KJC3_009551-T1, KJC3_009551-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_009551-T1
Unique Name	KJC3_009551-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch7:738789..740626-
coding sequence from alignment at ch7:738789..740626-

mRNA from alignment at ch7:738789..740626-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_009551-T1 ID=KJC3_009551-T1|Name=KJC3_009551-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1838bp|location=Sequence derived from alignment at ch7:738789..740626- (Aspergillus niger KJC3)
GGAAATTGTGCTGTTTGACTTTGTGACTGCCACATCTGACTGGCTGTCCC
GACTGAACGAGTATAAACTGTGCTCAACTGGTATTTGACATCCTTTTTGG
TCGTCCCCAATCATGTCGCCATCCCCTCAGGAGCTAGCTTCAAGGCTGAA
TCAATCTGGTAAACAACGACAGAAGCGATGGGTCACTAGGACCAGAACAG
GGTGCATCACTTGCAGGTATAAAAGTTCTTATCATTCTCATGGGTGGGTG
AACTCGCTGACTCGAAAAGAATCCGGCATATCAAATGCGACGAAACCAAG
CCGAGGTGGGTAGGATCTCTTCATTGATTGAATCGTACTCATTGGCAGAT
GGATAATATAGTTGCCAGAGATGCACATCCACTGGTCGGAAATGCGATGG
GTATCAAGACCCCCGCGCTAAACAGATTACCCGCCGCAAAAGCAAGAGGG
CCCAGCCAGATGGTCTGCTGCAGATGCCCTCTGCGTGGAGCTCTATTGGC
GGTAAGCCAATGAATCATGAACATTTTCACTACTTTGTAGTTGTTACTGC
TCCCACCTTGACTGGCTACTTCAACTCGGGATTTTGGTCCTACACGTTGC
CCCAGGTTTCATACTCCTATCCGGCTCTCTGGCATGCTATTACCGCGCTG
GCTTCTTTGCATAGAGACTTCTTGGAAGATGTGGCGCCACTTGCTATTAC
GCAGGATTGTAGTACGGTCAGGGTCCGTTTCGCTTTACAGCAACATACCA
GATCTATACAATCCTTGAGGGAGTTGATGTCCAAGCCGTGCTTGACGGTT
CATGACAAGATGGCTGTTCTAGCGACCTGTATTATATTTATCTGCCTATT
AAGTCTGCAGGGGTTTCACTCTCAGGCCATGGCACATGTGGCCAGTGCTA
TGGTCCTATGTCAGCAGTGGAATAGAGAGTTCCAGACCCATTCCCATGCA
TCTGAGACTATAGCTTCCGTCATACTTCTTCTAGCCCAACTTGACAGCCA
GGTCCGCCATATCTTTGCAATTCAAGGGTTAACTGTCCCATGGACTACTG
AGTTTAAGTTACCTGTCACTGAAGGGTGTTTTACGTCCCTTGATGAAGCA
CACGTCTCTCTGGAGGTCAATGTCAACAACCGCGCATTGAAGCTTTTAAC
AAGCGGCATTGATATCTCTGCACCTGAAGCGCTTGCCAAGAAGGAATATT
GTCTTCATGAACTTTATCGTTGGAACTCGAAACTGGAAACATATATCGCC
GTTTCACAGCATGAGACGGACAACACAACCATGAATGCTCTCTACCTGCG
CCGCTTGTACGCCAAAGTAATGCTGTCCCTGGACCCATCCAAAGGCGAGC
TAGCACATGACGACTTTATCGATGACTACGCGCAAATGCTTGACCTGGCA
AACAGAATCCTCGAGAGCCTGAACACCCCTGTAACGGAGGAATTCGATCC
CGGTTCGAGACCCGCGAAACAACGGCACTTCAGTGTAGAAAGTACAGTGA
CAGAGACCCTGTTCCTGATCGGGGTGCGTTGCCGTGAACCGACGATACGA
