|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:636752..639295+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009525-T1 ID=KJC3_009525-T1|Name=KJC3_009525-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2544bp|location=Sequence derived from alignment at ch7:636752..639295+ (Aspergillus niger KJC3)
CCGTGGAGCAGTGTCCACCGGCCCGTCCGGGAGCCAACCCCTCTTTCTAA
ACACGACCACCAGAGCATCATTTGCGATCAATCATGGGCGTTTCTGAGAG
CAAAATAATCGCTGAAACTCTTTCCGGGGCCTGCTCTCAAGCTGAACGCA
CTGGAAGAGATCACATTGTAGATTATATTTCACAAAACACGGTTGTATGA
TGGCATCTCCTTCCACTGCACCGGTAACACAACTGACCACTTCTAGTTTG
TTAAATCACTACAGTCAACTTGGTCTCGCCTCCCCGGAGATATCAGGAAG
ATAATAAGCCAATATACAGACACAGATACAGATAGAGGATGCATTGCTAC
AAGGCGGAGATCAATAAGCCAAGATACGGATACGGATAGAAGACGCACTG
CTAAGAGTCGGATTACCAAGGTCATCAAAGACCGCGTAACATATCCAGAT
TTAATGTTCGACTCCTGCTGGAAAGACTATCCACTTCGATTCTTTGATAA
CAATGACTCTGTCTTTGAATCGGCACCTCTTGCTCATATATACAAACTCT
CAAAAGAATTTTCAAGGGAGAAAGACCCTATTCGCGCCCGTTTTCTCAAG
GTGATATTTTACCGTCTGAAAACAACTCTGACAAAGACTCGTGCAGAATC
CCTGAGACTATTGGCCAAAAATGTCCTTTCTTCAAACTCAGTGGGCGGGG
ACCTTGATGAAATCACAAGACAGATCAACCAATGGGGTTTAGAGGGGAAA
AGGATTGATTGTCTATGTCAAGATCTCGGAAACGATGGTATCAATATGAA
TCTTGGCGTTCTATTTTGTTTACCCAAGGAGCTCACCGATGAACAGTAAG
TATCTTAAATCTGGTACTTTCTTACTAAACTGATTGATTGCAGCATAAGA
TTGCTACCATATTCGGGATCTGACCGAGAAGAAGTGATTGAGCTTCTGGG
ACCTCGAGATGGCATGAAGACTCAAATGAGAAGTCATTGGAATGCATTCG
CACGAAACCTCTTCTCCACATTATGGGATGCAATTATCAAGTCTATATCT
AGAGAACCAGGTCTGTAAATAGCCATTCCCATAATTTGTCATTCTTTACT
TACTGTTTATGAATTTTCTTTCTTTTTCTCTCTCACCCCCTTTTTCCAAT
AAAAATCTTATTTTCTTCTCTTGTGGCGGGGAAGGGAGCGCTTGGGGTTT
CTTCCCTCAATCCAGTGCGCCTGCCCTTCTTTTTTGAGAATTCACTAATA
GATACTATAGTGGACGGAGCACCTTATATCCAACATGTCAACATTTCAAA
GGGTCGTACCGCATCATTGAACTCTCAACACAAGCATACCGATGCATCTG
GTAATAGTTCTTTATCTAGAATTTACCCAGGTCCAGGCGGCTCACGCCAT
GACGCAAATACGCCACTAGTACATTCTCTGAATGCCACACAACAACTGCA
ACATGCGTATATGTTTCCACAAGACGGAGCTGCGGCAAGTTTAATGAGGT
CGCTTGATCCGTATGAGCGTGCTGAACCACTGCAACCGTCATTTTCCATA
TCTTCCCAGGACATTGAGCAGATGGCTTGCGAGAATGTCCTTAACTTACA
TGAGAATTTACAGCGGCTTCAACCTCCATACACTATCTTTAACTTAAACG
AGCATTTACAGCCGCTGCAACATCCACACGATATCTTTGAATTGAACGAG
AATTTACAGCCGCTGCAATCTTCATATACTTCCACGGAAAGGCTCGCCGC
AGCGACACAGAATCCATCCAACCTGCATGAACAGGTTGGACCCCCTTTAT
ATCCATATGGCAACATATTGTCTACATAACCATAATAATGTATTGAAAGT
CAGAATTATACTTGATCTACCTTGATTTGCCTTATTTGTATTTAGCCTTC
AAAAGCCGCAACCATTATTTGCACACGTTATAGAGGAAGGATGAATATAG
