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KJC3_009562-T1, KJC3_009562-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009562-T1
Unique NameKJC3_009562-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:765795..767902+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009562-T1 ID=KJC3_009562-T1|Name=KJC3_009562-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2108bp|location=Sequence derived from alignment at ch7:765795..767902+ (Aspergillus niger KJC3)
CTTGTCCTCTGCCCATACAAGGATAATTTAAAAATCCGCACATATCCGGA ATACAGTTTTGAAAGCTAACATCGACGCGGAGATGAGCCAACCTTCAGCT GCGACTCGCCGCCATCGTAGGGGTATCGCCTGTGACGAGTGCCGACGCCG GAAACTGCGCTGCGACGGACAGAAACCTCAATGTGGACGCTGTCTGGATA CGGGAGTCGCTTGTGAGTTGACCCAGCGCAGTGCGCGAGGACCTAAAAAA GGTCACTTGCGCGATCTGAAGAACCGACTCGTGTATCTGGAGGCCTTGCT GGAGAACAGCGTGCCGGCAGAGGATACGCAACAGGATCTCCACGCCATTA TCGAGTATACTGGTGATCCGTCGCTACTACCCTTGGTGAGGGCGGGCCAT GCGGCTGAAGTTGGCACATCTGAGCCCTGGATTTCCGCGGGTACGGTGAC CTCCAATTCAGAGCACGAGGGGCTTCTACAACACGACTTGACACCCGGTG TACCTTCTTTCTCTCAACGGTCCTCCGTTGGCCCAATTATATCCGGCCAT AGCACGCCGATACAGAGTATAACCGGTCTTATGCAGGACGAATTGTAAGC ACCTCAATCAGGAATCAAAACACAATGCTAATTATGACTAGAGACCAGCT TTACCTAGACCGTGTCCATAATTCTATCCCAATCCTCCATCAGCGACGGT ACATGTCCTGGTCCAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTA CAGTATGCAATGTGGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGA CATGATAGAACCGCTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCA CTGTTGCGGCAAATGAGGACAGTAATATTGACACCGAAATCGGCCAAGCC TGGGTTCTTCTCGTGACCTTTGAGTCAATGCGCACATATCATCGACAGGC ATGGATGAGCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATC ATGAGCTCGACAGCCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGT GATGACTTTATTGAGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTA CTTTTTGGACCATATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGA ATGAGCATGTGGTAAGAATGATCCCAGCCCATTACTATATCCAGTTTTTG TATTCAATTTTGTAGATCTGCACCCGTCTTCCAGCGTCGGATTCCAAATT CCAGAACGGATATCGGGAACTAGGACCGTTCCTATCCGAAGCTATGACGG ACTCAACCCTCCAAGTCCGATCGTCGTTCACCGAGTGCCTCATCCTCGTT ACCATATGCGGTCGCAGTCTCTTCCAAAGACAACAGTGTCAAATATCCAA GGCATACGGGGATATGACACTCGACTGGACGGAACAGCGGCAATGGCTGG ACAGACTCCTCTTGAGCCGATTTCAGGTGCTTTCGCAGTGTTACCCGGAC CCGACAGAATCCAATGACCACTTACTACTATTTACGCACATCTTAGCTCA GGCTACTGTTATATACTACTGCAAAACTATGATCCAGTCGGACGCGCCAA GCAACTTCACGCAGAACAGCGAATTCAGGTATGAGCATAGAGCCTTAGAA GCGTCTAAGAATATCATCCGTCTGGCAACGACACTGCCCGAGCTGCCGTT TTCTAAGGTAAGATCTTTTTCTTCAAAAAGCCCGGCTTTTAACAATTCCT TTGTAGGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCGAGTT TCTCTACAGCAACATACACAATGGCATATCCGTCCAATCGCCCATCCAGG ACTTGTTTCATATTTTCCGTGAGCTCAAGAATGTTAATAATCACGAGCAA AGCTACCTGGATCTACTACCGCGATCATGTATTTCAAAAACAGCGGTGAT GGTAGGGCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCACTTGTGATA GCGTCGGTAATTCGTGATATCTTGCCCCAAATATCACTTCTTGACACGCT ACAGTATAACAATTTTCTCTTGGGTGTCAGAAAGCCTCGGGCGATGAGCA TTTCGTTC
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Coding sequence (CDS) from alignment at ch7:765795..767902+

>KJC3_009562-T1 ID=KJC3_009562-T1|Name=KJC3_009562-T1|organism=Aspergillus niger KJC3|type=CDS|length=7020bp|location=Sequence derived from alignment at ch7:765795..767902+ (Aspergillus niger KJC3)
ATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTG
TGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAAT
GTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGT
GCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGT
GTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAAC
AGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCC
TTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGAT
TTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAAC
ACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGC
CCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTAT
GCAGGACGAATTAGACCAGCTTTACCTAGACCGTGTCCATAATTCTATCC
CAATCCTCCATCAGCGACGGTACATGTCCTGGTCCAAATCTAGTACCAAA
ACGGAACCCCGTAGATGCTTACAGTATGCAATGTGGACACTAGCCGCATT
GCTCTCCACCCAGTTCCGAGACATGATAGAACCGCTGTATCAGGAGACAA
AGCGCATGCTCGACCAACTCACTGTTGCGGCAAATGAGGACAGTAATATT
GACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACCTTTGAGTCAAT
GCGCACATATCATCGACAGGCATGGATGAGCGCCGGGAGTGCGTTTCGCT
TCGTGCAAGCCATGCACTATCATGAGCTCGACAGCCTAGATGGCAAAAGA
GGCTCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTCGAGGAGAGACG
TCGAGTGTTCTGGATGGCGTACTTTTTGGACCATATCATCAGTATGCGCG
GCGACTGGCCAATCACTCTGAATGAGCATGTGATCTGCACCCGTCTTCCA
GCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCGTTCCT
ATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTTCACCG
AGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAGACAA
CAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGGACGGA
ACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTGCTTT
CGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTACTATTT
ACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACTATGAT
CCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAGGTATG
AGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAACGACA
CTGCCCGAGCTGCCGTTTTCTAAGGTCCACCCTTTGATGCCCATGCCATT
GTTCATTTGCGCCGAGTTTCTCTACAGCAACATACACAATGGCATATCCG
TCCAATCGCCCATCCAGGACTTGTTTCATATTTTCCGTGAGCTCAAGAAT
GTTAATAATCACGAGCAAAGCTACCTGGATCTACTACCGCGATCATGTAT
TTCAAAAACAGCGGTGATGGTAGGGCTTGGTGATGAGGGGGGTGCGAGTA
GTTAGATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATC
GCCTGTGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACC
TCAATGTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGC
GCAGTGCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGA
CTCGTGTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATAC
GCAACAGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTAC
TACCCTTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCC
TGGATTTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCT
ACAACACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCG
TTGGCCCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGT
CTTATGCAGGACGAATTAGACCAGCTTTACCTAGACCGTGTCCATAATTC
TATCCCAATCCTCCATCAGCGACGGTACATGTCCTGGTCCAAATCTAGTA
CCAAAACGGAACCCCGTAGATGCTTACAGTATGCAATGTGGACACTAGCC
GCATTGCTCTCCACCCAGTTCCGAGACATGATAGAACCGCTGTATCAGGA
GACAAAGCGCATGCTCGACCAACTCACTGTTGCGGCAAATGAGGACAGTA
ATATTGACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACCTTTGAG
TCAATGCGCACATATCATCGACAGGCATGGATGAGCGCCGGGAGTGCGTT
TCGCTTCGTGCAAGCCATGCACTATCATGAGCTCGACAGCCTAGATGGCA
AAAGAGGCTCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTCGAGGAG
AGACGTCGAGTGTTCTGGATGGCGTACTTTTTGGACCATATCATCAGTAT
GCGCGGCGACTGGCCAATCACTCTGAATGAGCATGTGATCTGCACCCGTC
TTCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCG
TTCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTT
CACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAA
GACAACAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGG
ACGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGT
GCTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTAC
TATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACT
ATGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAG
GTATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAA
CGACACTGCCCGAGCTGCCGTTTTCTAAGGTCCACCCTTTGATGCCCATG
CCATTGTTCATTTGCGCCGAGTTTCTCTACAGCAACATACACAATGGCAT
ATCCGTCCAATCGCCCATCCAGGACTTGTTTCATATTTTCCGTGAGCTCA
AGAATGTTAATAATCACGAGCAAAGCTACCTGGATCTACTACCGCGATCA
TGTATTTCAAAAACAGCGGTGATGGTAGGGCTTGGTGATGAGGGGGGTGC
GAGTAGTTAGATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGG
GTATCGCCTGTGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAG
AAACCTCAATGTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGAC
CCAGCGCAGTGCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGA
ACCGACTCGTGTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAG
GATACGCAACAGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTC
GCTACTACCCTTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTG
AGCCCTGGATTTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGG
CTTCTACAACACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTC
CTCCGTTGGCCCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAA
CCGGTCTTATGCAGGACGAATTAGACCAGCTTTACCTAGACCGTGTCCAT
AATTCTATCCCAATCCTCCATCAGCGACGGTACATGTCCTGGTCCAAATC
TAGTACCAAAACGGAACCCCGTAGATGCTTACAGTATGCAATGTGGACAC
