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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:524451..525781- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009486-T2 ID=KJC3_009486-T2|Name=KJC3_009486-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1331bp|location=Sequence derived from alignment at ch7:524451..525781- (Aspergillus niger KJC3) ACTCTTTAATCAAACCGTCTCTCTCTCTGTTGAAATGATTTCCATCTTGT
AACCGTTTATACAGAGTTGTAAAATTCACGACAGGCATGGGTACTCCTAT
CACCGTGGGCGTGATAGGTGCAACGGGTAAAACAGGCCGGTCTGTGGTAG
ATGGCCTACTTTCCTCACCGACAAAATTCGTATGACATCCGAGTCGCATA
CTCGATATTTATGATCTTAACTGATGAGTCTAGCAGACTGTCACATCATT
TACCCGTGAGGCGTCAGTCAACAGCCAAGCCAACGAAACCCTCCAAGCAA
AAGGTGTCCAGATTGTCGGCTACGACCTGAACGGTCCCCGGGAGGTCCTA
GTACATCAACTAAAGAAAATCGATGTCCTAATCTCATGCATTACCTGGGA
ACATCTTGAATCTCAGAATCCATGGATCGAAGCCGCCAAAGAAGCAGGGG
TAAAGCGGTTCGTGCCATCGGAATGGGTTGGACCGGCACCCAGAGGCATC
ATCGACATCAAAGACAAGAAGCTTGACATCCTGGGCGTTATTCAACGCGT
GGGCCTTCCATACACTCTCATCGACGTCGGATGTTGGTTCCAGGTTTGGG
TACCCAAGATTTCCTCCGGTCGGTCGGACCACGCCCATTCGATTTACATT
GACCATCGGATCGTTGGCGATGGCAATCAGAAGTTTGGGTTGACGGATAT
GGGGGATATTGGGAAGTATGTCGCGCAGATTATATCAGATGCGCGGACGT
TAAATCGGCGTGTGTTTGCGTATACCGAGGTTCTGAGTATGAACGAGATT
TGGGATACGATGGCAACGGTCAGCGGGGAGATACCTCCGAGAGACTATGT
AAGTGGAAAAATTCGGTCTGGGATCGCATTAACCCATGGCTCCTATGAGT
GACGCGTTGACTTGATCCAACAGGTGTCAGAGGAAGACCTCAGGGAGATT
ATTGAATCGTGTGGGAAGAGGTGGCATGAGCATGGCGCTAAAGTCGATAT
CATGGACGTTGCCAATTACAACATGGGCCAATACCGCATATCATGGTGTA
TTCGAGGTGATAATACCCCGGAGTTTGCAGACTATCTCGGGTACCTCGAC
TTCTGGAAGCTGTTCCCAGACTTCCCAAAGGTCAGGTCGTTGAAGGCATT
CTACCAGCAGGTCGTCACGGGGCCCTGCGCGGGGTATGGACCAGCAACAT
CTGAATGAGTTGTCTGAGTATTATGATGATCTGAATCAATCGGCAAATCC
TTACCCTGACGTGTCTTACCATACACGTAGCAGATGGAATATTGTAGTCA
TTATACATACTTTTCACACGTAGTAGGAAAT back to topCoding sequence (CDS) from alignment at ch7:524451..525781- >KJC3_009486-T2 ID=KJC3_009486-T2|Name=KJC3_009486-T2|organism=Aspergillus niger KJC3|type=CDS|length=2970bp|location=Sequence derived from alignment at ch7:524451..525781- (Aspergillus niger KJC3) GTGTCAGAGGAAGACCTCAGGGAGATTATTGAATCGTGTGGGAAGAGGTG GCATGAGCATGGCGCTAAAGTCGATATCATGGACGTTGCCAATTACAACA TGGGCCAATACCGCATATCATGGTGTATTCGAGGTGATAATACCCCGGAG TTTGCAGACTATCTCGGGTACCTCGACTTCTGGAAGCTGTTCCCAGACTT CCCAAAGGTCAGGTCGTTGAAGGCATTCTACCAGCAGGTCGTCACGGGGC CCTGCGCGGGGTATGGACCAGCAACATCTGAATGAACTGTCACATCATTT ACCCGTGAGGCGTCAGTCAACAGCCAAGCCAACGAAACCCTCCAAGCAAA AGGTGTCCAGATTGTCGGCTACGACCTGAACGGTCCCCGGGAGGTCCTAG TACATCAACTAAAGAAAATCGATGTCCTAATCTCATGCATTACCTGGGAA CATCTTGAATCTCAGAATCCATGGATCGAAGCCGCCAAAGAAGCAGGGGT AAAGCGGTTCGTGCCATCGGAATGGGTTGGACCGGCACCCAGAGGCATCA TCGACATCAAAGACAAGAAGCTTGACATCCTGGGCGTTATTCAACGCGTG GGCCTTCCATACACTCTCATCGACGTCGGATGTTGGTTCCAGGTTTGGGT ACCCAAGATTTCCTCCGGTCGGTCGGACCACGCCCATTCGATTTACATTG ACCATCGGATCGTTGGCGATGGCAATCAGAAGTTTGGGTTGACGGATATG