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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:618174..620287+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009518-T1 ID=KJC3_009518-T1|Name=KJC3_009518-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2114bp|location=Sequence derived from alignment at ch7:618174..620287+ (Aspergillus niger KJC3)
CCTCGCGTGACCCTACCATTACTGGCGATAGCCTACGCTAGATGGACCAG
GGATGAGATGGAGGTGCTGGTCGATTTACAACGACGTGGCTTGACCTTTG
GTCAGATTTCCACGCATTATCCCATTCCAGGCTGCCCTTCAAGGAATGCC
GCATCCTGCAGACACCAGTATGATCGTATTAAAAATGATCCATCCCCAAA
ACTGTCTGCCAGAGATAAGAACTATCTAGGGAGAATATACCAGGAGGTGT
TGAGGAAGTTACGGGATCCCGCACGCAGAAGACTACTCCTACATTTCAAG
GTCGCAAACCAGACACCTAAAGGTGATTGATTCTTGTTTTTATATAATTC
AAAATAAGCTAACTAAAGCAGAAATATATGATAGTTTTCCCGATATTATC
CGCTCAGTCGATTTCGACGAAACATACTCAATATTTATGTGCGTTATTGA
GGAAATGGAAAGTACTTGGAGGCGGGACAAGGATCTGTTGCAGAACCTCC
TCTACGTCCTTGAAATTGATATCGGGCATCAGAATGGACGTTTTGGTAAG
GCGGCGATCGGATTTACCTATTTATTGGATCTGACCTAATGCAGGACCGA
ACACCCCTATCTCAACAATGCTACTTCATGTGCCACTCGTTAATCAAGCG
GATTACGTTCATCCTTCTGAATTGAAGGATCCAAAGGAATACGCGTTGTA
CTATGAGAGTAAGATAGGACTGTTGAGTAAGGAGGCTTTACCACAGATAG
TGAAAGCGTCTATATCAAGGATTGACCCAGAATGGGAACCGAATCACCAA
CCCTTGTGGTGGCCGCTGATCCTGGGATTTCCGGTCCAGACGACAGAAGG
TTCGAGCTTGCTACTAATATTTATTTTCTAATCTGTTTTGCTAAATGATA
TTCCTAGACACGAGATATATTCTAAAATACATCCTTTGTGATCTTCACAA
GTTTGGAGTGAGGACTCAGCACCTTCAGCCTGTGACATCCTTGGCCTGGT
CCGAAAAAGATTCGCAACTACTACAGGAGATCATAGCTACCCGACAATAC
GAGGAAATGAACTTAATGTGGGTCCCTATGCTTGAATCTCAGTTGCTCAC
ATGGAAACACGCCATCGAGTGCTGCCTTACCCAGTGTATATAAAAGCAAG
CTAATATTTATGTCATGTTAGACCTTATACGGTCGAAAATACCCTATGCA
CTTCTGCCAGCGAGAGTGCCGCCCAGTCGCACGGATATGCGAATGGAGTC
AGCCCCGTTACTATCAATTCCGGCATATTCTGTATCACTAGTCAGTGTTG
GGACAAGGGTGCTTTAACGCAAGAGGGCCCTGTTCCATCTTACCATGCGA
CTCAACAGAATCAGGATCTCTTAGCTCACAAACTAGTAGAGATGTATGAC
GATTCTAGGTTCCAATCCAAACAAGAGAGTCCTTGTTATACACAACCTGC
AGTATCTGGCTCTTTCAACAACGCCGATTTCACGGGCAGAAGCCGAGACA
TGACAGAAGTATTGCCTCGGCCGACGAAGACTCTTCCTCCACTAGAATGG
GACAAAGATGATCCTGTTGCCGCTAAACTGGCCAGAAACACACTGGCAGC
ACGCAAATCGCGTGCTAGAATGACTTCTCGAGTGGAAAGGATGGGCCGCC
GCATTGCAGATCTGGAGTGGGAACTTAAAAAATCCCAGGAGGAGAAGAAA
TTCTGGATGGAACAGGCCCAAAATCGTGATCAGAGTTCTGCGCCGCCTAG
CAGAACTTTCCAGTCTACGCAAGTCATCTCGTCATCATCCAAAGTTTCCA
ACAGAGTCTTGATATCAAATTTAATTGAGCCTACCTCGACAGGCGCATGC
