You are here

Home

KJC3_009528-T1, KJC3_009528-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009528-T1
Unique NameKJC3_009528-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:660790..661880-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009528-T1 ID=KJC3_009528-T1|Name=KJC3_009528-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1091bp|location=Sequence derived from alignment at ch7:660790..661880- (Aspergillus niger KJC3)
CTGTATACTTCGGGTAGCTCTTGTGTAAGGGTCCTGGCTCCACCCCTTTA
GCGCTATACAAGTGCTTATGGCCCGCGGCATGATTAGATGGGTCAAAACT
GTTTCTAATCTTTTTTTCACAGGATGAGGCAGCTTTCATTTTCCCTGACC
ATATAGTCTATCAGGAACCCCTGAGTATCAGCACAGAAGGTCCAGGTGTC
CCTAATCCCGCATAACTCATAATGTATTCATTTAACACCTTCCCTCTCGG
TCTCAGTGAGCAAGAAATGAATGACCTGTCCGACAACTATCACCAACCAA
ATGAAACCGGGCTACCAATGCAGGACAACTCGGTTTTTTCAGCCGCCTTA
CAGGGAATTTCTCGGTTGGAACATGATGAAACCCGCATTCACTCAGAATC
TGCCTATCAGGCACCTGGGTCAGCGACAGCGTAAGGCCATCGAACGGCAT
TTTATGATGGTATCTGACCAGCACGGCAGCCTAGAAGCAGTCACCATGCA
ATCTCACGGTACACCAAGGTGAGGCACCCACTGCTGTAAATTTCGGTAGT
ACTGACAGGGTAACAGCAATGACCTGGTCTTGCAGAAGTTATCTGAGATG
GAGTCTGCGGTAACCAAACTGAACGAAAAGGTCACTAGAGGGGCTGATGA
GGGAGACAAGGGCCCGAACCCTTCAGATAAAAGGAGAATTAGAAAGCTGG
AGAACGCAGCTAACGAGACAATTGAGGAGCGGGTTGACAGACTGAGTCAG
AGAGTCGATGATTTGACATTAAAATTCGATGGCTTTGCTGTTATGGTGGA
TCATGTTTCCCGGCTTTCGACCCGAGTTGATTTTATCAACAGATATCTGA
ATGAGTACTCAACCCTGCTGCAGAAGGAGACGGAGAGGACAACTGCCATG
ACTTCTGGGTTAGATGACGCCTGTCGGAGATTTCATCATCTACTTTCTAG
TATATCAAGGCCACTCGACCCGGGGGAACTGATGGGTTTCTACGAAGACT
AGCACGTAGCATTGAGTCTATATTGGAGGGGCATAGTCTAGTGTTACTTA
CTTTGACGAAAGTGTTGAACAGATTTTAAAAGATATATACC
back to top