GGGGATATTGGGAAGTATGTCGCGCAGATTATATCAGATGCGCGGACGTT AAATCGGCGTGTGTTTGCGTATACCGAGGTTCTGAGTATGAACGAGATTT GGGATACGATGGCAACGGTCAGCGGGGAGATACCTCCGAGAGACTATATG GGTACTCCTATCACCGTGGGCGTGATAGGTGCAACGGGTAAAACAGGCCG GTCTGTGGTAGATGGCCTACTTTCCTCACCGACAAAATTCGTGTCAGAGG AAGACCTCAGGGAGATTATTGAATCGTGTGGGAAGAGGTGGCATGAGCAT GGCGCTAAAGTCGATATCATGGACGTTGCCAATTACAACATGGGCCAATA CCGCATATCATGGTGTATTCGAGGTGATAATACCCCGGAGTTTGCAGACT ATCTCGGGTACCTCGACTTCTGGAAGCTGTTCCCAGACTTCCCAAAGGTC AGGTCGTTGAAGGCATTCTACCAGCAGGTCGTCACGGGGCCCTGCGCGGG GTATGGACCAGCAACATCTGAATGAACTGTCACATCATTTACCCGTGAGG CGTCAGTCAACAGCCAAGCCAACGAAACCCTCCAAGCAAAAGGTGTCCAG ATTGTCGGCTACGACCTGAACGGTCCCCGGGAGGTCCTAGTACATCAACT AAAGAAAATCGATGTCCTAATCTCATGCATTACCTGGGAACATCTTGAAT CTCAGAATCCATGGATCGAAGCCGCCAAAGAAGCAGGGGTAAAGCGGTTC GTGCCATCGGAATGGGTTGGACCGGCACCCAGAGGCATCATCGACATCAA AGACAAGAAGCTTGACATCCTGGGCGTTATTCAACGCGTGGGCCTTCCAT ACACTCTCATCGACGTCGGATGTTGGTTCCAGGTTTGGGTACCCAAGATT TCCTCCGGTCGGTCGGACCACGCCCATTCGATTTACATTGACCATCGGAT CGTTGGCGATGGCAATCAGAAGTTTGGGTTGACGGATATGGGGGATATTG GGAAGTATGTCGCGCAGATTATATCAGATGCGCGGACGTTAAATCGGCGT GTGTTTGCGTATACCGAGGTTCTGAGTATGAACGAGATTTGGGATACGAT GGCAACGGTCAGCGGGGAGATACCTCCGAGAGACTATATGGGTACTCCTA TCACCGTGGGCGTGATAGGTGCAACGGGTAAAACAGGCCGGTCTGTGGTA GATGGCCTACTTTCCTCACCGACAAAATTCGTGTCAGAGGAAGACCTCAG GGAGATTATTGAATCGTGTGGGAAGAGGTGGCATGAGCATGGCGCTAAAG TCGATATCATGGACGTTGCCAATTACAACATGGGCCAATACCGCATATCA TGGTGTATTCGAGGTGATAATACCCCGGAGTTTGCAGACTATCTCGGGTA CCTCGACTTCTGGAAGCTGTTCCCAGACTTCCCAAAGGTCAGGTCGTTGA AGGCATTCTACCAGCAGGTCGTCACGGGGCCCTGCGCGGGGTATGGACCA GCAACATCTGAATGAACTGTCACATCATTTACCCGTGAGGCGTCAGTCAA CAGCCAAGCCAACGAAACCCTCCAAGCAAAAGGTGTCCAGATTGTCGGCT ACGACCTGAACGGTCCCCGGGAGGTCCTAGTACATCAACTAAAGAAAATC GATGTCCTAATCTCATGCATTACCTGGGAACATCTTGAATCTCAGAATCC ATGGATCGAAGCCGCCAAAGAAGCAGGGGTAAAGCGGTTCGTGCCATCGG AATGGGTTGGACCGGCACCCAGAGGCATCATCGACATCAAAGACAAGAAG CTTGACATCCTGGGCGTTATTCAACGCGTGGGCCTTCCATACACTCTCAT CGACGTCGGATGTTGGTTCCAGGTTTGGGTACCCAAGATTTCCTCCGGTC GGTCGGACCACGCCCATTCGATTTACATTGACCATCGGATCGTTGGCGAT GGCAATCAGAAGTTTGGGTTGACGGATATGGGGGATATTGGGAAGTATGT CGCGCAGATTATATCAGATGCGCGGACGTTAAATCGGCGTGTGTTTGCGT ATACCGAGGTTCTGAGTATGAACGAGATTTGGGATACGATGGCAACGGTC AGCGGGGAGATACCTCCGAGAGACTATATGGGTACTCCTATCACCGTGGG CGTGATAGGTGCAACGGGTAAAACAGGCCGGTCTGTGGTAGATGGCCTAC TTTCCTCACCGACAAAATTC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009486-T2.utr3p1 | KJC3_009486-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009486-T2.utr5p1 | KJC3_009486-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.4 |
Note | antiSMASH:Cluster_7.3 |
DBxref | InterPro:IPR036291 |
DBxref | InterPro:IPR008030 |
DBxref | PFAM:PF05368 |
DBxref | PFAM:PF13460 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:524451..525781 - |
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