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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:732345..733685+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009548-T1 ID=KJC3_009548-T1|Name=KJC3_009548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1341bp|location=Sequence derived from alignment at ch7:732345..733685+ (Aspergillus niger KJC3)
CCAAGACTACCCATAGGAATCTGGTTTAAGGACATTGATCACATCTCTAA
CTAAACTCATGGCCGTCAGAAAAACACGCACAGGACGTCTTGCGCGTGCT
GCACAAGGCGAAAGACATTCCGTTCGCTCATCCCCAGTGAAGTCCCCAAG
GACCAATCCGACAAGGACTGGCCGTCAACGCGTGACACAGGGAAGTCTCA
ACCAGCCTGACGAACTGTTCTTGCCCCGAATCGCGTCATGGTCTGACACC
CTTGCTGCGGTTGAAAAGCAATCCCTTGGAACCCAGATACATGAATACAA
AGAATGGAGGCGTAAGTGCATTCCTTTCCGTCTACGGTCTCCTTAAGTCG
CCCTTGGTGCTCACTCATATCGCGCAGGAAATGGATCGGCACATGAAGAT
TACTGCCGTATTTGTCAAGCGGCTGGGGGAAGGCTCGAGCCATGTTCAAC
CTGTCGACTCGCCTTCCATGCCGATTGTATTCCAGCAGGTTTTCTGCGCG
ATTCCCGAGATTCACTCTTTTGTCCCATATGCGTCCGGCGCGGTTGGCAT
ACCACTCCTCCTCCATTGACACCACCGGGTTCACCACCGCCGGCAGAACA
GGAAGATTCCGCATCTGCTGCAGCTCCGGCTATGTCAGTGCTTGATTCAG
GCACAAATCCTTCGTCAAATACACTCTCTCATATTAGCACCTCCGGCAGA
CCCTCAGGTGTCTCTGCAGTACAGCAAGCTCGAACGGGTGATAGACAGGA
TATATCGGCTGGCGACTCTACTGTCCCCAAACCGCTATATAATCTCCTTG
GTAATGATGATGAAGCCACAGACGATATCGGAACACCCCAACGACCGCGA
CGTCAGCGCAAGTCTCGGTATACAAACCTGCCAACGGAAGTAGATACAGC
CCTGTCGGTTCTATACCGAGAGCTCGAGTCGAATGAATCCCTCAGGAGGG
AAGTTGAGGAGCTACGCAGCGAGAATACAAAATATAATCAAACTATTAGA
ATTCGCGATCTCAGTATCATCGCTCTACGCAGAGAATTGGACTATCGACG
TTCTTCAGAACAAGAGATGGAAACACTGCGAGCCACGGCTACTCAACTGG
AGAATGCCAAAAAGGAGATCCAGGAGCTACGGGCCAGAAACGAAGCTTTA
AATGCGGAACTACAAACTTCGAGACATGAGACGACGGAGGCTCAGGCGCT
TGTTCAGGACTGGAAGGCAAAGCTCTCACAACTCATTGGGAATTGAGGTT
CTCTCCTTGCAGCAAAGTTCTGGCGCTCAACTTTATGATACCACGATATT
TATTTCACTACCAAATTGATCTGTTTTTATTTACTTCCATG back to topCoding sequence (CDS) from alignment at ch7:732345..733685+ >KJC3_009548-T1 ID=KJC3_009548-T1|Name=KJC3_009548-T1|organism=Aspergillus niger KJC3|type=CDS|length=2244bp|location=Sequence derived from alignment at ch7:732345..733685+ (Aspergillus niger KJC3)
ATGGCCGTCAGAAAAACACGCACAGGACGTCTTGCGCGTGCTGCACAAGG
CGAAAGACATTCCGTTCGCTCATCCCCAGTGAAGTCCCCAAGGACCAATC
CGACAAGGACTGGCCGTCAACGCGTGACACAGGGAAGTCTCAACCAGCCT
GACGAACTGTTCTTGCCCCGAATCGCGTCATGGTCTGACACCCTTGCTGC
GGTTGAAAAGCAATCCCTTGGAACCCAGATACATGAATACAAAGAATGGA
GGCGAAATGGATCGGCACATGAAGATTACTGCCGTATTTGTCAAGCGGCT
GGGGGAAGGCTCGAGCCATGTTCAACCTGTCGACTCGCCTTCCATGCCGA
