|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:574740..575950- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009501-T1 ID=KJC3_009501-T1|Name=KJC3_009501-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1211bp|location=Sequence derived from alignment at ch7:574740..575950- (Aspergillus niger KJC3)
ATGATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTAT
CCAAGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAA
AACAGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCT
AGAAGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGTAGGTCATACCTG
ATTGGAGTCGCTGTACAAAACCACTGATAGATAATGACAATAGGCCGACC
TTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTC
TTCGCCGTTACCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAG
ACAAGGCATGAACGTAGCTGATGTTGCTAAGGTAAGACATACTAGCAGCA
TTGTGGAGATATACTAACATCAGCAGGAGCTGGATGTCAAACATCTTATT
TGGAGTAGCTTGCCCGGTATCTCGCGGAGTAAGTCTTTTTTCCCTTTAGT
CTACTGCGCCACATTCGTTGTTGTCAGCTGAGACTAACAAACAAATAGTC
ACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGT
TGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTG
CCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCA
CCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAAC
GGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCA
TCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGG
AAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGT
GGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATGG
CTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCT
CAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAG
CCACAAAGTAGGTAACTCAGAGGATCTTGATTCTGGACAGTACTGACTGC
TAATTCGCATTGTAATAGGTTTTGTTGGATCCCTTGACTACACTGGAGGA
AACACTGAGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATG
TAACTAAATAA back to topCoding sequence (CDS) from alignment at ch7:574740..575950- >KJC3_009501-T1 ID=KJC3_009501-T1|Name=KJC3_009501-T1|organism=Aspergillus niger KJC3|type=CDS|length=4890bp|location=Sequence derived from alignment at ch7:574740..575950- (Aspergillus niger KJC3)
GTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTGAGGAACAGCGC
GATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAAATAATCACCAA
TGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTGTTGACG
ACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTTGCCATC
TATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGCACCTCC
CTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAACGGTAC
CCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGCATCCTT
CTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGGGAAGGA
ATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTGTGGATA
TAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATGGCTGCC
AAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGCTCAGTA
TATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAAGCCACA
AAGAGCTGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGTATCTCG
CGGAGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCAAAGATG
CTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGATGCTGCC
GCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGATGATGTC
CCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCCAAGGTG
GCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAACAGTTC
AATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAGAAGTTT
AGCTCAGCAGGGTGCGGAGCTGATGAAGGTTTTGTTGGATCCCTTGACTA
CACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGTTGAAAAAT
GGGGTGGATGTAACTAAATAATCACCAATGATAGACTCACCGGAGTGGTG
CACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCTCTCAAT
CCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCTTCGAGA
TACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCATTCCCC
GAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCACTGCTGA
CCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGACGCTGG
GTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAAATCGTC
TCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGTGGATAA
GGAGACCTTCAAGGCTGGAATGGCTGCCAAGGGTTTCCCGAACGTCATTT
GTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGTTATTTC
GGTGGGGCAGGTTTCGAGGAAAGCCACAAAGAGCTGGATGTCAAACATCT
TATTTGGAGTAGCTTGCCCGGTATCTCGCGGAGCCGACCTTGAAGACAAA
GACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGCCGTTAC
CAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAGGCATGA
ACGTAGCTGATGTTGCTAAGATGATGTCCCAAGAAAAGAAGCTCTTCGTT
GTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGCGATTCT
GGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCACCAGAG
ACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGCTG
ATGAAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACTGAGGAA
CAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTAAATAAT
CACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAGCCCGTG
TTGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTCGCTCTT
GCCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCCGACAGC
ACCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCCAAACAA
CGGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTCAAGGGC
ATCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGTCGCCGG
GAAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTATGGGTG
TGGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCTGGAATG
GCTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCAGGCCGC
TCAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCGAGGAAA
GCCACAAAGAGCTGGATGTCAAACATCTTATTTGGAGTAGCTTGCCCGGT
ATCTCGCGGAGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGGCTCTCA
AAGATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACCTTTGAT
GCTGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGCTAAGAT
GATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGGGTATCC
AAGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCATCAAAA
CAGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGCTGCTAG
AAGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAGGTTTTGTTGGATCCCT
TGACTACACTGGAGGAAACACTGAGGAACAGCGCGATTTTGTCGCAGTTG
AAAAATGGGGTGGATGTAACTAAATAATCACCAATGATAGACTCACCGGA
GTGGTGCACTTTGACAACAAAGCCCGTGTTGACGACTATATCCGCGAGCT
CTCAATCCCACACACCATTGTCGCTCTTGCCATCTATGCTGCCTTTTTCT
TCGAGATACTGACACCCCTTCCGACAGCACCTCCCTCATACGTGCTAGCA
TTCCCCGAGCCAACAAGTGCCCAAACAACGGTACCCATTATTGACCCCAC
TGCTGACCTGGGTAAGTTTGTCAAGGGCATCCTTCTGAACCCCGGCAAGA
CGCTGGGTCAAAACTTTAATGTCGCCGGGAAGGAATATACTTTTGAGGAA
ATCGTCTCAGCCGCGAAGGGTATGGGTGTGGATATAAGTTTCCAACCGGT
GGATAAGGAGACCTTCAAGGCTGGAATGGCTGCCAAGGGTTTCCCGAACG
TCATTTGTGAGGGTGTATCTCAGGCCGCTCAGTATATTCATGAGTATGGT
TATTTCGGTGGGGCAGGTTTCGAGGAAAGCCACAAAGAGCTGGATGTCAA
ACATCTTATTTGGAGTAGCTTGCCCGGTATCTCGCGGAGCCGACCTTGAA
GACAAAGACTCTCTCCGCTTGGCTCTCAAAGATGCTTATGCTGTCTTCGC
CGTTACCAACTTCTGGGAGACCTTTGATGCTGCCGCCGAGACTAGACAAG
GCATGAACGTAGCTGATGTTGCTAAGATGATGTCCCAAGAAAAGAAGCTC
TTCGTTGTATTCGGTGCCACGGGTATCCAAGGTGGCTCGGTTGCTCGAGC
GATTCTGGCCGATCCTATCGCATCAAAACAGTTCAATGTCCGGGCCATCA
CCAGAGACCCTTCGAAGCCGGCTGCTAGAAGTTTAGCTCAGCAGGGTGCG
GAGCTGATGAAGGTTTTGTTGGATCCCTTGACTACACTGGAGGAAACACT
GAGGAACAGCGCGATTTTGTCGCAGTTGAAAAATGGGGTGGATGTAACTA
AATAATCACCAATGATAGACTCACCGGAGTGGTGCACTTTGACAACAAAG
CCCGTGTTGACGACTATATCCGCGAGCTCTCAATCCCACACACCATTGTC
GCTCTTGCCATCTATGCTGCCTTTTTCTTCGAGATACTGACACCCCTTCC
GACAGCACCTCCCTCATACGTGCTAGCATTCCCCGAGCCAACAAGTGCCC
AAACAACGGTACCCATTATTGACCCCACTGCTGACCTGGGTAAGTTTGTC
AAGGGCATCCTTCTGAACCCCGGCAAGACGCTGGGTCAAAACTTTAATGT
CGCCGGGAAGGAATATACTTTTGAGGAAATCGTCTCAGCCGCGAAGGGTA
TGGGTGTGGATATAAGTTTCCAACCGGTGGATAAGGAGACCTTCAAGGCT
GGAATGGCTGCCAAGGGTTTCCCGAACGTCATTTGTGAGGGTGTATCTCA
GGCCGCTCAGTATATTCATGAGTATGGTTATTTCGGTGGGGCAGGTTTCG
AGGAAAGCCACAAAGAGCTGGATGTCAAACATCTTATTTGGAGTAGCTTG
CCCGGTATCTCGCGGAGCCGACCTTGAAGACAAAGACTCTCTCCGCTTGG
CTCTCAAAGATGCTTATGCTGTCTTCGCCGTTACCAACTTCTGGGAGACC
TTTGATGCTGCCGCCGAGACTAGACAAGGCATGAACGTAGCTGATGTTGC
TAAGATGATGTCCCAAGAAAAGAAGCTCTTCGTTGTATTCGGTGCCACGG
GTATCCAAGGTGGCTCGGTTGCTCGAGCGATTCTGGCCGATCCTATCGCA
TCAAAACAGTTCAATGTCCGGGCCATCACCAGAGACCCTTCGAAGCCGGC
TGCTAGAAGTTTAGCTCAGCAGGGTGCGGAGCTGATGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.4 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:574740..575950 - |
|
