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KJC3_009546-T1, KJC3_009546-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009546-T1
Unique NameKJC3_009546-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:727829..731634+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009546-T1 ID=KJC3_009546-T1|Name=KJC3_009546-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3806bp|location=Sequence derived from alignment at ch7:727829..731634+ (Aspergillus niger KJC3)
TTTACTAATACGACCCAACCGCCCTTCCGCGAAAGAACCCCAACCTGCGT GGTCCAACATTGTAGCTTAGCGTGTCGTCAGCAATATGGCCATGAATAAA CCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTGCGCAAGTCACATGA GAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGTTACGCAAGAAGGTAC TACACGAAGCATATGCTGTGCTTCCATCCTATACGCTTCAGACCAATCAT TCTGATTATATCGCCAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGC ACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGA ATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTG GATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCT ATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGA GGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGA CCGAACTCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAACGATC CCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCT TGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAG CATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGAC ACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCA TCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAAT CCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCG GCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGG ACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGT TCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTT AACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCA TGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAA CGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTT GGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTC TGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAA CCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCA AGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACAC CTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACA TGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATT ATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATC GGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTAC CGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATC CTGGCTATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGA TGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCA TCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGC GAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCC CGATTCCTGGCATTAATAAGCGCGTGATTGTTATATCATAAAGTGGTCTG GACATAGTTCTAAGCATCGTACAACATTATAACTGACCGGCCATCGAATA TTTGGTAACAGCTGTCATGAATACCTGACACAGCTCACGCAATGCAGTAC AGGAATCTGAACAGTCAGCTCAAGACAAGCATATCATGATTCCTACTCCC AGTCCACAAATCGAACCCTAGTTAGCCACGCGCCATCTGGTCCGTTAGGC TTCGAAAGCAGGATAACTTGGCGAGTACTTCGAAGGTTTTCTGCCTGCGT ACACGAAATGACTGTCTCATATATACGGTCCCTGTCGACCGGAACTCTTT CTTGTACGTCCAGCGATGACATATTGGCTTCTTCCAGTTCCATCACCAAT TGAGCAATCTTAACTATAATATGTTTATTCCATAGACCCTCTTGTTTGGT ACATCTGTTCATCTGCCGGATAGCCTCCCGACGGATGATCGGATCCCGGC ACCTAATTGCTGTATAGTACAGCCCTGTAACAATACGTGTTTCGAGAGTG AAGATATCCGGTGCGCAATTCGTTGACTTGCGGTCGGTGGCATCGTCAAG ATCAATGACTTGACCGGCACAGTGGACGAGCTCCGCGAAAGCAGAATTAT AGTTGTCGAAGACCGTTTCCTGTCTGGCCAGACATGTTTCCGTCCATATC CAAGAGACAAGATACAACGAACGCAAGAAGAACAGACCTCGCCGGTCGCC TTTTCGGGAGTTTTCTGCTTCATTTGCATAGTTTTCCAAGGCACTTCTCC ATGTTTGAAATTCCTTCCTGAGCTCCGACTGTTGGGGCATCAAGTGTGTG CGATCTGTGCGTTCGTGCCCTGCAGAACGGATGAACATGAGTGTCTTGTT CATGAGCTTATAGAGTGCGTGTTGAGCCCAGTAAATATCCGACCAAACGG GCCTTCCATCTGAGCGTTTCACTTCGGGATATGTTGGCTTAATATCAAGG GCAACCATTGGCCGTCCGTTCATTGCGAGCTGGATGTTCAGTCGAAGACT TAATTTCCATAACTCATGATAAGTCGCATTTAGTTTACTTCCTAGAGGTT GCAGTCTTCCTATGACGCTCTGAACTATCTTCAGGCCCGCTTCGAGGTGG TCCAGGGATTGCTTGTGATTACCATTCAGCATCTCCAAGCACACAAAAAG AAAACATGTGATGACCAGAAGATCGATTCTAGGGTTTTGCGAAACAAGAT AGGTTCTCAAATGTCGAATGGCCTCATTATAATGAAATATAATGAAGCGA TCATTAGCGGCTCGGCGGTCCGCAGTGGATGATGGATTTCGCTGTAGCAC AAGCGCCCGCTCATGGGCCGCGCTTACTGCCGCCGTGGCATGCCTGACGA CAGGTTCACACTCGCTCAGTTGGGGGAGGTGGCGCATCCAGAGATCAGAC TCAAATACCCCGGATAGCGCCCGAGCCGTCTGTGAGCTGAAGAAGTACAA ATAATGTCGCTCCTTTTGTGTTCCTGGTCGAAGGACCATGCGATGGTCGA CGGTCATCATTGGCTTACTGGGGACGACAGGCTGGTGGTTGTTCCCTGGA CGTGATTCACTGTATCCATCGCACTTTCTCCCCGTGCGCTTGCACTGATA GCATTCGGGCTTTTGTTCATCGCACTTGACATGTCGAATTCTGCATGATG AGCTGGTTAGCCGGAAGATGCTTTTTAGGCGCCCAATGCTCCGGCTTGTA CCTGCAAGTGGAACACCCTGTCCTCGATCTTGGTCCCGATGCTCTTCTTC GCTTGGTCATCATCAATACAAGGTTTCCATAGGCGTATCATATGCCAAGC CAGATGTAGATCTGAGAACAAGGAAAGCTTATTAGGTGGAAAGCGATCCA AGCAACCCATGGCTCGCAGCCTCACCAGTCGCTTATCAGCCTGAGTGTCA TCACCC
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Coding sequence (CDS) from alignment at ch7:727829..731634+

>KJC3_009546-T1 ID=KJC3_009546-T1|Name=KJC3_009546-T1|organism=Aspergillus niger KJC3|type=CDS|length=3420bp|location=Sequence derived from alignment at ch7:727829..731634+ (Aspergillus niger KJC3)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGA
CTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGA
CACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCG
AACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACT
CCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGA
TATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGACCGAAC
TCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAACGATCCCATTC
GATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTT
CAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCA
AATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGG
ACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGC
GGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACG
ATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGC
CACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGGACAGAG
GCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACAC
GCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCT
ACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAAC
AACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGA
GCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAAT
CTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTT
ATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAA
ATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGTT
AAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACCTCGAT
GTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCA
GTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATTATGTCT
TTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATCGGTATT
GGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTACCGGCTT
CATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCT
ATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGT
GTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTT
TGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATG
TGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTC
CTGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCG
GATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGA
TGCAAGCAGTTACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACG
TTGCACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAATACCA
GCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTC
GCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGG
TCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATG
GCGAGGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAAC
GCGACCGAACTCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAAC
GATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTA
ATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCA
GCAGCATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCT
CGACACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAAC
GCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACC
GAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGC
ATCGGCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAAT
ATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATT
TCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATAT
TGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGT
CCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCG
AAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGC
TCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTT
CCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTG
GAAACCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGG
GGCAAGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGC
ACACCTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGA
TACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTAT
CATTATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGC
GATCGGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACA
CTACCGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACA
TATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTAT
TGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAA
GTCATCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAG
TAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCA
CGCCCGATTCCTGGCATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009546KJC3_009546Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.utr5p1KJC3_009546-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.exon1KJC3_009546-T1.exon1Aspergillus niger KJC3exon
KJC3_009546-T1.exon2KJC3_009546-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.cdsKJC3_009546-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.utr3p1KJC3_009546-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1KJC3_009546-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:727829..731634 +