CGGTTGCTTCAGCACTGACTATAAGATCAACTGTGATAGTATAGAATCCT
ACCCGCAATAACCCCCCAGGTGTCGTCGTAATATCTTCAGATAGTGGTAT
CAAGTATCCCTGCTTTCGAGGGTTTGAAAGTTTCGTGGGATTACGAAAAT
ACAGCAAGCGCCATCCCCAGTCCTGGCTTTTTTGTTAGTTATAGATCCAA
CCGTCAGTTTTTTGCAGAAAGGTACAGACAGGTCCCCCAATCTTCATTAT
CTCTGTCAACCGGGAGATCTTGTCGGTCAGCAACGCTCCCATATAGGTCT
TATTTCCATTGTCATCTTGCGAGATTGTTAACTGATTTCCTTCGTTGTGC
TGGCTTGACTCCGCATTCGCCTCAAATACAATTTGCCTGATCTGTTTGCG
AATGACTTCGGCGTCGGGAAGAAGTTCGTGGTGCTCCATATTGATGATAG
AGAGCCGGTGGACGATGAACCATAGAAGTATGAGAAGAAATATGTAGAAG
CAAGTCACTTCTATATAGTGGATTGTAGTAGAGATCCAGCTCTAAAGCAA
GAAGAAGGGGAACAAATGCACCAATATATATGACACAAGAAGAG back to topCoding sequence (CDS) from alignment at ch7:636752..639295+ >KJC3_009525-T1 ID=KJC3_009525-T1|Name=KJC3_009525-T1|organism=Aspergillus niger KJC3|type=CDS|length=5784bp|location=Sequence derived from alignment at ch7:636752..639295+ (Aspergillus niger KJC3)
ATGGGCGTTTCTGAGAGCAAAATAATCGCTGAAACTCTTTCCGGGGCCTG
CTCTCAAGCTGAACGCACTGGAAGAGATCACATTGTAGATTATATTTCAC
AAAACACGGTTTTTGTTAAATCACTACAGTCAACTTGGTCTCGCCTCCCC
GGAGATATCAGGAAGATAATAAGCCAATATACAGACACAGATACAGATAG
AGGATGCATTGCTACAAGGCGGAGATCAATAAGCCAAGATACGGATACGG
ATAGAAGACGCACTGCTAAGAGTCGGATTACCAAGGTCATCAAAGACCGC
GTAACATATCCAGATTTAATGTTCGACTCCTGCTGGAAAGACTATCCACT
TCGATTCTTTGATAACAATGACTCTGTCTTTGAATCGGCACCTCTTGCTC
ATATATACAAACTCTCAAAAGAATTTTCAAGGGAGAAAGACCCTATTCGC
GCCCGTTTTCTCAAGGTGATATTTTACCGTCTGAAAACAACTCTGACAAA
GACTCGTGCAGAATCCCTGAGACTATTGGCCAAAAATGTCCTTTCTTCAA
ACTCAGTGGGCGGGGACCTTGATGAAATCACAAGACAGATCAACCAATGG
GGTTTAGAGGGGAAAAGGATTGATTGTCTATGTCAAGATCTCGGAAACGA
TGGTATCAATATGAATCTTGGCGTTCTATTTTGTTTACCCAAGGAGCTCA
CCGATGAACACATAAGATTGCTACCATATTCGGGATCTGACCGAGAAGAA
GTGATTGAGCTTCTGGGACCTCGAGATGGCATGAAGACTCAAATGAGAAG
TCATTGGAATGCATTCGCACGAAACCTCTTCTCCACATTATGGGATGCAA
TTATCAAGTCTATATCTAGAGAACCAGTGGACGGAGCACCTTATATCCAA
CATGTCAACATTTCAAAGGGTCGTACCGCATCATTGAACTCTCAACACAA
GCATACCGATGCATCTGGTAATAGTTCTTTATCTAGAATTTACCCAGGTC
CAGGCGGCTCACGCCATGACGCAAATACGCCACTAGTACATTCTCTGAAT
GCCACACAACAACTGCAACATGCGTATATGTTTCCACAAGACGGAGCTGC
GGCAAGTTTAATGAGGTCGCTTGATCCGTATGAGCGTGCTGAACCACTGC
AACCGTCATTTTCCATATCTTCCCAGGACATTGAGCAGATGGCTTGCGAG
AATGTCCTTAACTTACATGAGAATTTACAGCGGCTTCAACCTCCATACAC
TATCTTTAACTTAAACGAGCATTTACAGCCGCTGCAACATCCACACGATA
TCTTTGAATTGAACGAGAATTTACAGCCGCTGCAATCTTCATATACTTCC
ACGGAAAGGCTCGCCGCAGCGACACAGAATCCATCCAACCTGCATGAACA
GGTTGGACCCCCTTTATATCCATATGGCAACATATTGTCTACATAAATGG