GAACCGCGAGACTGCATACCCTCGCTCGAGGCGAGAGCCTGCACATAAAG
AAGAGGTATATCAAGAGCGGGGGGGAATGGTACTAGTGCAAGTCGCATAC
AGGAGATTTCTTTCGTTGATCTGATCCTCCATAACACTCGGGTTGACCCT
GATATTCCAGATAATCAGGGCTTCGGTGGGCAGCGTTCAAGAGCGAAGTA
AAGGAGAGCCGATATTTAGTAAATGATATTGGTATTATAAACAGCGGCCT
TTTATGATTCCATT back to topCoding sequence (CDS) from alignment at ch7:618174..620287+ >KJC3_009518-T1 ID=KJC3_009518-T1|Name=KJC3_009518-T1|organism=Aspergillus niger KJC3|type=CDS|length=7905bp|location=Sequence derived from alignment at ch7:618174..620287+ (Aspergillus niger KJC3)
ATGGAGGTGCTGGTCGATTTACAACGACGTGGCTTGACCTTTGGTCAGAT
TTCCACGCATTATCCCATTCCAGGCTGCCCTTCAAGGAATGCCGCATCCT
GCAGACACCAGTATGATCGTATTAAAAATGATCCATCCCCAAAACTGTCT
GCCAGAGATAAGAACTATCTAGGGAGAATATACCAGGAGGTGTTGAGGAA
GTTACGGGATCCCGCACGCAGAAGACTACTCCTACATTTCAAGGTCGCAA
ACCAGACACCTAAAGAAATATATGATAGTTTTCCCGATATTATCCGCTCA
GTCGATTTCGACGAAACATACTCAATATTTATGTGCGTTATTGAGGAAAT
GGAAAGTACTTGGAGGCGGGACAAGGATCTGTTGCAGAACCTCCTCTACG
TCCTTGAAATTGATATCGGGCATCAGAATGGACGTTTTGGACCGAACACC
CCTATCTCAACAATGCTACTTCATGTGCCACTCGTTAATCAAGCGGATTA
CGTTCATCCTTCTGAATTGAAGGATCCAAAGGAATACGCGTTGTACTATG
AGAGTAAGATAGGACTGTTGAGTAAGGAGGCTTTACCACAGATAGTGAAA
GCGTCTATATCAAGGATTGACCCAGAATGGGAACCGAATCACCAACCCTT
GTGGTGGCCGCTGATCCTGGGATTTCCGGTCCAGACGACAGAAGACACGA
GATATATTCTAAAATACATCCTTTGTGATCTTCACAAGTTTGGAGTGAGG
ACTCAGCACCTTCAGCCTGTGACATCCTTGGCCTGGTCCGAAAAAGATTC
GCAACTACTACAGGAGATCATAGCTACCCGACAATACGAGGAAATGAACT
TAATACCTTATACGGTCGAAAATACCCTATGCACTTCTGCCAGCGAGAGT
GCCGCCCAGTCGCACGGATATGCGAATGGAGTCAGCCCCGTTACTATCAA
TTCCGGCATATTCTGTATCACTAGTCAGTGTTGGGACAAGGGTGCTTTAA
CGCAAGAGGGCCCTGTTCCATCTTACCATGCGACTCAACAGAATCAGGAT
CTCTTAGCTCACAAACTAGTAGAGATGTATGACGATTCTAGGTTCCAATC
CAAACAAGAGAGTCCTTGTTATACACAACCTGCAGTATCTGGCTCTTTCA
ACAACGCCGATTTCACGGGCAGAAGCCGAGACATGACAGAAGTATTGCCT
CGGCCGACGAAGACTCTTCCTCCACTAGAATGGGACAAAGATGATCCTGT
TGCCGCTAAACTGGCCAGAAACACACTGGCAGCACGCAAATCGCGTGCTA
GAATGACTTCTCGAGTGGAAAGGATGGGCCGCCGCATTGCAGATCTGGAG
TGGGAACTTAAAAAATCCCAGGAGGAGAAGAAATTCTGGATGGAACAGGC
CCAAAATCGTGATCAGAGTTCTGCGCCGCCTAGCAGAACTTTCCAGTCTA
CGCAAGTCATCTCGTCATCATCCAAAGTTTCCAACAGAGTCTTGATATCA
AATTTAATTGAGCCTACCTCGACAGGCGCATGCGAACCGCGAGACTGCAT
ACCCTCGCTCGAGGCGAGAGCCTGCACATAAATGGAGGTGCTGGTCGATT
TACAACGACGTGGCTTGACCTTTGGTCAGATTTCCACGCATTATCCCATT