Coding sequence (CDS) from alignment at ch7:660790..661880-

>KJC3_009528-T1 ID=KJC3_009528-T1|Name=KJC3_009528-T1|organism=Aspergillus niger KJC3|type=CDS|length=2052bp|location=Sequence derived from alignment at ch7:660790..661880- (Aspergillus niger KJC3)
CAATGACCTGGTCTTGCAGAAGTTATCTGAGATGGAGTCTGCGGTAACCA
AACTGAACGAAAAGGTCACTAGAGGGGCTGATGAGGGAGACAAGGGCCCG
AACCCTTCAGATAAAAGGAGAATTAGAAAGCTGGAGAACGCAGCTAACGA
GACAATTGAGGAGCGGGTTGACAGACTGAGTCAGAGAGTCGATGATTTGA
CATTAAAATTCGATGGCTTTGCTGTTATGGTGGATCATGTTTCCCGGCTT
TCGACCCGAGTTGATTTTATCAACAGATATCTGAATGAGTACTCAACCCT
GCTGCAGAAGGAGACGGAGAGGACAACTGCCATGACTTCTGGGTTAGATG
ACGCCTGTCGGAGATTTCATCATCTACTTTCTAGTATATCAAGGCCACTC
GACCCGGGGGAACTGATGGGTTTCTACGAAGACTAGCCTAGAAGCAGTCA
CCATGCAATCTCACGGTACACCAAGATGTATTCATTTAACACCTTCCCTC
TCGGTCTCAGTGAGCAAGAAATGAATGACCTGTCCGACAACTATCACCAA
CCAAATGAAACCGGGCTACCAATGCAGGACAACTCGGTTTTTTCAGCCGC
CTTACAGGGAATTTCTCGGTTGGAACATGATGAAACCCGCATTCACTCAG
AATCTGCCTATCAGGCACCTGGGTCAGCGACAGCCAATGACCTGGTCTTG
CAGAAGTTATCTGAGATGGAGTCTGCGGTAACCAAACTGAACGAAAAGGT
CACTAGAGGGGCTGATGAGGGAGACAAGGGCCCGAACCCTTCAGATAAAA
GGAGAATTAGAAAGCTGGAGAACGCAGCTAACGAGACAATTGAGGAGCGG
GTTGACAGACTGAGTCAGAGAGTCGATGATTTGACATTAAAATTCGATGG
CTTTGCTGTTATGGTGGATCATGTTTCCCGGCTTTCGACCCGAGTTGATT
TTATCAACAGATATCTGAATGAGTACTCAACCCTGCTGCAGAAGGAGACG
GAGAGGACAACTGCCATGACTTCTGGGTTAGATGACGCCTGTCGGAGATT
TCATCATCTACTTTCTAGTATATCAAGGCCACTCGACCCGGGGGAACTGA
TGGGTTTCTACGAAGACTAGCCTAGAAGCAGTCACCATGCAATCTCACGG
TACACCAAGATGTATTCATTTAACACCTTCCCTCTCGGTCTCAGTGAGCA
AGAAATGAATGACCTGTCCGACAACTATCACCAACCAAATGAAACCGGGC
TACCAATGCAGGACAACTCGGTTTTTTCAGCCGCCTTACAGGGAATTTCT
CGGTTGGAACATGATGAAACCCGCATTCACTCAGAATCTGCCTATCAGGC
ACCTGGGTCAGCGACAGCCAATGACCTGGTCTTGCAGAAGTTATCTGAGA
TGGAGTCTGCGGTAACCAAACTGAACGAAAAGGTCACTAGAGGGGCTGAT
GAGGGAGACAAGGGCCCGAACCCTTCAGATAAAAGGAGAATTAGAAAGCT
GGAGAACGCAGCTAACGAGACAATTGAGGAGCGGGTTGACAGACTGAGTC
AGAGAGTCGATGATTTGACATTAAAATTCGATGGCTTTGCTGTTATGGTG
GATCATGTTTCCCGGCTTTCGACCCGAGTTGATTTTATCAACAGATATCT
GAATGAGTACTCAACCCTGCTGCAGAAGGAGACGGAGAGGACAACTGCCA
TGACTTCTGGGTTAGATGACGCCTGTCGGAGATTTCATCATCTACTTTCT
AGTATATCAAGGCCACTCGACCCGGGGGAACTGATGGGTTTCTACGAAGA
CTAGCCTAGAAGCAGTCACCATGCAATCTCACGGTACACCAAGATGTATT
CATTTAACACCTTCCCTCTCGGTCTCAGTGAGCAAGAAATGAATGACCTG
TCCGACAACTATCACCAACCAAATGAAACCGGGCTACCAATGCAGGACAA
CTCGGTTTTTTCAGCCGCCTTACAGGGAATTTCTCGGTTGGAACATGATG
AAACCCGCATTCACTCAGAATCTGCCTATCAGGCACCTGGGTCAGCGACA
GC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009528KJC3_009528Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009528-T1KJC3_009528-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009528-T1.cdsKJC3_009528-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009528-T1.utr3p1KJC3_009528-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009528-T1.exon4KJC3_009528-T1.exon4Aspergillus niger KJC3exon
KJC3_009528-T1.exon3KJC3_009528-T1.exon3Aspergillus niger KJC3exon
KJC3_009528-T1.exon2KJC3_009528-T1.exon2Aspergillus niger KJC3exon
KJC3_009528-T1.exon1KJC3_009528-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009528-T1.utr5p2KJC3_009528-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009528-T1.utr5p1KJC3_009528-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:660790..661880 -
Powered by Drupal