GGACGGGCGCTGGAGCTGATGAGGCTCTACCCACGCCGCGAAGGCATGTG
CGGGACGATGTTAGCTCTGAAACTCGGAGAGACGCTTGCCGAAATTGAAG
GGACAGCATGTCACACCGCCCCACCGGGTTTGTGCAGCGATGGAACATGG
GTGTGTGCTGATCATCGGGTGACAAAGATACAGTGTAAAGATGTCTCTGA
TCGGAAAGTTGCCGTGCTGATGAGAACAGCTGGAGAGGAAAAGCGCGGTT
TCGAAGGGAATTGGTTCGTATTCCATAAGACATGGTAG

Coding sequence (CDS) from alignment at ch7:738789..740626-

>KJC3_009551-T1 ID=KJC3_009551-T1|Name=KJC3_009551-T1|organism=Aspergillus niger KJC3|type=CDS|length=4851bp|location=Sequence derived from alignment at ch7:738789..740626- (Aspergillus niger KJC3)
TTGCCAGAGATGCACATCCACTGGTCGGAAATGCGATGGGTATCAAGACC
CCCGCGCTAAACAGATTACCCGCCGCAAAAGCAAGAGGGCCCAGCCAGAT
GGTCTGCTGCAGATGCCCTCTGCGTGGAGCTCTATTGGCGGTAAGCCAAT
GAATCATGAACATTTTCACTACTTTGTAGTTGTTACTGCTCCCACCTTGA
CTGGCTACTTCAACTCGGGATTTTGGTCCTACACGTTGCCCCAGGTTTCA
TACTCCTATCCGGCTCTCTGGCATGCTATTACCGCGCTGGCTTCTTTGCA
TAGAGACTTCTTGGAAGATGTGGCGCCACTTGCTATTACGCAGGATTGTA
GTACGGTCAGGGTCCGTTTCGCTTTACAGCAACATACCAGATCTATACAA
TCCTTGAGGGAGTTGATGTCCAAGCCGTGCTTGACGGTTCATGACAAGAT
GGCTGTTCTAGCGACCTGTATTATATTTATCTGCCTATTAAGTCTGCAGG
GGTTTCACTCTCAGGCCATGGCACATGTGGCCAGTGCTATGGTCCTATGT
CAGCAGTGGAATAGAGAGTTCCAGACCCATTCCCATGCATCTGAGACTAT
AGCTTCCGTCATACTTCTTCTAGCCCAACTTGACAGCCAGGTCCGCCATA
TCTTTGCAATTCAAGGGTTAACTGTCCCATGGACTACTGAGTTTAAGTTA
CCTGTCACTGAAGGGTGTTTTACGTCCCTTGATGAAGCACACGTCTCTCT
GGAGGTCAATGTCAACAACCGCGCATTGAAGCTTTTAACAAGCGGCATTG
ATATCTCTGCACCTGAAGCGCTTGCCAAGAAGGAATATTGTCTTCATGAA
CTTTATCGTTGGAACTCGAAACTGGAAACATATATCGCCGTTTCACAGCA
TGAGACGGACAACACAACCATGAATGCTCTCTACCTGCGCCGCTTGTACG
CCAAAGTAATGCTGTCCCTGGACCCATCCAAAGGCGAGCTAGCACATGAC
GACTTTATCGATGACTACGCGCAAATGCTTGACCTGGCAAACAGAATCCT
CGAGAGCCTGAACACCCCTGTAACGGAGGAATTCGATCCCGGTTCGAGAC
CCGCGAAACAACGGCACTTCAGTGTAGAAAGTACAGTGACAGAGACCCTG
TTCCTGATCGGGGTGCGTTGCCGTGAACCGACGATACGAGGACGGGCGCT
GGAGCTGATGAGGCTCTACCCACGCCGCGAAGGCATGTGCGGGACGATGT
TAGCTCTGAAACTCGGAGAGACGCTTGCCGAAATTGAAGGGACAGCATGT
CACACCGCCCCACCGGGTTTGTGCAGCGATGGAACATGGGTGTGTGCTGA
TCATCGGGTGACAAAGATACAGTGTAAAGATGTCTCTGATCGGAAAGTTG
CCGTGCTGATGAGAACAGCTGGAGAGGAAAAGCGCGGTTTCGAAGGGAAT
TGGTTCGTATTCCATAAGACATGGTAGAATCCGGCATATCAAATGCGACG