CCAGGCTGCCCTTCAAGGAATGCCGCATCCTGCAGACACCAGTATGATCG
TATTAAAAATGATCCATCCCCAAAACTGTCTGCCAGAGATAAGAACTATC
TAGGGAGAATATACCAGGAGGTGTTGAGGAAGTTACGGGATCCCGCACGC
AGAAGACTACTCCTACATTTCAAGGTCGCAAACCAGACACCTAAAGAAAT
ATATGATAGTTTTCCCGATATTATCCGCTCAGTCGATTTCGACGAAACAT
ACTCAATATTTATGTGCGTTATTGAGGAAATGGAAAGTACTTGGAGGCGG
GACAAGGATCTGTTGCAGAACCTCCTCTACGTCCTTGAAATTGATATCGG
GCATCAGAATGGACGTTTTGGACCGAACACCCCTATCTCAACAATGCTAC
TTCATGTGCCACTCGTTAATCAAGCGGATTACGTTCATCCTTCTGAATTG
AAGGATCCAAAGGAATACGCGTTGTACTATGAGAGTAAGATAGGACTGTT
GAGTAAGGAGGCTTTACCACAGATAGTGAAAGCGTCTATATCAAGGATTG
ACCCAGAATGGGAACCGAATCACCAACCCTTGTGGTGGCCGCTGATCCTG
GGATTTCCGGTCCAGACGACAGAAGACACGAGATATATTCTAAAATACAT
CCTTTGTGATCTTCACAAGTTTGGAGTGAGGACTCAGCACCTTCAGCCTG
TGACATCCTTGGCCTGGTCCGAAAAAGATTCGCAACTACTACAGGAGATC
ATAGCTACCCGACAATACGAGGAAATGAACTTAATACCTTATACGGTCGA
AAATACCCTATGCACTTCTGCCAGCGAGAGTGCCGCCCAGTCGCACGGAT
ATGCGAATGGAGTCAGCCCCGTTACTATCAATTCCGGCATATTCTGTATC
ACTAGTCAGTGTTGGGACAAGGGTGCTTTAACGCAAGAGGGCCCTGTTCC
ATCTTACCATGCGACTCAACAGAATCAGGATCTCTTAGCTCACAAACTAG
TAGAGATGTATGACGATTCTAGGTTCCAATCCAAACAAGAGAGTCCTTGT
TATACACAACCTGCAGTATCTGGCTCTTTCAACAACGCCGATTTCACGGG
CAGAAGCCGAGACATGACAGAAGTATTGCCTCGGCCGACGAAGACTCTTC
CTCCACTAGAATGGGACAAAGATGATCCTGTTGCCGCTAAACTGGCCAGA
AACACACTGGCAGCACGCAAATCGCGTGCTAGAATGACTTCTCGAGTGGA
AAGGATGGGCCGCCGCATTGCAGATCTGGAGTGGGAACTTAAAAAATCCC
AGGAGGAGAAGAAATTCTGGATGGAACAGGCCCAAAATCGTGATCAGAGT
TCTGCGCCGCCTAGCAGAACTTTCCAGTCTACGCAAGTCATCTCGTCATC
ATCCAAAGTTTCCAACAGAGTCTTGATATCAAATTTAATTGAGCCTACCT
CGACAGGCGCATGCGAACCGCGAGACTGCATACCCTCGCTCGAGGCGAGA
GCCTGCACATAAATGGAGGTGCTGGTCGATTTACAACGACGTGGCTTGAC
CTTTGGTCAGATTTCCACGCATTATCCCATTCCAGGCTGCCCTTCAAGGA
ATGCCGCATCCTGCAGACACCAGTATGATCGTATTAAAAATGATCCATCC
CCAAAACTGTCTGCCAGAGATAAGAACTATCTAGGGAGAATATACCAGGA
GGTGTTGAGGAAGTTACGGGATCCCGCACGCAGAAGACTACTCCTACATT
TCAAGGTCGCAAACCAGACACCTAAAGAAATATATGATAGTTTTCCCGAT
ATTATCCGCTCAGTCGATTTCGACGAAACATACTCAATATTTATGTGCGT
TATTGAGGAAATGGAAAGTACTTGGAGGCGGGACAAGGATCTGTTGCAGA
ACCTCCTCTACGTCCTTGAAATTGATATCGGGCATCAGAATGGACGTTTT
GGACCGAACACCCCTATCTCAACAATGCTACTTCATGTGCCACTCGTTAA
TCAAGCGGATTACGTTCATCCTTCTGAATTGAAGGATCCAAAGGAATACG
CGTTGTACTATGAGAGTAAGATAGGACTGTTGAGTAAGGAGGCTTTACCA
CAGATAGTGAAAGCGTCTATATCAAGGATTGACCCAGAATGGGAACCGAA
TCACCAACCCTTGTGGTGGCCGCTGATCCTGGGATTTCCGGTCCAGACGA