TTGTATTCCAGCAGGTTTTCTGCGCGATTCCCGAGATTCACTCTTTTGTC
CCATATGCGTCCGGCGCGGTTGGCATACCACTCCTCCTCCATTGACACCA
CCGGGTTCACCACCGCCGGCAGAACAGGAAGATTCCGCATCTGCTGCAGC
TCCGGCTATGTCAGTGCTTGATTCAGGCACAAATCCTTCGTCAAATACAC
TCTCTCATATTAGCACCTCCGGCAGACCCTCAGGTGTCTCTGCAGTACAG
CAAGCTCGAACGGGTGATAGACAGGATATATCGGCTGGCGACTCTACTGT
CCCCAAACCGCTATATAATCTCCTTGGTAATGATGATGAAGCCACAGACG
ATATCGGAACACCCCAACGACCGCGACGTCAGCGCAAGTCTCGGTATACA
AACCTGCCAACGGAAGTAGATACAGCCCTGTCGGTTCTATACCGAGAGCT
CGAGTCGAATGAATCCCTCAGGAGGGAAGTTGAGGAGCTACGCAGCGAGA
ATACAAAATATAATCAAACTATTAGAATTCGCGATCTCAGTATCATCGCT
CTACGCAGAGAATTGGACTATCGACGTTCTTCAGAACAAGAGATGGAAAC
ACTGCGAGCCACGGCTACTCAACTGGAGAATGCCAAAAAGGAGATCCAGG
AGCTACGGGCCAGAAACGAAGCTTTAAATGCGGAACTACAAACTTCGAGA
CATGAGACGACGGAGGCTCAGGCGCTTGTTCAGGACTGGAAGGCAAAGCT
CTCACAACTCATTGGGAATTGAATGGCCGTCAGAAAAACACGCACAGGAC
GTCTTGCGCGTGCTGCACAAGGCGAAAGACATTCCGTTCGCTCATCCCCA
GTGAAGTCCCCAAGGACCAATCCGACAAGGACTGGCCGTCAACGCGTGAC
ACAGGGAAGTCTCAACCAGCCTGACGAACTGTTCTTGCCCCGAATCGCGT
CATGGTCTGACACCCTTGCTGCGGTTGAAAAGCAATCCCTTGGAACCCAG
ATACATGAATACAAAGAATGGAGGCGAAATGGATCGGCACATGAAGATTA
CTGCCGTATTTGTCAAGCGGCTGGGGGAAGGCTCGAGCCATGTTCAACCT
GTCGACTCGCCTTCCATGCCGATTGTATTCCAGCAGGTTTTCTGCGCGAT
TCCCGAGATTCACTCTTTTGTCCCATATGCGTCCGGCGCGGTTGGCATAC
CACTCCTCCTCCATTGACACCACCGGGTTCACCACCGCCGGCAGAACAGG
AAGATTCCGCATCTGCTGCAGCTCCGGCTATGTCAGTGCTTGATTCAGGC
ACAAATCCTTCGTCAAATACACTCTCTCATATTAGCACCTCCGGCAGACC
CTCAGGTGTCTCTGCAGTACAGCAAGCTCGAACGGGTGATAGACAGGATA
TATCGGCTGGCGACTCTACTGTCCCCAAACCGCTATATAATCTCCTTGGT
AATGATGATGAAGCCACAGACGATATCGGAACACCCCAACGACCGCGACG
TCAGCGCAAGTCTCGGTATACAAACCTGCCAACGGAAGTAGATACAGCCC
TGTCGGTTCTATACCGAGAGCTCGAGTCGAATGAATCCCTCAGGAGGGAA
GTTGAGGAGCTACGCAGCGAGAATACAAAATATAATCAAACTATTAGAAT
TCGCGATCTCAGTATCATCGCTCTACGCAGAGAATTGGACTATCGACGTT
CTTCAGAACAAGAGATGGAAACACTGCGAGCCACGGCTACTCAACTGGAG
AATGCCAAAAAGGAGATCCAGGAGCTACGGGCCAGAAACGAAGCTTTAAA
TGCGGAACTACAAACTTCGAGACATGAGACGACGGAGGCTCAGGCGCTTG
TTCAGGACTGGAAGGCAAAGCTCTCACAACTCATTGGGAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009548-T1.utr5p1 | KJC3_009548-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009548-T1.utr3p1 | KJC3_009548-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR019786 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001965 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:732345..733685 + |
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