AAACCAAGCCGAGATGTCGCCATCCCCTCAGGAGCTAGCTTCAAGGCTGA
ATCAATCTGGTAAACAACGACAGAAGCGATGGGTCACTAGGACCAGAACA
GGGTGCATCACTTGCAGTTGCCAGAGATGCACATCCACTGGTCGGAAATG
CGATGGGTATCAAGACCCCCGCGCTAAACAGATTACCCGCCGCAAAAGCA
AGAGGGCCCAGCCAGATGGTCTGCTGCAGATGCCCTCTGCGTGGAGCTCT
ATTGGCGGTAAGCCAATGAATCATGAACATTTTCACTACTTTGTAGTTGT
TACTGCTCCCACCTTGACTGGCTACTTCAACTCGGGATTTTGGTCCTACA
CGTTGCCCCAGGTTTCATACTCCTATCCGGCTCTCTGGCATGCTATTACC
GCGCTGGCTTCTTTGCATAGAGACTTCTTGGAAGATGTGGCGCCACTTGC
TATTACGCAGGATTGTAGTACGGTCAGGGTCCGTTTCGCTTTACAGCAAC
ATACCAGATCTATACAATCCTTGAGGGAGTTGATGTCCAAGCCGTGCTTG
ACGGTTCATGACAAGATGGCTGTTCTAGCGACCTGTATTATATTTATCTG
CCTATTAAGTCTGCAGGGGTTTCACTCTCAGGCCATGGCACATGTGGCCA
GTGCTATGGTCCTATGTCAGCAGTGGAATAGAGAGTTCCAGACCCATTCC
CATGCATCTGAGACTATAGCTTCCGTCATACTTCTTCTAGCCCAACTTGA
CAGCCAGGTCCGCCATATCTTTGCAATTCAAGGGTTAACTGTCCCATGGA
CTACTGAGTTTAAGTTACCTGTCACTGAAGGGTGTTTTACGTCCCTTGAT
GAAGCACACGTCTCTCTGGAGGTCAATGTCAACAACCGCGCATTGAAGCT
TTTAACAAGCGGCATTGATATCTCTGCACCTGAAGCGCTTGCCAAGAAGG
AATATTGTCTTCATGAACTTTATCGTTGGAACTCGAAACTGGAAACATAT
ATCGCCGTTTCACAGCATGAGACGGACAACACAACCATGAATGCTCTCTA
CCTGCGCCGCTTGTACGCCAAAGTAATGCTGTCCCTGGACCCATCCAAAG
GCGAGCTAGCACATGACGACTTTATCGATGACTACGCGCAAATGCTTGAC
CTGGCAAACAGAATCCTCGAGAGCCTGAACACCCCTGTAACGGAGGAATT
CGATCCCGGTTCGAGACCCGCGAAACAACGGCACTTCAGTGTAGAAAGTA
CAGTGACAGAGACCCTGTTCCTGATCGGGGTGCGTTGCCGTGAACCGACG
ATACGAGGACGGGCGCTGGAGCTGATGAGGCTCTACCCACGCCGCGAAGG
CATGTGCGGGACGATGTTAGCTCTGAAACTCGGAGAGACGCTTGCCGAAA
TTGAAGGGACAGCATGTCACACCGCCCCACCGGGTTTGTGCAGCGATGGA
ACATGGGTGTGTGCTGATCATCGGGTGACAAAGATACAGTGTAAAGATGT
CTCTGATCGGAAAGTTGCCGTGCTGATGAGAACAGCTGGAGAGGAAAAGC
GCGGTTTCGAAGGGAATTGGTTCGTATTCCATAAGACATGGTAGAATCCG
GCATATCAAATGCGACGAAACCAAGCCGAGATGTCGCCATCCCCTCAGGA
GCTAGCTTCAAGGCTGAATCAATCTGGTAAACAACGACAGAAGCGATGGG
TCACTAGGACCAGAACAGGGTGCATCACTTGCAGTTGCCAGAGATGCACA
TCCACTGGTCGGAAATGCGATGGGTATCAAGACCCCCGCGCTAAACAGAT
TACCCGCCGCAAAAGCAAGAGGGCCCAGCCAGATGGTCTGCTGCAGATGC
CCTCTGCGTGGAGCTCTATTGGCGGTAAGCCAATGAATCATGAACATTTT
CACTACTTTGTAGTTGTTACTGCTCCCACCTTGACTGGCTACTTCAACTC
GGGATTTTGGTCCTACACGTTGCCCCAGGTTTCATACTCCTATCCGGCTC
TCTGGCATGCTATTACCGCGCTGGCTTCTTTGCATAGAGACTTCTTGGAA