GCGTTTCTGAGAGCAAAATAATCGCTGAAACTCTTTCCGGGGCCTGCTCT
CAAGCTGAACGCACTGGAAGAGATCACATTGTAGATTATATTTCACAAAA
CACGGTTTTTGTTAAATCACTACAGTCAACTTGGTCTCGCCTCCCCGGAG
ATATCAGGAAGATAATAAGCCAATATACAGACACAGATACAGATAGAGGA
TGCATTGCTACAAGGCGGAGATCAATAAGCCAAGATACGGATACGGATAG
AAGACGCACTGCTAAGAGTCGGATTACCAAGGTCATCAAAGACCGCGTAA
CATATCCAGATTTAATGTTCGACTCCTGCTGGAAAGACTATCCACTTCGA
TTCTTTGATAACAATGACTCTGTCTTTGAATCGGCACCTCTTGCTCATAT
ATACAAACTCTCAAAAGAATTTTCAAGGGAGAAAGACCCTATTCGCGCCC
GTTTTCTCAAGGTGATATTTTACCGTCTGAAAACAACTCTGACAAAGACT
CGTGCAGAATCCCTGAGACTATTGGCCAAAAATGTCCTTTCTTCAAACTC
AGTGGGCGGGGACCTTGATGAAATCACAAGACAGATCAACCAATGGGGTT
TAGAGGGGAAAAGGATTGATTGTCTATGTCAAGATCTCGGAAACGATGGT
ATCAATATGAATCTTGGCGTTCTATTTTGTTTACCCAAGGAGCTCACCGA
TGAACACATAAGATTGCTACCATATTCGGGATCTGACCGAGAAGAAGTGA
TTGAGCTTCTGGGACCTCGAGATGGCATGAAGACTCAAATGAGAAGTCAT
TGGAATGCATTCGCACGAAACCTCTTCTCCACATTATGGGATGCAATTAT
CAAGTCTATATCTAGAGAACCAGTGGACGGAGCACCTTATATCCAACATG
TCAACATTTCAAAGGGTCGTACCGCATCATTGAACTCTCAACACAAGCAT
ACCGATGCATCTGGTAATAGTTCTTTATCTAGAATTTACCCAGGTCCAGG
CGGCTCACGCCATGACGCAAATACGCCACTAGTACATTCTCTGAATGCCA
CACAACAACTGCAACATGCGTATATGTTTCCACAAGACGGAGCTGCGGCA
AGTTTAATGAGGTCGCTTGATCCGTATGAGCGTGCTGAACCACTGCAACC
GTCATTTTCCATATCTTCCCAGGACATTGAGCAGATGGCTTGCGAGAATG
TCCTTAACTTACATGAGAATTTACAGCGGCTTCAACCTCCATACACTATC
TTTAACTTAAACGAGCATTTACAGCCGCTGCAACATCCACACGATATCTT
TGAATTGAACGAGAATTTACAGCCGCTGCAATCTTCATATACTTCCACGG
AAAGGCTCGCCGCAGCGACACAGAATCCATCCAACCTGCATGAACAGGTT
GGACCCCCTTTATATCCATATGGCAACATATTGTCTACATAAATGGGCGT
TTCTGAGAGCAAAATAATCGCTGAAACTCTTTCCGGGGCCTGCTCTCAAG
CTGAACGCACTGGAAGAGATCACATTGTAGATTATATTTCACAAAACACG
GTTTTTGTTAAATCACTACAGTCAACTTGGTCTCGCCTCCCCGGAGATAT
CAGGAAGATAATAAGCCAATATACAGACACAGATACAGATAGAGGATGCA
TTGCTACAAGGCGGAGATCAATAAGCCAAGATACGGATACGGATAGAAGA
CGCACTGCTAAGAGTCGGATTACCAAGGTCATCAAAGACCGCGTAACATA
TCCAGATTTAATGTTCGACTCCTGCTGGAAAGACTATCCACTTCGATTCT
TTGATAACAATGACTCTGTCTTTGAATCGGCACCTCTTGCTCATATATAC
AAACTCTCAAAAGAATTTTCAAGGGAGAAAGACCCTATTCGCGCCCGTTT
TCTCAAGGTGATATTTTACCGTCTGAAAACAACTCTGACAAAGACTCGTG
CAGAATCCCTGAGACTATTGGCCAAAAATGTCCTTTCTTCAAACTCAGTG
GGCGGGGACCTTGATGAAATCACAAGACAGATCAACCAATGGGGTTTAGA
GGGGAAAAGGATTGATTGTCTATGTCAAGATCTCGGAAACGATGGTATCA
ATATGAATCTTGGCGTTCTATTTTGTTTACCCAAGGAGCTCACCGATGAA
CACATAAGATTGCTACCATATTCGGGATCTGACCGAGAAGAAGTGATTGA
GCTTCTGGGACCTCGAGATGGCATGAAGACTCAAATGAGAAGTCATTGGA
ATGCATTCGCACGAAACCTCTTCTCCACATTATGGGATGCAATTATCAAG
