|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:522030..524185- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009485-T1 ID=KJC3_009485-T1|Name=KJC3_009485-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2156bp|location=Sequence derived from alignment at ch7:522030..524185- (Aspergillus niger KJC3) TATAAATCCACTCCACTCCGACGAACGCGTCTATCCTAGAATTTTTTCCA
CCTTATATTCAACTGCTCTCCGTGTTTGTCGCCATACACGACCTCCAACC
TCCGCCAACACCAGAAACATGGCGTTTATATACCAATATCGAGGCTTGCG
ACGATACGTGAACGAGCTGGTCGATGACGCCAGTCGCGCCCAGCACGAGT
CATCCTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGAGT
AAGATCAGAGATCCCTCTCAAATCCCTGGAATTTCCTTGAAATCGGATTG
TAACGGTGAAAAGTATTATGAGGTGTCCTGGGCAACTCCCCACGATCCCT
TCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCACCATGTGT
GTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCGATTCCGC
CGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTCGCCGAGT
CACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGCGCTTATT
GCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACATCGGCGC
TTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCTCCGAATT
TCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGGTTCTGCG
CCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTACCCTGGA
GAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGCGGACCCA
TCCTTGGTGAGTATCGTATAGTGTATCGCACAGCATCCACTCCACACCGC
CGGAAATTGAGGGTGTCGAGTCAAACTGACCATCGGACCGATCAGGACCC
GTTGTGGGAGCATACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTC
CGAATGGATCATGCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCC
TCTTCAAACGCGAAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAG
TTTTTCCGCGAAGCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGC
CTCGGGGTCGGGAAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTC
CTTGGCTACTTCTTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTG
ACCATTGTCTACATTGTCCTATTTACGTTCCTGGACGGGTATGCACCTGA
TCAACCGTTTGCATTGCTATCCACGGGCTCCACTAACTCGCTCAGATACG
TCTACATCTTCGCCGACACCTACGGCATCAACGAAGGCCTCGCCAACATT
TGCTTTCTGGGACTTTTCATTGGAATCCTCATCAGCATGGTCCTCGTCCC
TATCCTTTATCGCAAAACAGCCAAGCAGTTGCGAGACGCTGGCGATGATG
GCTCCGGTCGCATGGTGGACAGAGAGTCGCGACTCTTCTTCGCCCAAATC
GGAGCCCCAGCCATCCCGATCGGTCTTTTCTGGATGGGATGGACTGACTA
TGTACGATTACCTTTTTTCATCACCCTTTATGAATGTGTTCACTGCAAGA
TGCTAATAATACTAGCCTTCTATCGCGATTTGGTCCCCACTAGCCGCCTC
GATCGCTGTCGGTTTCGGCGTCATTTGTATCTTCCTTTCGGCCTACATGT
ACATCATCGACTCCTATCAACAATATGCAGCGTCGGCACTGACCTTTGTT
GCATTGGTTCGATACCTCGCTGCAGGCGGGATGACGGTGGTCGGGATCCC
GATGTATCGGAATCTTGGCACTCATTGGACGCTCACTGTTCTTGGGATTA
TCAGTGCGGTAGCTGCGCCTATTCCTTACGTACTGACCTTTTGGGGCCCG
TCACTGCGGAAGCGGAGTAAATGGGCCACGGCTATTTCGGCTTGAGTGTG
ATGCGACTTCCTTCGTGGACGTTATCTATTGCTGTGCAAGCATGGATGCC
ATGCCTTGAATGCGCGGTTTAACCCTTTTGGTGAACATACGTAGTAGGTT
GGGTTTATAAATATGATGGAGATAGGTATGAGTGGTCTGGGGATGTTGGG
TTGGGCGGAATGATAGAAGAGATATATAGTTTAGATGGGTGGTATAGAAC
AAGTTG back to topCoding sequence (CDS) from alignment at ch7:522030..524185- >KJC3_009485-T1 ID=KJC3_009485-T1|Name=KJC3_009485-T1|organism=Aspergillus niger KJC3|type=CDS|length=7485bp|location=Sequence derived from alignment at ch7:522030..524185- (Aspergillus niger KJC3) CCTTCTATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTT CGGCGTCATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCT ATCAACAATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATAC CTCGCTGCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCT TGGCACTCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTG CGCCTATTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGG AGTAAATGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCG ACACCTACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTT TTCATTGGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAA AACAGCCAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGG TGGACAGAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATC CCGATCGGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGA GCATACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGAT CATGCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAAC GCGAAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGC GAAGCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTC GGGAAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTAC TTCTTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTC TACATTGTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCA ACTCCCCACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGT CGCCTCCACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCAT CGGCCATCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTA TCCCAAGTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGG AGTCGGTGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTC CCGTCTACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCT GCGTTGGCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGG ACTCTGTGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACG TATGGAGTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCG GGTTTTGGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTC ATCCTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCT TCTATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGG CGTCATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATC AACAATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTC GCTGCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGG CACTCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGC CTATTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGT AAATGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACA CCTACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTC ATTGGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAAC AGCCAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGG ACAGAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCG ATCGGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCA TACATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCAT GCTCATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCG AAACCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAA GCGACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGG AAGCCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTC TTATGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTAC ATTGTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACT CCCCACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGC CTCCACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGG CCATCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCC CAAGTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGT CGGTGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCG TCTACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCG TTGGCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACT CTGTGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTAT GGAGTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGT TTTGGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATC CTCCTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCT ATCGCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGT CATTTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAAC AATATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCT GCAGGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCAC TCATTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTA TTCCTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAA TGGGCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCT ACGGCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATT GGAATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGC CAAGCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACA GAGAGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATC GGTCTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATAC ATCGGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCT CATCTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAA CCTTTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCG ACCGGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAG CCTGCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTA TGGAGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATT GTCCTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCC CACGATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTC CACCATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCA TCGATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAA GTCGCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGG TGCGCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCT ACATCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTG GCTCCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTG TGGTTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGA GTACCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTT GGCGGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTC CTCCGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCTATC GCGATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGTCAT TTGTATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAACAAT ATGCAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCTGCA GGCGGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCACTCA TTGGACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTATTC CTTACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAATGG GCCACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCTACG GCATCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATTGGA ATCCTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGCCAA GCAGTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACAGAG AGTCGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATCGGT CTTTTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATACATC GGATACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCTCAT CTTTGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAACCT TTGCACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCGACC GGGGACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAGCCT GCTGCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTATGG AGCCAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATTGTC CTATTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCCCAC GATCCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCAC CATGTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCG ATTCCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTC GCCGAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGC GCTTATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACA TCGGCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCT CCGAATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGG TTCTGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTA CCCTGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGC GGACCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTCCTC CGAACTCGCATCGCCGCAGCCTCTTGAACATCCACCGACCTTCTATCGCG ATTTGGTCCCCACTAGCCGCCTCGATCGCTGTCGGTTTCGGCGTCATTTG TATCTTCCTTTCGGCCTACATGTACATCATCGACTCCTATCAACAATATG CAGCGTCGGCACTGACCTTTGTTGCATTGGTTCGATACCTCGCTGCAGGC GGGATGACGGTGGTCGGGATCCCGATGTATCGGAATCTTGGCACTCATTG GACGCTCACTGTTCTTGGGATTATCAGTGCGGTAGCTGCGCCTATTCCTT ACGTACTGACCTTTTGGGGCCCGTCACTGCGGAAGCGGAGTAAATGGGCC ACGGCTATTTCGGCTTGAATACGTCTACATCTTCGCCGACACCTACGGCA TCAACGAAGGCCTCGCCAACATTTGCTTTCTGGGACTTTTCATTGGAATC CTCATCAGCATGGTCCTCGTCCCTATCCTTTATCGCAAAACAGCCAAGCA GTTGCGAGACGCTGGCGATGATGGCTCCGGTCGCATGGTGGACAGAGAGT CGCGACTCTTCTTCGCCCAAATCGGAGCCCCAGCCATCCCGATCGGTCTT TTCTGGATGGGATGGACTGACTATGACCCGTTGTGGGAGCATACATCGGA TACAGTCCCCGCATCAGCTGGAGATGGTCCGAATGGATCATGCTCATCTT TGATGGCCTGGTGATAGCCATAATTTTCCTCTTCAAACGCGAAACCTTTG CACCGCAACTCTTGTACTACAAAGCCAAGTTTTTCCGCGAAGCGACCGGG GACGCGCGATTCAAGACAGCCGGCGAGGCCTCGGGGTCGGGAAGCCTGCT GCCGGTACTGAAGAGGAACTTTACTCGTCCTTGGCTACTTCTTATGGAGC CAATCGTGATCTTCTTCACATTTTACTTGACCATTGTCTACATTGTCCTA TTTACGTTCCTGGACGGTATTATGAGGTGTCCTGGGCAACTCCCCACGAT CCCTTCAACCCGCAGCAATGGTCGCATGCCCGCCGAGTCGCCTCCACCAT GTGTGTCTGCCTGATCGCCTTGGTGACCACCATGGCATCGGCCATCGATT CCGCCGTTCTGTCCGAAGCCTCCCAGCACTTCGGAGTATCCCAAGTCGCC GAGTCACTCGCAACTGGTCTGTACCTTATCGGCTTCGGAGTCGGTGCGCT TATTGCCAGTCCGATGTCTGAAATTGTTGGCCGATTTCCCGTCTACATCG GCGCTTTGGTGATCTTCGGATCTTGGATTCTAGGTGCTGCGTTGGCTCCG AATTTCGGGTCCCAGTTGGTCTTTCGCTTTCTGGCAGGACTCTGTGGTTC TGCGCCCCTGACTGTTGCAGGTGGTTCGATATCCGACGTATGGAGTACCC TGGAGAAAACGTTCGGGTTCCCTATCTTTGCCATTCCGGGTTTTGGCGGA CCCATCCTTGATGACGCCAGTCGCGCCCAGCACGAGTCATCCTCCTCCGA ACTCGCATCGCCGCAGCCTCTTGAACATCCACCGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009485-T1.utr3p1 | KJC3_009485-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009485-T1.utr5p1 | KJC3_009485-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.4 |
Note | antiSMASH:Cluster_7.3 |
Note | SMCOG1005: EmrB/QacA |
Note | SMCOG1005:Drug resistance transporter |
DBxref | InterPro:IPR036259 |
DBxref | InterPro:IPR020846 |
DBxref | InterPro:IPR011701 |
DBxref | PFAM:PF07690 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:522030..524185 - |
|