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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:522030..524185- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009485-T1 ID=KJC3_009485-T1|Name=KJC3_009485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2156bp|location=Sequence derived from alignment at ch7:522030..524185- (Aspergillus niger KJC3)
TATAAATCCACTCCACTCCGACGAACGCGTCTATCCTAGAATTTTTTCCA
CCTTATATTCAACTGCTCTCCGTGTTTGTCGCCATACACGACCTCCAACC
TCCGCCAACACCAGAAACATGGCGTTTATATACCAATATCGAGGCTTGCG
ACGATACGTGAACGAGCTGGTCGATGACGCCAGTCGCGCCCAGCACGAGT
CATCCTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGAGT
AAGATCAGAGATCCCTCTCAAATCCCTGGAATTTCCTTGAAATCGGATTG
TAACGGTGAAAAGTATTATGAGGTGTCCTGGGCAACTCCCCACGATCCCT
TCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCACCATGTGT
GTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCGATTCCGC
CGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTCGCCGAGT
CACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGCGCTTATT
GCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACATCGGCGC
TTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCTCCGAATT
TCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGGTTCTGCG
CCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTACCCTGGA
GAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGCGGACCCA
TCCTTGGTGAGTATCGTATAGTGTATCGCACAGCATCCACTCCACACCGC
CGGAAATTGAGGGTGTCGAGTCAAACTGACCATCGGACCGATCAGGACCC
GTTGTGGGAGCATACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTC
CGAATGGATCATGCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCC
TCTTCAAACGCGAAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAG
TTTTTCCGCGAAGCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGC
CTCGGGGTCGGGAAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTC
CTTGGCTACTTCTTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTG
ACCATTGTCTACATTGTCCTATTTACGTTCCTGGACGGGTATGCACCTGA
TCAACCGTTTGCATTGCTATCCACGGGCTCCACTAACTCGCTCAGATACG
TCTACATCTTCGCCGACACCTACGGCATCAACGAAGGCCTCGCCAACATT
TGCTTTCTGGGACTTTTCATTGGAATCCTCATCAGCATGGTCCTCGTCCC
TATCCTTTATCGCAAAACAGCCAAGCAGTTGCGAGACGCTGGCGATGATG
GCTCCGGTCGCATGGTGGACAGAGAGTCGCGACTCTTCTTCGCCCAAATC
GGAGCCCCAGCCATCCCGATCGGTCTTTTCTGGATGGGATGGACTGACTA
TGTACGATTACCTTTTTTCATCACCCTTTATGAATGTGTTCACTGCAAGA
TGCTAATAATACTAGCCTTCTATCGCGATTTGGTCCCCACTAGCCGCCTC
GATCGCTGTCGGTTTCGGCGTCATTTGTATCTTCCTTTCGGCCTACATGT
ACATCATCGACTCCTATCAACAATATGCAGCGTCGGCACTGACCTTTGTT
GCATTGGTTCGATACCTCGCTGCAGGCGGGATGACGGTGGTCGGGATCCC
GATGTATCGGAATCTTGGCACTCATTGGACGCTCACTGTTCTTGGGATTA
TCAGTGCGGTAGCTGCGCCTATTCCTTACGTACTGACCTTTTGGGGCCCG
TCACTGCGGAAGCGGAGTAAATGGGCCACGGCTATTTCGGCTTGAGTGTG
ATGCGACTTCCTTCGTGGACGTTATCTATTGCTGTGCAAGCATGGATGCC
ATGCCTTGAATGCGCGGTTTAACCCTTTTGGTGAACATACGTAGTAGGTT
GGGTTTATAAATATGATGGAGATAGGTATGAGTGGTCTGGGGATGTTGGG
TTGGGCGGAATGATAGAAGAGATATATAGTTTAGATGGGTGGTATAGAAC
AAGTTG back to topCoding sequence (CDS) from alignment at ch7:522030..524185- >KJC3_009485-T1 ID=KJC3_009485-T1|Name=KJC3_009485-T1|organism=Aspergillus niger KJC3|type=CDS|length=7485bp|location=Sequence derived from alignment at ch7:522030..524185- (Aspergillus niger KJC3)
CCTTCTATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTT
CGGCGTCATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCT
ATCAACAATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATAC
CTCGCTGCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCT
TGGCACTCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTG
CGCCTATTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGG
AGTAAATGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCG
ACACCTACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTT
TTCATTGGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAA
AACAGCCAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGG
TGGACAGAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATC
CCGATCGGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGA
GCATACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGAT
CATGCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAAC
GCGAAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGC
GAAGCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTC
GGGAAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTAC
TTCTTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTC
TACATTGTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCA
ACTCCCCACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGT
CGCCTCCACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCAT
CGGCCATCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTA
TCCCAAGTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGG
AGTCGGTGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTC
CCGTCTACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCT
GCGTTGGCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGG
ACTCTGTGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACG
TATGGAGTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCG
GGTTTTGGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTC
ATCCTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCT
TCTATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGG
CGTCATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATC
AACAATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTC
GCTGCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGG
CACTCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGC
CTATTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGT
AAATGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACA
CCTACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTC
ATTGGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAAC
AGCCAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGG
ACAGAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCG
ATCGGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCA
TACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCAT
GCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCG
AAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAA
GCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGG
AAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTC
TTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTAC
ATTGTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACT
CCCCACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGC
CTCCACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGG
CCATCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCC
CAAGTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGT
CGGTGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCG
TCTACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCG
TTGGCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACT
CTGTGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTAT
GGAGTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGT
TTTGGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATC
CTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCT
ATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGT
CATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAAC
AATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCT
GCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCAC
TCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTA
TTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAA
TGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCT
ACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATT
GGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGC
CAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACA
GAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATC
GGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATAC
ATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCT
CATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAA
CCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCG
ACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAG
CCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTA
TGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATT
GTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCC
CACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTC
CACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCA
TCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAA
GTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGG
TGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCT
ACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTG
GCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTG
TGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGA
GTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTT
GGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTC
CTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCTATC
GCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGTCAT
TTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAACAAT
ATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCTGCA
GGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCACTCA
TTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTATTC
CTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAATGG
GCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCTACG
GCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATTGGA
ATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGCCAA
GCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACAGAG
AGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATCGGT
CTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATACATC
GGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCTCAT
CTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAACCT
TTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCGACC
GGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAGCCT
GCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTATGG
AGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATTGTC
CTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCCCAC
GATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCAC
CATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCG
ATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTC
GCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGC
GCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACA
TCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCT
CCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGG
TTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTA
CCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGC
GGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTCCTC
CGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCTATCGCG
ATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGTCATTTG
TATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAACAATATG
CAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCTGCAGGC
GGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCACTCATTG
GACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTATTCCTT
ACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAATGGGCC
ACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCTACGGCA
TCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATTGGAATC
CTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGCCAAGCA
GTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACAGAGAGT
CGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATCGGTCTT
TTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATACATCGGA
TACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCTCATCTT
TGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAACCTTTG
CACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCGACCGGG
GACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAGCCTGCT
GCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTATGGAGC
CAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATTGTCCTA
TTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCCCACGAT
CCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCACCAT
GTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCGATT
CCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTCGCC
GAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGCGCT
TATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACATCG
GCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCTCCG
AATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGGTTC
TGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTACCC
TGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGCGGA
CCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTCCTCCGA
ACTCGCATCGCCGCAGCCTCTTGAACATCCACCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009485-T1.utr3p1 | KJC3_009485-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009485-T1.utr5p1 | KJC3_009485-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.4 |
| Note | antiSMASH:Cluster_7.3 |
| Note | SMCOG1005: EmrB/QacA |
| Note | SMCOG1005:Drug resistance transporter |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:522030..524185 - |
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