TCTATATCTAGAGAACCAGTGGACGGAGCACCTTATATCCAACATGTCAA
CATTTCAAAGGGTCGTACCGCATCATTGAACTCTCAACACAAGCATACCG
ATGCATCTGGTAATAGTTCTTTATCTAGAATTTACCCAGGTCCAGGCGGC
TCACGCCATGACGCAAATACGCCACTAGTACATTCTCTGAATGCCACACA
ACAACTGCAACATGCGTATATGTTTCCACAAGACGGAGCTGCGGCAAGTT
TAATGAGGTCGCTTGATCCGTATGAGCGTGCTGAACCACTGCAACCGTCA
TTTTCCATATCTTCCCAGGACATTGAGCAGATGGCTTGCGAGAATGTCCT
TAACTTACATGAGAATTTACAGCGGCTTCAACCTCCATACACTATCTTTA
ACTTAAACGAGCATTTACAGCCGCTGCAACATCCACACGATATCTTTGAA
TTGAACGAGAATTTACAGCCGCTGCAATCTTCATATACTTCCACGGAAAG
GCTCGCCGCAGCGACACAGAATCCATCCAACCTGCATGAACAGGTTGGAC
CCCCTTTATATCCATATGGCAACATATTGTCTACATAAATGGGCGTTTCT
GAGAGCAAAATAATCGCTGAAACTCTTTCCGGGGCCTGCTCTCAAGCTGA
ACGCACTGGAAGAGATCACATTGTAGATTATATTTCACAAAACACGGTTT
TTGTTAAATCACTACAGTCAACTTGGTCTCGCCTCCCCGGAGATATCAGG
AAGATAATAAGCCAATATACAGACACAGATACAGATAGAGGATGCATTGC
TACAAGGCGGAGATCAATAAGCCAAGATACGGATACGGATAGAAGACGCA
CTGCTAAGAGTCGGATTACCAAGGTCATCAAAGACCGCGTAACATATCCA
GATTTAATGTTCGACTCCTGCTGGAAAGACTATCCACTTCGATTCTTTGA
TAACAATGACTCTGTCTTTGAATCGGCACCTCTTGCTCATATATACAAAC
TCTCAAAAGAATTTTCAAGGGAGAAAGACCCTATTCGCGCCCGTTTTCTC
AAGGTGATATTTTACCGTCTGAAAACAACTCTGACAAAGACTCGTGCAGA
ATCCCTGAGACTATTGGCCAAAAATGTCCTTTCTTCAAACTCAGTGGGCG
GGGACCTTGATGAAATCACAAGACAGATCAACCAATGGGGTTTAGAGGGG
AAAAGGATTGATTGTCTATGTCAAGATCTCGGAAACGATGGTATCAATAT
GAATCTTGGCGTTCTATTTTGTTTACCCAAGGAGCTCACCGATGAACACA
TAAGATTGCTACCATATTCGGGATCTGACCGAGAAGAAGTGATTGAGCTT
CTGGGACCTCGAGATGGCATGAAGACTCAAATGAGAAGTCATTGGAATGC
ATTCGCACGAAACCTCTTCTCCACATTATGGGATGCAATTATCAAGTCTA
TATCTAGAGAACCAGTGGACGGAGCACCTTATATCCAACATGTCAACATT
TCAAAGGGTCGTACCGCATCATTGAACTCTCAACACAAGCATACCGATGC
ATCTGGTAATAGTTCTTTATCTAGAATTTACCCAGGTCCAGGCGGCTCAC
GCCATGACGCAAATACGCCACTAGTACATTCTCTGAATGCCACACAACAA
CTGCAACATGCGTATATGTTTCCACAAGACGGAGCTGCGGCAAGTTTAAT
GAGGTCGCTTGATCCGTATGAGCGTGCTGAACCACTGCAACCGTCATTTT
CCATATCTTCCCAGGACATTGAGCAGATGGCTTGCGAGAATGTCCTTAAC
TTACATGAGAATTTACAGCGGCTTCAACCTCCATACACTATCTTTAACTT
AAACGAGCATTTACAGCCGCTGCAACATCCACACGATATCTTTGAATTGA
ACGAGAATTTACAGCCGCTGCAATCTTCATATACTTCCACGGAAAGGCTC
GCCGCAGCGACACAGAATCCATCCAACCTGCATGAACAGGTTGGACCCCC
TTTATATCCATATGGCAACATATTGTCTACATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009525-T1.utr5p1 | KJC3_009525-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009525-T1.utr3p1 | KJC3_009525-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:636752..639295 + |
|
