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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:620438..622646+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009519-T2 ID=KJC3_009519-T2|Name=KJC3_009519-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2209bp|location=Sequence derived from alignment at ch7:620438..622646+ (Aspergillus niger KJC3)
ACTTTCCATCGACTTCCCATCGACTTCCCATCGACTTCCCATCGACTTCC
CATCGACTTCCCATCGACTTCCCATCGACTTCCCATCGACTTCCCATCAA
CTTCCCATCAACTTCCCATCGACTTCCCATCCACCAAGACATAGCCTTGC
CCCGATGCCACTCACACCATATCACTTTTGTGATGGCTTAGGTCGACAGC
GAACTAGTTATCGCCGTGGCGTACCACTGGAAGATACAAAATTTTTTCAT
CAAACATATTTCCACACCTACAACGAGTCTCTCACGTCCGATAAAAGGAA
AATTAGACGTCGCCTTCAAAAGATCCGGGAATTAAGTGAATATGTCTGGA
TTCTCGTGGCCAGAAGTTTTACCTCCACCGATATTGCAGACCTTCGAAAA
TTTAATGAATACATTTCGGCAGTCATGACCTGGATGAAGATCCATCCTAT
TCTTGAAGAAGAGGAAGAACGGGCCCGTGATCTATTTGAAGCCTTGGACG
ATAAGAAGGTTGAAATAATCAAGAGTAAGGCATAATAGTAAGGCTTTAAA
TGTGGCTAATATTATCTAGATGGGGAAAATACAAGGAATAAGGTTCCTCG
AAGAACTAAATCAGATTTGAACTGTATGTGACCAGGCTTTTTTTCTTCAA
CTTCCACTACTAATATTATCAGTATTCTCTATAGAAAAGGAAAACATCAG
GATGCCAGGTTTTAATAACGGTCAGCAGCAAGGTAGGCCCTAAGACGTCA
AGGCAAGGCTATAAGCTAATAAATCCTCAGCTCCGATATCAATCGACATC
AACCCAGGTGATAGCGAAAGCGCGAAAGGTATCCAAGACTTTCTCTTGTC
TATAAAGCGGGAGTGTTCAGACTCAGCAAGTGGCCCAATCTGCATAGCAT
CAGAAGAAGAACTATGCAAAAACCTGAAAGACTTATTCTCGAAACCCGTA
TTTTGGCAATCATTTACCAGTCAATACCCTCTTCCTGGTGATATGCCTAC
CTCAATACCTGACTTCCTTGCTTTTCTCGCACATATCAACGTCCAAAAAT
TAGAGGCAATTGACTATTTTGAGGATGCAGCAAAGCCCAAAGAAAAACAA
ATTGCTGAGATAGCTCAGTATTTCAACTCACCTCCAACAACTCGCTCGGC
GTTGAACTTTCTTGATATGAAGAATGTTTTTCTTCCTTGTGTCCCCGTGC
CTGTGCGCCAAGCAGATCTGCTAGGAACGGCATATTTACGCAAGCGAGGA
TCGGTGTCCAAGTCCATGCCAAATAATACAGCAATGCCCCCAGGGCGAGA
GTTCCTTCTTCTATCTGGCCGAAACTCGGTCTCCCCGATCCACGTTGATA
CTGCGGGCCAATTAACTTGGATTATCGGTATTTGCGGCCGCAAAGTCTGG
TATGTACCTAGTGATCTCAACTTGGCTGCCCACCGACTTGCAACAGGAGG
AAGTCAATTTCCAGAGCACTATGAAGGAGGATGGATGCGCATTATTATTG
AGCCTGGTGACCTTCTGTGAGTTGTACCCTATTGTTAGGCTTATATATAG
TGTTAGGCTAATTTAAGAAGTATTATGCCACCGGGCTGCCCACATGCCGT
GTTCACCCCTGAAGACTCACTGACCGCTGGAGGTAACTTTTATACCAGTC
CGCATCTTGGCACAACAATCACTACTACTGCTCTACAAGCCCGCTACGGG
AGCATATTCTGCAACGAGAAGCTATCTTTGCAGGACTATTCACATATTGC
GCTGGTCCTTGAGCAGTGCCAGGGATCTTTCTCGAATGCAGACCTGGCAC
GGTTGGCAGCAAGCGAACCACACTGGGATATTGCAGACCCCCTTAATGTT
AAGGTGGAGGCTTTGTCCAGGGATAATGCCGATAATTCTGCCACCTGCTC
TGAAGGTGAAAGTCCTGTCGAAGGTCGCGAGGATGACAGCAGGAAGCGAG
CGAGAACTGTGAAGAAAGGTGGTAAGGGTGGTAGTAGGAAACGAGGGAGA
