAACG
ACTCAATGCTGTCGACACTGGATTGTCAGGTTCTTTAACGGGTGACTCGA
ATTGGACTGGCTCCCAAAAGACCCAGAATACCCGGAAGACACGAATTCCA
GGGGAAGGCAGCGTTAGTAGCCGGACACGCAGTCGTACCAAGACTGTCCC
TTAGATGTCGCCCAACACCGCAGACGACGCTCTTTCATATAATTTTCAGA
AGGCATGCATTGATGGTAACCTTCGGGCAGTCCAGAGGGCTCTCGCCAGC
GGAAGACTCTCTGCTAAGGATCTTGACACTGGACTAAGGATCAGTACTAA
AGAGGCACATCCGGACATAGTAGCAGCTCTCTTTGAGGCAGGTGTGCCTA
TGTCGCCAAATGCAATAGGCTGCCTCTGTGGGAATGATGCGAAACAGGAC
CCGCGCGTCATTCGCCTCTACTTCGATCGTGGTCTGAAGCCTAGTGATTG
TATTACGACTAAAGGCGAGCCTCTTTTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009473KJC3_009473Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009473-T1KJC3_009473-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009473-T1.cdsKJC3_009473-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009473-T1.utr3p1KJC3_009473-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009473-T1.exon2KJC3_009473-T1.exon2Aspergillus niger KJC3exon
KJC3_009473-T1.exon1KJC3_009473-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009473-T1.utr5p1KJC3_009473-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:477820..479237 -