TAGCCGCATTGCTCTCCACCCAGTTCCGAGACATGATAGAACCGCTGTAT
CAGGAGACAAAGCGCATGCTCGACCAACTCACTGTTGCGGCAAATGAGGA
CAGTAATATTGACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACCT
TTGAGTCAATGCGCACATATCATCGACAGGCATGGATGAGCGCCGGGAGT
GCGTTTCGCTTCGTGCAAGCCATGCACTATCATGAGCTCGACAGCCTAGA
TGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTCG
AGGAGAGACGTCGAGTGTTCTGGATGGCGTACTTTTTGGACCATATCATC
AGTATGCGCGGCGACTGGCCAATCACTCTGAATGAGCATGTGATCTGCAC
CCGTCTTCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAG
GACCGTTCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCG
TCGTTCACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTT
CCAAAGACAACAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCG
ACTGGACGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTT
CAGGTGCTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTT
ACTACTATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCA
AAACTATGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAA
TTCAGGTATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCT
GGCAACGACACTGCCCGAGCTGCCGTTTTCTAAGGTCCACCCTTTGATGC
CCATGCCATTGTTCATTTGCGCCGAGTTTCTCTACAGCAACATACACAAT
GGCATATCCGTCCAATCGCCCATCCAGGACTTGTTTCATATTTTCCGTGA
GCTCAAGAATGTTAATAATCACGAGCAAAGCTACCTGGATCTACTACCGC
GATCATGTATTTCAAAAACAGCGGTGATGGTAGGGCTTGGTGATGAGGGG
GGTGCGAGTAGTTAGATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCG
TAGGGGTATCGCCTGTGACGAGTGCCGACGCCGGAAACTGCGCTGCGACG
GACAGAAACCTCAATGTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAG
TTGACCCAGCGCAGTGCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCT
GAAGAACCGACTCGTGTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGG
CAGAGGATACGCAACAGGATCTCCACGCCATTATCGAGTATACTGGTGAT
CCGTCGCTACTACCCTTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCAC
ATCTGAGCCCTGGATTTCCGCGGGTACGGTGACCTCCAATTCAGAGCACG
AGGGGCTTCTACAACACGACTTGACACCCGGTGTACCTTCTTTCTCTCAA
CGGTCCTCCGTTGGCCCAATTATATCCGGCCATAGCACGCCGATACAGAG
TATAACCGGTCTTATGCAGGACGAATTAGACCAGCTTTACCTAGACCGTG
TCCATAATTCTATCCCAATCCTCCATCAGCGACGGTACATGTCCTGGTCC
AAATCTAGTACCAAAACGGAACCCCGTAGATGCTTACAGTATGCAATGTG
GACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGACATGATAGAACCGC
TGTATCAGGAGACAAAGCGCATGCTCGACCAACTCACTGTTGCGGCAAAT
GAGGACAGTAATATTGACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGT
GACCTTTGAGTCAATGCGCACATATCATCGACAGGCATGGATGAGCGCCG
GGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATCATGAGCTCGACAGC
CTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTGATGACTTTATTGA
GGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTACTTTTTGGACCATA
TCATCAGTATGCGCGGCGACTGGCCAATCACTCTGAATGAGCATGTGATC
TGCACCCGTCTTCCAGCGTCGGATTCCAAATTCCAGAACGGATATCGGGA
ACTAGGACCGTTCCTATCCGAAGCTATGACGGACTCAACCCTCCAAGTCC
GATCGTCGTTCACCGAGTGCCTCATCCTCGTTACCATATGCGGTCGCAGT
CTCTTCCAAAGACAACAGTGTCAAATATCCAAGGCATACGGGGATATGAC
ACTCGACTGGACGGAACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCC
GATTTCAGGTGCTTTCGCAGTGTTACCCGGACCCGACAGAATCCAATGAC
CACTTACTACTATTTACGCACATCTTAGCTCAGGCTACTGTTATATACTA
CTGCAAAACTATGATCCAGTCGGACGCGCCAAGCAACTTCACGCAGAACA
GCGAATTCAGGTATGAGCATAGAGCCTTAGAAGCGTCTAAGAATATCATC
CGTCTGGCAACGACACTGCCCGAGCTGCCGTTTTCTAAGGTCCACCCTTT
GATGCCCATGCCATTGTTCATTTGCGCCGAGTTTCTCTACAGCAACATAC
ACAATGGCATATCCGTCCAATCGCCCATCCAGGACTTGTTTCATATTTTC
CGTGAGCTCAAGAATGTTAATAATCACGAGCAAAGCTACCTGGATCTACT
ACCGCGATCATGTATTTCAAAAACAGCGGTGATGGTAGGGCTTGGTGATG
AGGGGGGTGCGAGTAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009562KJC3_009562Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T1KJC3_009562-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T1.utr5p1KJC3_009562-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T1.exon1KJC3_009562-T1.exon1Aspergillus niger KJC3exon
KJC3_009562-T1.exon2KJC3_009562-T1.exon2Aspergillus niger KJC3exon
KJC3_009562-T1.exon3KJC3_009562-T1.exon3Aspergillus niger KJC3exon
KJC3_009562-T1.exon4KJC3_009562-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T1.cdsKJC3_009562-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T1.utr3p1KJC3_009562-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:765795..767902 +