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KJC3_009538-T1, KJC3_009538-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009538-T1
Unique NameKJC3_009538-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:701135..702114-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009538-T1 ID=KJC3_009538-T1|Name=KJC3_009538-T1|organism=Aspergillus niger KJC3|type=mRNA|length=980bp|location=Sequence derived from alignment at ch7:701135..702114- (Aspergillus niger KJC3)
AAATAATTCGAATGGTGTTCGTTCTTCAGAATGACACACCTGGAAGCACC
ATTTATTAATGTCACACTCGTTCCGAAAGAGAAGGTCGCATTGACAGAGT
CACAACAGCGAATTACTCGCTCACATGCCGCTCGCTCGGCGCATGCCCGT
GTCCGACATCGGCGGATGATAGAGTATCAGGCACAGAAGCGGGGGAGAAG
AGACATACGAGAAACTGTTATGGGTAGTTATCCGGGCCTCCCAGGAAGAG
CACTGTCTGGGGTTTCCACATTACTTTCGGCAGACAGGCGGGACCCTTTT
CTTAGCTTTGCCAGGGGTTTAAACCCGATAGAACAGTTCTTGTTTGATCA
TTGTATGGCCTCTCAGTTGAAGCATCCTGATTAACTTTACTGACTATCGT
CAAAGATATCAACGTCGTCATCCCTCTCATGCGCTGCAATGAGAGCGCAA
TATTCTTCGCGCAGCGCATGATCAGACTTTGGGTTCCCACTGCGATCACA
GAATCAAGCCTTCTCGATATCATCCTGCTTGCCGCATGTCGTCACTTATC
TATTGCATATAGACAGAGGTCGCAGGAACAGCAGCGTATCTTCCAACAAC
TGACTTTTCAGTACAAGTCCCAGAGTCTGCAAGCACTAAGGCATGCCATC
TCGGCTGAGATGCCGATGCTGACTGATTCAACGGTCGCGAAAGCTATAAT
GCTTGCCTATGATGAAGTAAGAGTTCACCTTCGGATGTTTCCGGTGATGG
CGCTAACAAGGAATAGTTATATGTTCGAGATGCAAAAATGCTCAAGCACC
ACGTAGACGCAGCCGTGGAAATGGTCACGCTGAAAGGTGGGCCCCAGACA
CTAGGTCTTGATGGACTCATGGAGCATTTCCTTCTAAATTTGATTACCAA
GACGAGAGGCGACCTGGAACTTTCGGTCAGGACACCCTGGGAGGAATAGA
AATGTTAGGGCTCGTTGTATTGATTACTGG
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Coding sequence (CDS) from alignment at ch7:701135..702114-

>KJC3_009538-T1 ID=KJC3_009538-T1|Name=KJC3_009538-T1|organism=Aspergillus niger KJC3|type=CDS|length=2448bp|location=Sequence derived from alignment at ch7:701135..702114- (Aspergillus niger KJC3)
TTATATGTTCGAGATGCAAAAATGCTCAAGCACCACGTAGACGCAGCCGT
GGAAATGGTCACGCTGAAAGGTGGGCCCCAGACACTAGGTCTTGATGGAC
TCATGGAGCATTTCCTTCTAAATTTGATTACCAAGACGAGAGGCGACCTG
GAACTTTCGGTCAGGACACCCTGGGAGGAATAGATATCAACGTCGTCATC
CCTCTCATGCGCTGCAATGAGAGCGCAATATTCTTCGCGCAGCGCATGAT
CAGACTTTGGGTTCCCACTGCGATCACAGAATCAAGCCTTCTCGATATCA
TCCTGCTTGCCGCATGTCGTCACTTATCTATTGCATATAGACAGAGGTCG
CAGGAACAGCAGCGTATCTTCCAACAACTGACTTTTCAGTACAAGTCCCA
GAGTCTGCAAGCACTAAGGCATGCCATCTCGGCTGAGATGCCGATGCTGA
CTGATTCAACGGTCGCGAAAGCTATAATGCTTGCCTATGATGAAATGACA
CACCTGGAAGCACCATTTATTAATGTCACACTCGTTCCGAAAGAGAAGGT
CGCATTGACAGAGTCACAACAGCGAATTACTCGCTCACATGCCGCTCGCT
CGGCGCATGCCCGTGTCCGACATCGGCGGATGATAGAGTATCAGGCACAG
AAGCGGGGGAGAAGAGACATACGAGAAACTGTTATGGGTAGTTATCCGGG
CCTCCCAGGAAGAGCACTGTCTGGGGTTTCCACATTACTTTCGGCAGACA
