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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:580748..581485- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009505-T1 ID=KJC3_009505-T1|Name=KJC3_009505-T1|organism=Aspergillus niger KJC3|type=mRNA|length=738bp|location=Sequence derived from alignment at ch7:580748..581485- (Aspergillus niger KJC3)
GCCTCGTACTTGCACCATCTGCTTCTTAAGGCAGCTTACTACCCCTGATG
CTCTGAATGGACCCCAAGAGTGACAAAGAAGTGCATGATCGGGTATGTAT
GACGCTTCATCTAATGGTATTATGAATACCATATGCTCATCGTTCTGCAA
AGCCGCTTTCTGAGCGTGATAAGCGCATCCTCACTACCTATGGGAGGTTG
CCTTGTGGAGGTAGTCTTGGCCAGCAGCCTAAGGTATACTTGCACTGTGA
CCCCTCGTCATCGTTGCTGAATGCATTCAGAAACGGACCTACTTCGATTC
TGGGGACTATGCTCTCTCTGCTGCTCACCGAGTAACTGACAGCGGTGATA
TCATAACTGGCACGGCTCACCCTGTCCGCGAGAGCATTTCGCACCCCTTC
GCACCGGTACCGAGCACTGGCAATGCTGGTAACGAGGCTAACAATGGTAT
CTTTGAGGACAAAAGCCCAATTACACAGACTCCAAGGAGTCCTCTTTCCC
GGAACCCAAGCTTCAGTGATCAAGATATATAACCCTGGAGGACGGAAGGA
GAGCCTGAGGAGTTTGTAGATTGCTTCACGAAGGTTGTCAAAAATCAACC
CATCATGAGGGAGATGTTTGATCAGCTTCATTGTTTGACGTAAGAGGGAA
CACGCTGATTCATCCTGAAGCGTGTGGTATAGAATGCGTTTAACATTCAT
CCCTTAGCTTTCCAATCTTTCTTCAGATTGACCTGTAC back to topCoding sequence (CDS) from alignment at ch7:580748..581485- >KJC3_009505-T1 ID=KJC3_009505-T1|Name=KJC3_009505-T1|organism=Aspergillus niger KJC3|type=CDS|length=1107bp|location=Sequence derived from alignment at ch7:580748..581485- (Aspergillus niger KJC3)
AAACGGACCTACTTCGATTCTGGGGACTATGCTCTCTCTGCTGCTCACCG
AGTAACTGACAGCGGTGATATCATAACTGGCACGGCTCACCCTGTCCGCG
AGAGCATTTCGCACCCCTTCGCACCGGTACCGAGCACTGGCAATGCTGGT
AACGAGGCTAACAATGGTATCTTTGAGGACAAAAGCCCAATTACACAGAC
TCCAAGGAGTCCTCTTTCCCGGAACCCAAGCTTCAGTGATCAAGATATAT
AACCGCTTTCTGAGCGTGATAAGCGCATCCTCACTACCTATGGGAGGTTG
CCTTGTGGAGGTAGTCTTGGCCAGCAGCCTAAGATGGACCCCAAGAGTGA
CAAAGAAGTGCATGATCGGAAACGGACCTACTTCGATTCTGGGGACTATG
CTCTCTCTGCTGCTCACCGAGTAACTGACAGCGGTGATATCATAACTGGC
ACGGCTCACCCTGTCCGCGAGAGCATTTCGCACCCCTTCGCACCGGTACC
GAGCACTGGCAATGCTGGTAACGAGGCTAACAATGGTATCTTTGAGGACA
AAAGCCCAATTACACAGACTCCAAGGAGTCCTCTTTCCCGGAACCCAAGC
TTCAGTGATCAAGATATATAACCGCTTTCTGAGCGTGATAAGCGCATCCT
CACTACCTATGGGAGGTTGCCTTGTGGAGGTAGTCTTGGCCAGCAGCCTA
AGATGGACCCCAAGAGTGACAAAGAAGTGCATGATCGGAAACGGACCTAC
TTCGATTCTGGGGACTATGCTCTCTCTGCTGCTCACCGAGTAACTGACAG
CGGTGATATCATAACTGGCACGGCTCACCCTGTCCGCGAGAGCATTTCGC
ACCCCTTCGCACCGGTACCGAGCACTGGCAATGCTGGTAACGAGGCTAAC
AATGGTATCTTTGAGGACAAAAGCCCAATTACACAGACTCCAAGGAGTCC
TCTTTCCCGGAACCCAAGCTTCAGTGATCAAGATATATAACCGCTTTCTG
AGCGTGATAAGCGCATCCTCACTACCTATGGGAGGTTGCCTTGTGGAGGT
AGTCTTGGCCAGCAGCCTAAGATGGACCCCAAGAGTGACAAAGAAGTGCA
TGATCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009505-T1.utr3p1 | KJC3_009505-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009505-T1.utr5p1 | KJC3_009505-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.4 |
| DBxref | InterPro:IPR006760 |
| DBxref | PFAM:PF04667 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:580748..581485 - |
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