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KJC3_009546-T1, KJC3_009546-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009546-T1
Unique NameKJC3_009546-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:727829..731634+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009546-T1 ID=KJC3_009546-T1|Name=KJC3_009546-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3806bp|location=Sequence derived from alignment at ch7:727829..731634+ (Aspergillus niger KJC3)
TTTACTAATACGACCCAACCGCCCTTCCGCGAAAGAACCCCAACCTGCGT
GGTCCAACATTGTAGCTTAGCGTGTCGTCAGCAATATGGCCATGAATAAA
CCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTGCGCAAGTCACATGA
GAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGTTACGCAAGAAGGTAC
TACACGAAGCATATGCTGTGCTTCCATCCTATACGCTTCAGACCAATCAT
TCTGATTATATCGCCAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGC
ACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGA
ATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTG
GATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCT
ATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGA
GGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGA
CCGAACTCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAACGATC
CCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCT
TGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAG
CATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGAC
ACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCA
TCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAAT
CCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCG
GCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGG
ACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGT
TCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTT
AACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCA
TGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAA
CGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTT
GGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTC
TGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAA
CCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCA
AGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACAC
CTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACA
TGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATT
ATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATC
GGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTAC
CGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATC
CTGGCTATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGA
TGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCA
TCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGC
GAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCC
CGATTCCTGGCATTAATAAGCGCGTGATTGTTATATCATAAAGTGGTCTG
GACATAGTTCTAAGCATCGTACAACATTATAACTGACCGGCCATCGAATA
TTTGGTAACAGCTGTCATGAATACCTGACACAGCTCACGCAATGCAGTAC
AGGAATCTGAACAGTCAGCTCAAGACAAGCATATCATGATTCCTACTCCC
AGTCCACAAATCGAACCCTAGTTAGCCACGCGCCATCTGGTCCGTTAGGC
TTCGAAAGCAGGATAACTTGGCGAGTACTTCGAAGGTTTTCTGCCTGCGT
ACACGAAATGACTGTCTCATATATACGGTCCCTGTCGACCGGAACTCTTT
CTTGTACGTCCAGCGATGACATATTGGCTTCTTCCAGTTCCATCACCAAT
TGAGCAATCTTAACTATAATATGTTTATTCCATAGACCCTCTTGTTTGGT
ACATCTGTTCATCTGCCGGATAGCCTCCCGACGGATGATCGGATCCCGGC
ACCTAATTGCTGTATAGTACAGCCCTGTAACAATACGTGTTTCGAGAGTG
AAGATATCCGGTGCGCAATTCGTTGACTTGCGGTCGGTGGCATCGTCAAG
ATCAATGACTTGACCGGCACAGTGGACGAGCTCCGCGAAAGCAGAATTAT
AGTTGTCGAAGACCGTTTCCTGTCTGGCCAGACATGTTTCCGTCCATATC
CAAGAGACAAGATACAACGAACGCAAGAAGAACAGACCTCGCCGGTCGCC
TTTTCGGGAGTTTTCTGCTTCATTTGCATAGTTTTCCAAGGCACTTCTCC
ATGTTTGAAATTCCTTCCTGAGCTCCGACTGTTGGGGCATCAAGTGTGTG
CGATCTGTGCGTTCGTGCCCTGCAGAACGGATGAACATGAGTGTCTTGTT
CATGAGCTTATAGAGTGCGTGTTGAGCCCAGTAAATATCCGACCAAACGG
GCCTTCCATCTGAGCGTTTCACTTCGGGATATGTTGGCTTAATATCAAGG
GCAACCATTGGCCGTCCGTTCATTGCGAGCTGGATGTTCAGTCGAAGACT
TAATTTCCATAACTCATGATAAGTCGCATTTAGTTTACTTCCTAGAGGTT
GCAGTCTTCCTATGACGCTCTGAACTATCTTCAGGCCCGCTTCGAGGTGG
TCCAGGGATTGCTTGTGATTACCATTCAGCATCTCCAAGCACACAAAAAG
AAAACATGTGATGACCAGAAGATCGATTCTAGGGTTTTGCGAAACAAGAT
AGGTTCTCAAATGTCGAATGGCCTCATTATAATGAAATATAATGAAGCGA
TCATTAGCGGCTCGGCGGTCCGCAGTGGATGATGGATTTCGCTGTAGCAC
AAGCGCCCGCTCATGGGCCGCGCTTACTGCCGCCGTGGCATGCCTGACGA
CAGGTTCACACTCGCTCAGTTGGGGGAGGTGGCGCATCCAGAGATCAGAC
TCAAATACCCCGGATAGCGCCCGAGCCGTCTGTGAGCTGAAGAAGTACAA
ATAATGTCGCTCCTTTTGTGTTCCTGGTCGAAGGACCATGCGATGGTCGA
CGGTCATCATTGGCTTACTGGGGACGACAGGCTGGTGGTTGTTCCCTGGA
CGTGATTCACTGTATCCATCGCACTTTCTCCCCGTGCGCTTGCACTGATA
GCATTCGGGCTTTTGTTCATCGCACTTGACATGTCGAATTCTGCATGATG
AGCTGGTTAGCCGGAAGATGCTTTTTAGGCGCCCAATGCTCCGGCTTGTA
CCTGCAAGTGGAACACCCTGTCCTCGATCTTGGTCCCGATGCTCTTCTTC
GCTTGGTCATCATCAATACAAGGTTTCCATAGGCGTATCATATGCCAAGC
CAGATGTAGATCTGAGAACAAGGAAAGCTTATTAGGTGGAAAGCGATCCA
AGCAACCCATGGCTCGCAGCCTCACCAGTCGCTTATCAGCCTGAGTGTCA
TCACCC
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Coding sequence (CDS) from alignment at ch7:727829..731634+

