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KJC3_009562-T2, KJC3_009562-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009562-T2
Unique NameKJC3_009562-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:765795..767902+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009562-T2 ID=KJC3_009562-T2|Name=KJC3_009562-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2108bp|location=Sequence derived from alignment at ch7:765795..767902+ (Aspergillus niger KJC3)
CTTGTCCTCTGCCCATACAAGGATAATTTAAAAATCCGCACATATCCGGA
ATACAGTTTTGAAAGCTAACATCGACGCGGAGATGAGCCAACCTTCAGCT
GCGACTCGCCGCCATCGTAGGGGTATCGCCTGTGACGAGTGCCGACGCCG
GAAACTGCGCTGCGACGGACAGAAACCTCAATGTGGACGCTGTCTGGATA
CGGGAGTCGCTTGTGAGTTGACCCAGCGCAGTGCGCGAGGACCTAAAAAA
GGTCACTTGCGCGATCTGAAGAACCGACTCGTGTATCTGGAGGCCTTGCT
GGAGAACAGCGTGCCGGCAGAGGATACGCAACAGGATCTCCACGCCATTA
TCGAGTATACTGGTGATCCGTCGCTACTACCCTTGGTGAGGGCGGGCCAT
GCGGCTGAAGTTGGCACATCTGAGCCCTGGATTTCCGCGGGTACGGTGAC
CTCCAATTCAGAGCACGAGGGGCTTCTACAACACGACTTGACACCCGGTG
TACCTTCTTTCTCTCAACGGTCCTCCGTTGGCCCAATTATATCCGGCCAT
AGCACGCCGATACAGAGTATAACCGGTCTTATGCAGGACGAATTGTAAGC
ACCTCAATCAGGAATCAAAACACAATGCTAATTATGACTAGAGACCAGCT
TTACCTAGACCGTGTCCATAATTCTATCCCAATCCTCCATCAGCGACGGT
ACATGTCCTGGTCCAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTA
CAGTATGCAATGTGGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGA
CATGATAGAACCGCTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCA
CTGTTGCGGCAAATGAGGACAGTAATATTGACACCGAAATCGGCCAAGCC
TGGGTTCTTCTCGTGACCTTTGAGTCAATGCGCACATATCATCGACAGGC
ATGGATGAGCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATC
ATGAGCTCGACAGCCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGT
GATGACTTTATTGAGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTA
CTTTTTGGACCATATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGA
ATGAGCATGTGGTAAGAATGATCCCAGCCCATTACTATATCCAGTTTTTG
TATTCAATTTTGTAGATCTGCACCCGTCTTCCAGCGTCGGATTCCAAATT
CCAGAACGGATATCGGGAACTAGGACCGTTCCTATCCGAAGCTATGACGG
ACTCAACCCTCCAAGTCCGATCGTCGTTCACCGAGTGCCTCATCCTCGTT
ACCATATGCGGTCGCAGTCTCTTCCAAAGACAACAGTGTCAAATATCCAA
GGCATACGGGGATATGACACTCGACTGGACGGAACAGCGGCAATGGCTGG
ACAGACTCCTCTTGAGCCGATTTCAGGTGCTTTCGCAGTGTTACCCGGAC
CCGACAGAATCCAATGACCACTTACTACTATTTACGCACATCTTAGCTCA
GGCTACTGTTATATACTACTGCAAAACTATGATCCAGTCGGACGCGCCAA
GCAACTTCACGCAGAACAGCGAATTCAGGTATGAGCATAGAGCCTTAGAA