GGCGGGACCCTTTTCTTAGCTTTGCCAGGGGTTTAAACCCGATAGAACAG
TTCTTGTTTGATCATTTTATATGTTCGAGATGCAAAAATGCTCAAGCACC
ACGTAGACGCAGCCGTGGAAATGGTCACGCTGAAAGGTGGGCCCCAGACA
CTAGGTCTTGATGGACTCATGGAGCATTTCCTTCTAAATTTGATTACCAA
GACGAGAGGCGACCTGGAACTTTCGGTCAGGACACCCTGGGAGGAATAGA
TATCAACGTCGTCATCCCTCTCATGCGCTGCAATGAGAGCGCAATATTCT
TCGCGCAGCGCATGATCAGACTTTGGGTTCCCACTGCGATCACAGAATCA
AGCCTTCTCGATATCATCCTGCTTGCCGCATGTCGTCACTTATCTATTGC
ATATAGACAGAGGTCGCAGGAACAGCAGCGTATCTTCCAACAACTGACTT
TTCAGTACAAGTCCCAGAGTCTGCAAGCACTAAGGCATGCCATCTCGGCT
GAGATGCCGATGCTGACTGATTCAACGGTCGCGAAAGCTATAATGCTTGC
CTATGATGAAATGACACACCTGGAAGCACCATTTATTAATGTCACACTCG
TTCCGAAAGAGAAGGTCGCATTGACAGAGTCACAACAGCGAATTACTCGC
TCACATGCCGCTCGCTCGGCGCATGCCCGTGTCCGACATCGGCGGATGAT
AGAGTATCAGGCACAGAAGCGGGGGAGAAGAGACATACGAGAAACTGTTA
TGGGTAGTTATCCGGGCCTCCCAGGAAGAGCACTGTCTGGGGTTTCCACA
TTACTTTCGGCAGACAGGCGGGACCCTTTTCTTAGCTTTGCCAGGGGTTT
AAACCCGATAGAACAGTTCTTGTTTGATCATTTTATATGTTCGAGATGCA
AAAATGCTCAAGCACCACGTAGACGCAGCCGTGGAAATGGTCACGCTGAA
AGGTGGGCCCCAGACACTAGGTCTTGATGGACTCATGGAGCATTTCCTTC
TAAATTTGATTACCAAGACGAGAGGCGACCTGGAACTTTCGGTCAGGACA
CCCTGGGAGGAATAGATATCAACGTCGTCATCCCTCTCATGCGCTGCAAT
GAGAGCGCAATATTCTTCGCGCAGCGCATGATCAGACTTTGGGTTCCCAC
TGCGATCACAGAATCAAGCCTTCTCGATATCATCCTGCTTGCCGCATGTC
GTCACTTATCTATTGCATATAGACAGAGGTCGCAGGAACAGCAGCGTATC
TTCCAACAACTGACTTTTCAGTACAAGTCCCAGAGTCTGCAAGCACTAAG
GCATGCCATCTCGGCTGAGATGCCGATGCTGACTGATTCAACGGTCGCGA
AAGCTATAATGCTTGCCTATGATGAAATGACACACCTGGAAGCACCATTT
ATTAATGTCACACTCGTTCCGAAAGAGAAGGTCGCATTGACAGAGTCACA
ACAGCGAATTACTCGCTCACATGCCGCTCGCTCGGCGCATGCCCGTGTCC
GACATCGGCGGATGATAGAGTATCAGGCACAGAAGCGGGGGAGAAGAGAC
ATACGAGAAACTGTTATGGGTAGTTATCCGGGCCTCCCAGGAAGAGCACT
GTCTGGGGTTTCCACATTACTTTCGGCAGACAGGCGGGACCCTTTTCTTA
GCTTTGCCAGGGGTTTAAACCCGATAGAACAGTTCTTGTTTGATCATT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009538KJC3_009538Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009538-T1KJC3_009538-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009538-T1.cdsKJC3_009538-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009538-T1.utr3p1KJC3_009538-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009538-T1.exon3KJC3_009538-T1.exon3Aspergillus niger KJC3exon
KJC3_009538-T1.exon2KJC3_009538-T1.exon2Aspergillus niger KJC3exon
KJC3_009538-T1.exon1KJC3_009538-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009538-T1.utr5p1KJC3_009538-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021858
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:701135..702114 -
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