ACCGTCAAGGAAAATGCCTCGATCAACACCAAAGACCACATGTTATGGCT
TCGGGTACTTCAATATATTCGGCGGGCAGCCACCGAGCTTGAGGTGCGTC
TGACAAAGGGTGACTCTTGATAAATAGATTTAGTTATTTAAGGGGGATCG
AGTAGCTTTACTTTGTCTTTAATTATTTTCCACCTACTCTTCCTTAATTT
GCATGAGGG back to topCoding sequence (CDS) from alignment at ch7:620438..622646+ >KJC3_009519-T2 ID=KJC3_009519-T2|Name=KJC3_009519-T2|organism=Aspergillus niger KJC3|type=CDS|length=3951bp|location=Sequence derived from alignment at ch7:620438..622646+ (Aspergillus niger KJC3)
ATGCCAGGTTTTAATAACGGTCAGCAGCAAGCTCCGATATCAATCGACAT
CAACCCAGGTGATAGCGAAAGCGCGAAAGGTATCCAAGACTTTCTCTTGT
CTATAAAGCGGGAGTGTTCAGACTCAGCAAGTGGCCCAATCTGCATAGCA
TCAGAAGAAGAACTATGCAAAAACCTGAAAGACTTATTCTCGAAACCCGT
ATTTTGGCAATCATTTACCAGTCAATACCCTCTTCCTGGTGATATGCCTA
CCTCAATACCTGACTTCCTTGCTTTTCTCGCACATATCAACGTCCAAAAA
TTAGAGGCAATTGACTATTTTGAGGATGCAGCAAAGCCCAAAGAAAAACA
AATTGCTGAGATAGCTCAGTATTTCAACTCACCTCCAACAACTCGCTCGG
CGTTGAACTTTCTTGATATGAAGAATGTTTTTCTTCCTTGTGTCCCCGTG
CCTGTGCGCCAAGCAGATCTGCTAGGAACGGCATATTTACGCAAGCGAGG
ATCGGTGTCCAAGTCCATGCCAAATAATACAGCAATGCCCCCAGGGCGAG
AGTTCCTTCTTCTATCTGGCCGAAACTCGGTCTCCCCGATCCACGTTGAT
ACTGCGGGCCAATTAACTTGGATTATCGGTATTTGCGGCCGCAAAGTCTG
GTATGTACCTAGTGATCTCAACTTGGCTGCCCACCGACTTGCAACAGGAG
GAAGTCAATTTCCAGAGCACTATGAAGGAGGATGGATGCGCATTATTATT
GAGCCTGGTGACCTTCTTATTATGCCACCGGGCTGCCCACATGCCGTGTT
CACCCCTGAAGACTCACTGACCGCTGGAGGTAACTTTTATACCAGTCCGC
ATCTTGGCACAACAATCACTACTACTGCTCTACAAGCCCGCTACGGGAGC
ATATTCTGCAACGAGAAGCTATCTTTGCAGGACTATTCACATATTGCGCT
GGTCCTTGAGCAGTGCCAGGGATCTTTCTCGAATGCAGACCTGGCACGGT
TGGCAGCAAGCGAACCACACTGGGATATTGCAGACCCCCTTAATGTTAAG
GTGGAGGCTTTGTCCAGGGATAATGCCGATAATTCTGCCACCTGCTCTGA
AGGTGAAAGTCCTGTCGAAGGTCGCGAGGATGACAGCAGGAAGCGAGCGA
GAACTGTGAAGAAAGGTGGTAAGGGTGGTAGTAGGAAACGAGGGAGAACC
GTCAAGGAAAATGCCTCGATCAACACCAAAGACCACATGTTATGGCTTCG
GGTACTTCAATATATTCGGCGGGCAGCCACCGAGCTTGAGGTGCGTCTGA
CAAAGGGTGACTCTTGAATGCCAGGTTTTAATAACGGTCAGCAGCAAGCT
CCGATATCAATCGACATCAACCCAGGTGATAGCGAAAGCGCGAAAGGTAT
CCAAGACTTTCTCTTGTCTATAAAGCGGGAGTGTTCAGACTCAGCAAGTG
GCCCAATCTGCATAGCATCAGAAGAAGAACTATGCAAAAACCTGAAAGAC
TTATTCTCGAAACCCGTATTTTGGCAATCATTTACCAGTCAATACCCTCT
TCCTGGTGATATGCCTACCTCAATACCTGACTTCCTTGCTTTTCTCGCAC
ATATCAACGTCCAAAAATTAGAGGCAATTGACTATTTTGAGGATGCAGCA
AAGCCCAAAGAAAAACAAATTGCTGAGATAGCTCAGTATTTCAACTCACC
TCCAACAACTCGCTCGGCGTTGAACTTTCTTGATATGAAGAATGTTTTTC
TTCCTTGTGTCCCCGTGCCTGTGCGCCAAGCAGATCTGCTAGGAACGGCA
TATTTACGCAAGCGAGGATCGGTGTCCAAGTCCATGCCAAATAATACAGC