GCGTCTAAGAATATCATCCGTCTGGCAACGACACTGCCCGAGCTGCCGTT
TTCTAAGGTAAGATCTTTTTCTTCAAAAAGCCCGGCTTTTAACAATTCCT
TTGTAGGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCGAGTT
TCTCTACAGCAACATACACAATGGCATATCCGTCCAATCGCCCATCCAGG
ACTTGTTTCATATTTTCCGTGAGCTCAAGAATGTTAATAATCACGAGCAA
AGCTACCTGGATCTACTACCGCGATCATGTATTTCAAAAACAGCGGTGAT
GGTAGGGCTTGGTGATGAGGGGGGTGCGAGTAGTTAGATCACTTGTGATA
GCGTCGGTAATTCGTGATATCTTGCCCCAAATATCACTTCTTGACACGCT
ACAGTATAACAATTTTCTCTTGGGTGTCAGAAAGCCTCGGGCGATGAGCA
TTTCGTTC
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Coding sequence (CDS) from alignment at ch7:765795..767902+

>KJC3_009562-T2 ID=KJC3_009562-T2|Name=KJC3_009562-T2|organism=Aspergillus niger KJC3|type=CDS|length=5067bp|location=Sequence derived from alignment at ch7:765795..767902+ (Aspergillus niger KJC3)
ATGAGCCAACCTTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTG
TGACGAGTGCCGACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAAT
GTGGACGCTGTCTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGT
GCGCGAGGACCTAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGT
GTATCTGGAGGCCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAAC
AGGATCTCCACGCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCC
TTGGTGAGGGCGGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGAT
TTCCGCGGGTACGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAAC
ACGACTTGACACCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGC
CCAATTATATCCGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTAT
GCAGGACGAATTAGACCAGCTTTACCTAGACCGTGTCCATAATTCTATCC
CAATCCTCCATCAGCGACGGTACATGTCCTGGTCCAAATCTAGTACCAAA
ACGGAACCCCGTAGATGCTTACAGTATGCAATGTGGACACTAGCCGCATT
GCTCTCCACCCAGTTCCGAGACATGATAGAACCGCTGTATCAGGAGACAA
AGCGCATGCTCGACCAACTCACTGTTGCGGCAAATGAGGACAGTAATATT
GACACCGAAATCGGCCAAGCCTGGGTTCTTCTCGTGACCTTTGAGTCAAT
GCGCACATATCATCGACAGGCATGGATGAGCGCCGGGAGTGCGTTTCGCT
TCGTGCAAGCCATGCACTATCATGAGCTCGACAGCCTAGATGGCAAAAGA
GGCTCGGCTTATGCTCAGCGTGATGACTTTATTGAGGTCGAGGAGAGACG
TCGAGTGTTCTGGATGGCGTACTTTTTGGACCATATCATCAGTATGCGCG
GCGACTGGCCAATCACTCTGAATGAGCATGTGATCTGCACCCGTCTTCCA
GCGTCGGATTCCAAATTCCAGAACGGATATCGGGAACTAGGACCGTTCCT
ATCCGAAGCTATGACGGACTCAACCCTCCAAGTCCGATCGTCGTTCACCG
AGTGCCTCATCCTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAGACAA
CAGTGTCAAATATCCAAGGCATACGGGGATATGACACTCGACTGGACGGA
ACAGCGGCAATGGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTGCTTT
CGCAGTGTTACCCGGACCCGACAGAATCCAATGACCACTTACTACTATTT
ACGCACATCTTAGCTCAGGCTACTGTTATATACTACTGCAAAACTATGAT
CCAGTCGGACGCGCCAAGCAACTTCACGCAGAACAGCGAATTCAGGTATG
AGCATAGAGCCTTAGAAGCGTCTAAGAATATCATCCGTCTGGCAACGACA
CTGCCCGAGCTGCCGTTTTCTAAGGTAAGATCTTTTTCTTCAAAAAGCCC
GGCTTTTAACAATTCCTTTGTAGGTCCACCCTTTGATGCCCATGCCATTG
TTCATTTGCGCCGAGTTTCTCTACAGCAACATACACAATGGCATATCCGT
CCAATCGCCCATCCAGGACTTGTTTCATATTTTCCGTGAATGAGCCAACC
TTCAGCTGCGACTCGCCGCCATCGTAGGGGTATCGCCTGTGACGAGTGCC
GACGCCGGAAACTGCGCTGCGACGGACAGAAACCTCAATGTGGACGCTGT
CTGGATACGGGAGTCGCTTGTGAGTTGACCCAGCGCAGTGCGCGAGGACC
TAAAAAAGGTCACTTGCGCGATCTGAAGAACCGACTCGTGTATCTGGAGG
CCTTGCTGGAGAACAGCGTGCCGGCAGAGGATACGCAACAGGATCTCCAC
GCCATTATCGAGTATACTGGTGATCCGTCGCTACTACCCTTGGTGAGGGC
GGGCCATGCGGCTGAAGTTGGCACATCTGAGCCCTGGATTTCCGCGGGTA
CGGTGACCTCCAATTCAGAGCACGAGGGGCTTCTACAACACGACTTGACA
CCCGGTGTACCTTCTTTCTCTCAACGGTCCTCCGTTGGCCCAATTATATC
CGGCCATAGCACGCCGATACAGAGTATAACCGGTCTTATGCAGGACGAAT
TAGACCAGCTTTACCTAGACCGTGTCCATAATTCTATCCCAATCCTCCAT
CAGCGACGGTACATGTCCTGGTCCAAATCTAGTACCAAAACGGAACCCCG
TAGATGCTTACAGTATGCAATGTGGACACTAGCCGCATTGCTCTCCACCC
AGTTCCGAGACATGATAGAACCGCTGTATCAGGAGACAAAGCGCATGCTC
GACCAACTCACTGTTGCGGCAAATGAGGACAGTAATATTGACACCGAAAT
CGGCCAAGCCTGGGTTCTTCTCGTGACCTTTGAGTCAATGCGCACATATC
ATCGACAGGCATGGATGAGCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCC
ATGCACTATCATGAGCTCGACAGCCTAGATGGCAAAAGAGGCTCGGCTTA
TGCTCAGCGTGATGACTTTATTGAGGTCGAGGAGAGACGTCGAGTGTTCT
GGATGGCGTACTTTTTGGACCATATCATCAGTATGCGCGGCGACTGGCCA
ATCACTCTGAATGAGCATGTGATCTGCACCCGTCTTCCAGCGTCGGATTC
CAAATTCCAGAACGGATATCGGGAACTAGGACCGTTCCTATCCGAAGCTA
TGACGGACTCAACCCTCCAAGTCCGATCGTCGTTCACCGAGTGCCTCATC
CTCGTTACCATATGCGGTCGCAGTCTCTTCCAAAGACAACAGTGTCAAAT
ATCCAAGGCATACGGGGATATGACACTCGACTGGACGGAACAGCGGCAAT
GGCTGGACAGACTCCTCTTGAGCCGATTTCAGGTGCTTTCGCAGTGTTAC
CCGGACCCGACAGAATCCAATGACCACTTACTACTATTTACGCACATCTT
AGCTCAGGCTACTGTTATATACTACTGCAAAACTATGATCCAGTCGGACG
CGCCAAGCAACTTCACGCAGAACAGCGAATTCAGGTATGAGCATAGAGCC
TTAGAAGCGTCTAAGAATATCATCCGTCTGGCAACGACACTGCCCGAGCT
GCCGTTTTCTAAGGTAAGATCTTTTTCTTCAAAAAGCCCGGCTTTTAACA
ATTCCTTTGTAGGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGC
CGAGTTTCTCTACAGCAACATACACAATGGCATATCCGTCCAATCGCCCA
TCCAGGACTTGTTTCATATTTTCCGTGAATGAGCCAACCTTCAGCTGCGA
CTCGCCGCCATCGTAGGGGTATCGCCTGTGACGAGTGCCGACGCCGGAAA
CTGCGCTGCGACGGACAGAAACCTCAATGTGGACGCTGTCTGGATACGGG