CAGAAGACACGAGATATATTCTAAAATACATCCTTTGTGATCTTCACAAG
TTTGGAGTGAGGACTCAGCACCTTCAGCCTGTGACATCCTTGGCCTGGTC
CGAAAAAGATTCGCAACTACTACAGGAGATCATAGCTACCCGACAATACG
AGGAAATGAACTTAATACCTTATACGGTCGAAAATACCCTATGCACTTCT
GCCAGCGAGAGTGCCGCCCAGTCGCACGGATATGCGAATGGAGTCAGCCC
CGTTACTATCAATTCCGGCATATTCTGTATCACTAGTCAGTGTTGGGACA
AGGGTGCTTTAACGCAAGAGGGCCCTGTTCCATCTTACCATGCGACTCAA
CAGAATCAGGATCTCTTAGCTCACAAACTAGTAGAGATGTATGACGATTC
TAGGTTCCAATCCAAACAAGAGAGTCCTTGTTATACACAACCTGCAGTAT
CTGGCTCTTTCAACAACGCCGATTTCACGGGCAGAAGCCGAGACATGACA
GAAGTATTGCCTCGGCCGACGAAGACTCTTCCTCCACTAGAATGGGACAA
AGATGATCCTGTTGCCGCTAAACTGGCCAGAAACACACTGGCAGCACGCA
AATCGCGTGCTAGAATGACTTCTCGAGTGGAAAGGATGGGCCGCCGCATT
GCAGATCTGGAGTGGGAACTTAAAAAATCCCAGGAGGAGAAGAAATTCTG
GATGGAACAGGCCCAAAATCGTGATCAGAGTTCTGCGCCGCCTAGCAGAA
CTTTCCAGTCTACGCAAGTCATCTCGTCATCATCCAAAGTTTCCAACAGA
GTCTTGATATCAAATTTAATTGAGCCTACCTCGACAGGCGCATGCGAACC
GCGAGACTGCATACCCTCGCTCGAGGCGAGAGCCTGCACATAAATGGAGG
TGCTGGTCGATTTACAACGACGTGGCTTGACCTTTGGTCAGATTTCCACG
CATTATCCCATTCCAGGCTGCCCTTCAAGGAATGCCGCATCCTGCAGACA
CCAGTATGATCGTATTAAAAATGATCCATCCCCAAAACTGTCTGCCAGAG
ATAAGAACTATCTAGGGAGAATATACCAGGAGGTGTTGAGGAAGTTACGG
GATCCCGCACGCAGAAGACTACTCCTACATTTCAAGGTCGCAAACCAGAC
ACCTAAAGAAATATATGATAGTTTTCCCGATATTATCCGCTCAGTCGATT
TCGACGAAACATACTCAATATTTATGTGCGTTATTGAGGAAATGGAAAGT
ACTTGGAGGCGGGACAAGGATCTGTTGCAGAACCTCCTCTACGTCCTTGA
AATTGATATCGGGCATCAGAATGGACGTTTTGGACCGAACACCCCTATCT
CAACAATGCTACTTCATGTGCCACTCGTTAATCAAGCGGATTACGTTCAT
CCTTCTGAATTGAAGGATCCAAAGGAATACGCGTTGTACTATGAGAGTAA
GATAGGACTGTTGAGTAAGGAGGCTTTACCACAGATAGTGAAAGCGTCTA
TATCAAGGATTGACCCAGAATGGGAACCGAATCACCAACCCTTGTGGTGG
CCGCTGATCCTGGGATTTCCGGTCCAGACGACAGAAGACACGAGATATAT
TCTAAAATACATCCTTTGTGATCTTCACAAGTTTGGAGTGAGGACTCAGC
ACCTTCAGCCTGTGACATCCTTGGCCTGGTCCGAAAAAGATTCGCAACTA
CTACAGGAGATCATAGCTACCCGACAATACGAGGAAATGAACTTAATACC
TTATACGGTCGAAAATACCCTATGCACTTCTGCCAGCGAGAGTGCCGCCC
AGTCGCACGGATATGCGAATGGAGTCAGCCCCGTTACTATCAATTCCGGC
ATATTCTGTATCACTAGTCAGTGTTGGGACAAGGGTGCTTTAACGCAAGA
GGGCCCTGTTCCATCTTACCATGCGACTCAACAGAATCAGGATCTCTTAG
CTCACAAACTAGTAGAGATGTATGACGATTCTAGGTTCCAATCCAAACAA
GAGAGTCCTTGTTATACACAACCTGCAGTATCTGGCTCTTTCAACAACGC
CGATTTCACGGGCAGAAGCCGAGACATGACAGAAGTATTGCCTCGGCCGA
CGAAGACTCTTCCTCCACTAGAATGGGACAAAGATGATCCTGTTGCCGCT
AAACTGGCCAGAAACACACTGGCAGCACGCAAATCGCGTGCTAGAATGAC