>KJC3_009546-T1 ID=KJC3_009546-T1|Name=KJC3_009546-T1|organism=Aspergillus niger KJC3|type=CDS|length=3420bp|location=Sequence derived from alignment at ch7:727829..731634+ (Aspergillus niger KJC3)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGA
CTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGA
CACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCG
AACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACT
CCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGA
TATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAACGCGACCGAAC
TCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAACGATCCCATTC
GATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTT
CAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCA
AATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGG
ACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGC
GGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACCGAATCCTACG
ATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGC
CACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAATATGGACAGAG
GCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACAC
GCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCT
ACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAAC
AACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGA
GCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAAT
CTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTT
ATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAA
ATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGGGGCAAGTGTT
AAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGCACACCTCGAT
GTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGATACATGATCA
GTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTATCATTATGTCT
TTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGCGATCGGTATT
GGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACACTACCGGCTT
CATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACATATCCTGGCT
ATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTATTGGATGGGGT
GTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAAGTCATCTCTT
TGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAGTAGCGAAATG
TGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCACGCCCGATTC
CTGGCATTAAATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCG
GATATAGGCTGCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGA
TGCAAGCAGTTACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACG
TTGCACCAGACTCTCGTACACATGTCAATATCAACACCGTCCGAATACCA
GCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTC
GCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGG
TCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATG
GCGAGGAAGATATACCCGGCTTAGACCTACCCTCCCCGGATCCTCTCAAC
GCGACCGAACTCAATCTCCTAGCTCATTATCTCTCGCACACTAGCCAAAC
GATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTA
ATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCA
GCAGCATGCAAATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCT
CGACACACGGACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAAC
GCCATCACGCGGCATCTCTCCGCCACATCCAAGCCACGATGCAAATAACC
GAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGC
ATCGGCCAGCCACTCCATTCGTGTCCGTCTGGCAGCCACAGCTGAGAAAT
ATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATT
TCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATACTCCATGATAT
TGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGT
CCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCG
AAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGC
TCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTT
CCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTG
GAAACCATAAATATCCTGGAGAGCTGTGCATCAGCAGCGCTATCGCCAGG
GGCAAGTGTTAAGAAGAAGGTTGTGTTCACAGCGTCTCCAAATACTCAGC
ACACCTCGATGTTTGGATGTCCCCGTGGTGTCTCACCATGGGTGGCTCGA
TACATGATCAGTGTCACGTCTATGGAGGCACCGCAAATTCTCCGACGTAT
CATTATGTCTTTTTTGAACAAGGCTCCGACCGAGTTTCTCAACATTGTGC
GATCGGTATTGGATTCTCCTACTGTAGAAGCTAGGAACGAGAGTACAACA
CTACCGGCTTCATCCGCAACCAGGGAGCCATTAATGGTCACTCCGATACA
TATCCTGGCTATGGATATATTCGCTCATTGGCTGGTTTTAGTCATGTTAT
TGGATGGGGTGTGGTGGATCAGTAATATTGGACAGTGGGAGCTCAGCCAA
GTCATCTCTTTGATGAAAACACAGAATGTCCTCTCCCAGTTGGCTGACAG
TAGCGAAATGTGGTGGCCCGAGAGTATGTACTTGGTTAAGCGAGAGCTCA
CGCCCGATTCCTGGCATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009546KJC3_009546Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.utr5p1KJC3_009546-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.exon1KJC3_009546-T1.exon1Aspergillus niger KJC3exon
KJC3_009546-T1.exon2KJC3_009546-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.cdsKJC3_009546-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1.utr3p1KJC3_009546-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009546-T1KJC3_009546-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:727829..731634 +
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