AGTCGCTTGTGAGTTGACCCAGCGCAGTGCGCGAGGACCTAAAAAAGGTC
ACTTGCGCGATCTGAAGAACCGACTCGTGTATCTGGAGGCCTTGCTGGAG
AACAGCGTGCCGGCAGAGGATACGCAACAGGATCTCCACGCCATTATCGA
GTATACTGGTGATCCGTCGCTACTACCCTTGGTGAGGGCGGGCCATGCGG
CTGAAGTTGGCACATCTGAGCCCTGGATTTCCGCGGGTACGGTGACCTCC
AATTCAGAGCACGAGGGGCTTCTACAACACGACTTGACACCCGGTGTACC
TTCTTTCTCTCAACGGTCCTCCGTTGGCCCAATTATATCCGGCCATAGCA
CGCCGATACAGAGTATAACCGGTCTTATGCAGGACGAATTAGACCAGCTT
TACCTAGACCGTGTCCATAATTCTATCCCAATCCTCCATCAGCGACGGTA
CATGTCCTGGTCCAAATCTAGTACCAAAACGGAACCCCGTAGATGCTTAC
AGTATGCAATGTGGACACTAGCCGCATTGCTCTCCACCCAGTTCCGAGAC
ATGATAGAACCGCTGTATCAGGAGACAAAGCGCATGCTCGACCAACTCAC
TGTTGCGGCAAATGAGGACAGTAATATTGACACCGAAATCGGCCAAGCCT
GGGTTCTTCTCGTGACCTTTGAGTCAATGCGCACATATCATCGACAGGCA
TGGATGAGCGCCGGGAGTGCGTTTCGCTTCGTGCAAGCCATGCACTATCA
TGAGCTCGACAGCCTAGATGGCAAAAGAGGCTCGGCTTATGCTCAGCGTG
ATGACTTTATTGAGGTCGAGGAGAGACGTCGAGTGTTCTGGATGGCGTAC
TTTTTGGACCATATCATCAGTATGCGCGGCGACTGGCCAATCACTCTGAA
TGAGCATGTGATCTGCACCCGTCTTCCAGCGTCGGATTCCAAATTCCAGA
ACGGATATCGGGAACTAGGACCGTTCCTATCCGAAGCTATGACGGACTCA
ACCCTCCAAGTCCGATCGTCGTTCACCGAGTGCCTCATCCTCGTTACCAT
ATGCGGTCGCAGTCTCTTCCAAAGACAACAGTGTCAAATATCCAAGGCAT
ACGGGGATATGACACTCGACTGGACGGAACAGCGGCAATGGCTGGACAGA
CTCCTCTTGAGCCGATTTCAGGTGCTTTCGCAGTGTTACCCGGACCCGAC
AGAATCCAATGACCACTTACTACTATTTACGCACATCTTAGCTCAGGCTA
CTGTTATATACTACTGCAAAACTATGATCCAGTCGGACGCGCCAAGCAAC
TTCACGCAGAACAGCGAATTCAGGTATGAGCATAGAGCCTTAGAAGCGTC
TAAGAATATCATCCGTCTGGCAACGACACTGCCCGAGCTGCCGTTTTCTA
AGGTAAGATCTTTTTCTTCAAAAAGCCCGGCTTTTAACAATTCCTTTGTA
GGTCCACCCTTTGATGCCCATGCCATTGTTCATTTGCGCCGAGTTTCTCT
ACAGCAACATACACAATGGCATATCCGTCCAATCGCCCATCCAGGACTTG
TTTCATATTTTCCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009562KJC3_009562Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T2KJC3_009562-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T2.utr5p1KJC3_009562-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T2.exon1KJC3_009562-T2.exon1Aspergillus niger KJC3exon
KJC3_009562-T2.exon2KJC3_009562-T2.exon2Aspergillus niger KJC3exon
KJC3_009562-T2.exon3KJC3_009562-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T2.cdsKJC3_009562-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009562-T2.utr3p1KJC3_009562-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:765795..767902 +
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