|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:768335..769238+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009563-T1 ID=KJC3_009563-T1|Name=KJC3_009563-T1|organism=Aspergillus niger KJC3|type=mRNA|length=904bp|location=Sequence derived from alignment at ch7:768335..769238+ (Aspergillus niger KJC3)
ATGAGTCTCTTCATGCGAGCAAACGATGCTCTCAACGTCAACCCGATTGC
CGGCGTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTA
TCACAGCCATCTATATTGTATCATTCGTGAGTCATTTTCCCTCTGTACTC
TAGTTTTGATTTCACCTATTAACATTAAACATAGCTTGGCCTCCTGACAA
TGTCCTTCTCCGGAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACC
TTTCTCCTACTAGTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCT
CGGCTGGAGCGCTGTGGAACAAGTCAACAATCTCGACAACGGAGCAATAC
GCCAGATGTTCTGGGCGAAATACATCAACTGGGTTGTTGCATTCCCTTCG
CTCGCTCTCGCACTCGGCCTCGTCTCAGGGGTTTCATGGACGACCATGAT
CTGCAATATCGCACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCG
CATACACGCCCTCAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTA
TCCTGGGTGATTCTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGC
GCAACGGCTTGGGGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCA
ACCTGCTTTGGTTGTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGG
AATGTTATTGGGATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATAT
CCTCATGGTGCCGCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATT
GGGATTATCAGAAGTTGAGTATTGCCTTCAGTGATGCGAGGCCGAGCCGG
GAGGCACAGAGTTCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGC
TTAG back to topCoding sequence (CDS) from alignment at ch7:768335..769238+ >KJC3_009563-T1 ID=KJC3_009563-T1|Name=KJC3_009563-T1|organism=Aspergillus niger KJC3|type=CDS|length=1692bp|location=Sequence derived from alignment at ch7:768335..769238+ (Aspergillus niger KJC3)
ATGAGTCTCTTCATGCGAGCAAACGATGCTCTCAACGTCAACCCGATTGC
CGGCGTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTA
TCACAGCCATCTATATTGTATCATTCCTTGGCCTCCTGACAATGTCCTTC
TCCGGAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACCTTTCTCCT
ACTAGTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCTCGGCTGGA
GCGCTGTGGAACAAGTCAACAATCTCGACAACGGAGCAATACGCCAGATG
TTCTGGGCGAAATACATCAACTGGGTTGTTGCATTCCCTTCGCTCGCTCT
CGCACTCGGCCTCGTCTCAGGGGTTTCATGGACGACCATGATCTGCAATA
TCGCACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCGCATACACG
CCCTCAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTATCCTGGGT
GATTCTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGCGCAACGGC
TTGGGGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCAACCTGCTT
TGGTTGTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGGAATGTTAT
TGGGATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATATCCTCATGG
TGCCGCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATTGGGATTAT
CAGAAGTTGAGTATTGCCTTCAGTGATGCGAGGCCGAGCCGGGAGGCACA
GAGTTCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGCTTAGATGA
GTCTCTTCATGCGAGCAAACGATGCTCTCAACGTCAACCCGATTGCCGGC
GTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTATCAC
AGCCATCTATATTGTATCATTCCTTGGCCTCCTGACAATGTCCTTCTCCG
GAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACCTTTCTCCTACTA
GTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCTCGGCTGGAGCGC
TGTGGAACAAGTCAACAATCTCGACAACGGAGCAATACGCCAGATGTTCT
GGGCGAAATACATCAACTGGGTTGTTGCATTCCCTTCGCTCGCTCTCGCA
CTCGGCCTCGTCTCAGGGGTTTCATGGACGACCATGATCTGCAATATCGC
ACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCGCATACACGCCCT
CAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTATCCTGGGTGATT
CTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGCGCAACGGCTTGG
GGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCAACCTGCTTTGGT
TGTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGGAATGTTATTGGG
ATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATATCCTCATGGTGCC
GCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATTGGGATTATCAGA
AGTTGAGTATTGCCTTCAGTGATGCGAGGCCGAGCCGGGAGGCACAGAGT
TCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006811 | ion transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005216 | ion channel activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043476 |
| DBxref | InterPro:IPR001425 |
| DBxref | PFAM:PF01036 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:768335..769238 + |
|