TTCTCGAGTGGAAAGGATGGGCCGCCGCATTGCAGATCTGGAGTGGGAAC
TTAAAAAATCCCAGGAGGAGAAGAAATTCTGGATGGAACAGGCCCAAAAT
CGTGATCAGAGTTCTGCGCCGCCTAGCAGAACTTTCCAGTCTACGCAAGT
CATCTCGTCATCATCCAAAGTTTCCAACAGAGTCTTGATATCAAATTTAA
TTGAGCCTACCTCGACAGGCGCATGCGAACCGCGAGACTGCATACCCTCG
CTCGAGGCGAGAGCCTGCACATAAATGGAGGTGCTGGTCGATTTACAACG
ACGTGGCTTGACCTTTGGTCAGATTTCCACGCATTATCCCATTCCAGGCT
GCCCTTCAAGGAATGCCGCATCCTGCAGACACCAGTATGATCGTATTAAA
AATGATCCATCCCCAAAACTGTCTGCCAGAGATAAGAACTATCTAGGGAG
AATATACCAGGAGGTGTTGAGGAAGTTACGGGATCCCGCACGCAGAAGAC
TACTCCTACATTTCAAGGTCGCAAACCAGACACCTAAAGAAATATATGAT
AGTTTTCCCGATATTATCCGCTCAGTCGATTTCGACGAAACATACTCAAT
ATTTATGTGCGTTATTGAGGAAATGGAAAGTACTTGGAGGCGGGACAAGG
ATCTGTTGCAGAACCTCCTCTACGTCCTTGAAATTGATATCGGGCATCAG
AATGGACGTTTTGGACCGAACACCCCTATCTCAACAATGCTACTTCATGT
GCCACTCGTTAATCAAGCGGATTACGTTCATCCTTCTGAATTGAAGGATC
CAAAGGAATACGCGTTGTACTATGAGAGTAAGATAGGACTGTTGAGTAAG
GAGGCTTTACCACAGATAGTGAAAGCGTCTATATCAAGGATTGACCCAGA
ATGGGAACCGAATCACCAACCCTTGTGGTGGCCGCTGATCCTGGGATTTC
CGGTCCAGACGACAGAAGACACGAGATATATTCTAAAATACATCCTTTGT
GATCTTCACAAGTTTGGAGTGAGGACTCAGCACCTTCAGCCTGTGACATC
CTTGGCCTGGTCCGAAAAAGATTCGCAACTACTACAGGAGATCATAGCTA
CCCGACAATACGAGGAAATGAACTTAATACCTTATACGGTCGAAAATACC
CTATGCACTTCTGCCAGCGAGAGTGCCGCCCAGTCGCACGGATATGCGAA
TGGAGTCAGCCCCGTTACTATCAATTCCGGCATATTCTGTATCACTAGTC
AGTGTTGGGACAAGGGTGCTTTAACGCAAGAGGGCCCTGTTCCATCTTAC
CATGCGACTCAACAGAATCAGGATCTCTTAGCTCACAAACTAGTAGAGAT
GTATGACGATTCTAGGTTCCAATCCAAACAAGAGAGTCCTTGTTATACAC
AACCTGCAGTATCTGGCTCTTTCAACAACGCCGATTTCACGGGCAGAAGC
CGAGACATGACAGAAGTATTGCCTCGGCCGACGAAGACTCTTCCTCCACT
AGAATGGGACAAAGATGATCCTGTTGCCGCTAAACTGGCCAGAAACACAC
TGGCAGCACGCAAATCGCGTGCTAGAATGACTTCTCGAGTGGAAAGGATG
GGCCGCCGCATTGCAGATCTGGAGTGGGAACTTAAAAAATCCCAGGAGGA
GAAGAAATTCTGGATGGAACAGGCCCAAAATCGTGATCAGAGTTCTGCGC
CGCCTAGCAGAACTTTCCAGTCTACGCAAGTCATCTCGTCATCATCCAAA
GTTTCCAACAGAGTCTTGATATCAAATTTAATTGAGCCTACCTCGACAGG
CGCATGCGAACCGCGAGACTGCATACCCTCGCTCGAGGCGAGAGCCTGCA
CATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009518-T1.utr5p1 | KJC3_009518-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009518-T1.utr3p1 | KJC3_009518-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004827 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:618174..620287 + |
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