AATGCCCCCAGGGCGAGAGTTCCTTCTTCTATCTGGCCGAAACTCGGTCT
CCCCGATCCACGTTGATACTGCGGGCCAATTAACTTGGATTATCGGTATT
TGCGGCCGCAAAGTCTGGTATGTACCTAGTGATCTCAACTTGGCTGCCCA
CCGACTTGCAACAGGAGGAAGTCAATTTCCAGAGCACTATGAAGGAGGAT
GGATGCGCATTATTATTGAGCCTGGTGACCTTCTTATTATGCCACCGGGC
TGCCCACATGCCGTGTTCACCCCTGAAGACTCACTGACCGCTGGAGGTAA
CTTTTATACCAGTCCGCATCTTGGCACAACAATCACTACTACTGCTCTAC
AAGCCCGCTACGGGAGCATATTCTGCAACGAGAAGCTATCTTTGCAGGAC
TATTCACATATTGCGCTGGTCCTTGAGCAGTGCCAGGGATCTTTCTCGAA
TGCAGACCTGGCACGGTTGGCAGCAAGCGAACCACACTGGGATATTGCAG
ACCCCCTTAATGTTAAGGTGGAGGCTTTGTCCAGGGATAATGCCGATAAT
TCTGCCACCTGCTCTGAAGGTGAAAGTCCTGTCGAAGGTCGCGAGGATGA
CAGCAGGAAGCGAGCGAGAACTGTGAAGAAAGGTGGTAAGGGTGGTAGTA
GGAAACGAGGGAGAACCGTCAAGGAAAATGCCTCGATCAACACCAAAGAC
CACATGTTATGGCTTCGGGTACTTCAATATATTCGGCGGGCAGCCACCGA
GCTTGAGGTGCGTCTGACAAAGGGTGACTCTTGAATGCCAGGTTTTAATA
ACGGTCAGCAGCAAGCTCCGATATCAATCGACATCAACCCAGGTGATAGC
GAAAGCGCGAAAGGTATCCAAGACTTTCTCTTGTCTATAAAGCGGGAGTG
TTCAGACTCAGCAAGTGGCCCAATCTGCATAGCATCAGAAGAAGAACTAT
GCAAAAACCTGAAAGACTTATTCTCGAAACCCGTATTTTGGCAATCATTT
ACCAGTCAATACCCTCTTCCTGGTGATATGCCTACCTCAATACCTGACTT
CCTTGCTTTTCTCGCACATATCAACGTCCAAAAATTAGAGGCAATTGACT
ATTTTGAGGATGCAGCAAAGCCCAAAGAAAAACAAATTGCTGAGATAGCT
CAGTATTTCAACTCACCTCCAACAACTCGCTCGGCGTTGAACTTTCTTGA
TATGAAGAATGTTTTTCTTCCTTGTGTCCCCGTGCCTGTGCGCCAAGCAG
ATCTGCTAGGAACGGCATATTTACGCAAGCGAGGATCGGTGTCCAAGTCC
ATGCCAAATAATACAGCAATGCCCCCAGGGCGAGAGTTCCTTCTTCTATC
TGGCCGAAACTCGGTCTCCCCGATCCACGTTGATACTGCGGGCCAATTAA
CTTGGATTATCGGTATTTGCGGCCGCAAAGTCTGGTATGTACCTAGTGAT
CTCAACTTGGCTGCCCACCGACTTGCAACAGGAGGAAGTCAATTTCCAGA
GCACTATGAAGGAGGATGGATGCGCATTATTATTGAGCCTGGTGACCTTC
TTATTATGCCACCGGGCTGCCCACATGCCGTGTTCACCCCTGAAGACTCA
CTGACCGCTGGAGGTAACTTTTATACCAGTCCGCATCTTGGCACAACAAT
CACTACTACTGCTCTACAAGCCCGCTACGGGAGCATATTCTGCAACGAGA
AGCTATCTTTGCAGGACTATTCACATATTGCGCTGGTCCTTGAGCAGTGC
CAGGGATCTTTCTCGAATGCAGACCTGGCACGGTTGGCAGCAAGCGAACC
ACACTGGGATATTGCAGACCCCCTTAATGTTAAGGTGGAGGCTTTGTCCA
GGGATAATGCCGATAATTCTGCCACCTGCTCTGAAGGTGAAAGTCCTGTC
GAAGGTCGCGAGGATGACAGCAGGAAGCGAGCGAGAACTGTGAAGAAAGG
TGGTAAGGGTGGTAGTAGGAAACGAGGGAGAACCGTCAAGGAAAATGCCT
CGATCAACACCAAAGACCACATGTTATGGCTTCGGGTACTTCAATATATT
CGGCGGGCAGCCACCGAGCTTGAGGTGCGTCTGACAAAGGGTGACTCTTG
A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009519-T2.utr3p1 | KJC3_009519-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003347 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:620438..622646 + |
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