GATGTGGCGCCACTTGCTATTACGCAGGATTGTAGTACGGTCAGGGTCCG
TTTCGCTTTACAGCAACATACCAGATCTATACAATCCTTGAGGGAGTTGA
TGTCCAAGCCGTGCTTGACGGTTCATGACAAGATGGCTGTTCTAGCGACC
TGTATTATATTTATCTGCCTATTAAGTCTGCAGGGGTTTCACTCTCAGGC
CATGGCACATGTGGCCAGTGCTATGGTCCTATGTCAGCAGTGGAATAGAG
AGTTCCAGACCCATTCCCATGCATCTGAGACTATAGCTTCCGTCATACTT
CTTCTAGCCCAACTTGACAGCCAGGTCCGCCATATCTTTGCAATTCAAGG
GTTAACTGTCCCATGGACTACTGAGTTTAAGTTACCTGTCACTGAAGGGT
GTTTTACGTCCCTTGATGAAGCACACGTCTCTCTGGAGGTCAATGTCAAC
AACCGCGCATTGAAGCTTTTAACAAGCGGCATTGATATCTCTGCACCTGA
AGCGCTTGCCAAGAAGGAATATTGTCTTCATGAACTTTATCGTTGGAACT
CGAAACTGGAAACATATATCGCCGTTTCACAGCATGAGACGGACAACACA
ACCATGAATGCTCTCTACCTGCGCCGCTTGTACGCCAAAGTAATGCTGTC
CCTGGACCCATCCAAAGGCGAGCTAGCACATGACGACTTTATCGATGACT
ACGCGCAAATGCTTGACCTGGCAAACAGAATCCTCGAGAGCCTGAACACC
CCTGTAACGGAGGAATTCGATCCCGGTTCGAGACCCGCGAAACAACGGCA
CTTCAGTGTAGAAAGTACAGTGACAGAGACCCTGTTCCTGATCGGGGTGC
GTTGCCGTGAACCGACGATACGAGGACGGGCGCTGGAGCTGATGAGGCTC
TACCCACGCCGCGAAGGCATGTGCGGGACGATGTTAGCTCTGAAACTCGG
AGAGACGCTTGCCGAAATTGAAGGGACAGCATGTCACACCGCCCCACCGG
GTTTGTGCAGCGATGGAACATGGGTGTGTGCTGATCATCGGGTGACAAAG
ATACAGTGTAAAGATGTCTCTGATCGGAAAGTTGCCGTGCTGATGAGAAC
AGCTGGAGAGGAAAAGCGCGGTTTCGAAGGGAATTGGTTCGTATTCCATA
AGACATGGTAGAATCCGGCATATCAAATGCGACGAAACCAAGCCGAGATG
TCGCCATCCCCTCAGGAGCTAGCTTCAAGGCTGAATCAATCTGGTAAACA
ACGACAGAAGCGATGGGTCACTAGGACCAGAACAGGGTGCATCACTTGCA
G

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_009551	KJC3_009551	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009551-T1	KJC3_009551-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009551-T1.cds	KJC3_009551-T1.cds	Aspergillus niger KJC3	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009551-T1.exon3	KJC3_009551-T1.exon3	Aspergillus niger KJC3	exon
KJC3_009551-T1.exon2	KJC3_009551-T1.exon2	Aspergillus niger KJC3	exon
KJC3_009551-T1.exon1	KJC3_009551-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_009551-T1.utr5p1	KJC3_009551-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch7	supercontig	ch7:738789..740626 -

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KJC3_009551-T1, KJC3_009551-T1 (mRNA) Aspergillus niger KJC3