You are here

Home

KJC3_009565-T1, KJC3_009565-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009565-T1
Unique NameKJC3_009565-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:771166..772517-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009565-T1 ID=KJC3_009565-T1|Name=KJC3_009565-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch7:771166..772517- (Aspergillus niger KJC3)
TGACAATGTTTCTGAGGATATGTCCCACTATTTATTTTGCCCTCAGACCC
CACTATAATGTCCTGGATCACCTTTGGTAAGTAATCTATGGACCCATCCT
CCCCTACTTAATTCCATCCAAACAATGCTGATTAGGATTCTTTTGCGCTA
GCACCCTGGCAAACGCAGGACCAGACTGAGGACGAAAAGCCAACGCACAG
CCAATCATACAACCAGGAAAACGTAATCAGAGCCCCACAGTTAACTCTGT
TAGATGGCTTGGCAACCAAATCTAACCTTTAAAAGGCACAGTGCCGGTCA
ATGGGAAATTCATCATCTTCGTATTATAATGAGTCCAACAAAATACTCCT
GGCTATATATTCCTGTGGCCGAATACTTCATAGCACTGCATCTGCAGTTC
TGCCATCTTTCAGCTTTTTTGGGAGGAAATCGGTGAGATTTGCAATACCT
ACTACTTGTTATCTTCGCATCAGAAATGAAGTACTGAAACATTACTAGGA
GCAGCAGCGGGACGAGCCATCGCAACTGCAACATGATGAACAAATAGTGG
AGCAGTGCATTACTGATAAAAATGACTACGTATTAGTTCAGAACGATGAG
CTCTCTAAGGGACGCGAAGAACTAACAGAGTCGCTGAACTCTGCCTTATC
ACACGATTCGCAGCTATTGAAGGAGTTGGATCAGTGCGACTTTGTCTATG
ATGTCATGGCCGGTCCACCTGGAAAGAATCAGCTGCGTCGATGTATGATG
CTCAGCTTCCACGCAGATACTAACATTATATCGAAAGAGGCATATTTGAG
ACTCGGGACGAGCATCGAGCCTTATTTAGGGGCTCCTATCCCAGTTTTGG
GACTTCAAGATCGCAAGCCAGTTGGAACTGCAGAAGTGCAGTGGTCTTTT
TGTGGGCGCAGCAAGCCTTACCGGACAACGTTCTACGTTGTAGAAGAAGT
TGAGTACGACCTTCTCATCGGAAGACCTTCGATGCGGCAGCACGAGCTGT
ATAGAGTGGATCCCGCTATTGCGGAAAGGCTTCGTGATTCGTATCGACGT
CAGTAGGCTCAACTACTTAGTGGAGGATGGGCGGCGGGACTTAGAGCTTG
TCTGGACATCTTCTGGCCCACACGTCAATCCAGCTTGCCTTTCTATACGT
CGGAAGGAGTCCCCACAAATGTTCTATTGGTAGCCTGAGTGCAATTGTGT
CTTACAGATAGCCGGGCTCTGAATGTCAGGCATGTTCGGAATCCAGGGCA
AATGCCGGTTCGATATTGGCGTAATGTTACTCTTCCTATTTTGGTTGAGT
AGAATCGTAGAGACCCACTGTATGCCACACTACCCTATATGTAAGGCTGA
AG
back to top

Coding sequence (CDS) from alignment at ch7:771166..772517-

>KJC3_009565-T1 ID=KJC3_009565-T1|Name=KJC3_009565-T1|organism=Aspergillus niger KJC3|type=CDS|length=3156bp|location=Sequence derived from alignment at ch7:771166..772517- (Aspergillus niger KJC3)
GAGCAGCAGCGGGACGAGCCATCGCAACTGCAACATGATGAACAAATAGT
GGAGCAGTGCATTACTGATAAAAATGACTACGTATTAGTTCAGAACGATG
AGCTCTCTAAGGGACGCGAAGAACTAACAGAGTCGCTGAACTCTGCCTTA
TCACACGATTCGCAGCTATTGAAGGAGTTGGATCAGTGCGACTTTGTCTA
TGATGTCATGGCCGGTCCACCTGGAAAGAATCAGCTGCGTCGATGTATGA
TGCTCAGCTTCCACGCAGATACTAACATTATATCGAAAGAGGCATATTTG
AGACTCGGGACGAGCATCGAGCCTTATTTAGGGGCTCCTATCCCAGTTTT
GGGACTTCAAGATCGCAAGCCAGTTGGAACTGCAGAAGTGCAGTGGTCTT
TTTGTGGGCGCAGCAAGCCTTACCGGACAACGTTCTACGTTGTAGAAGAA
GTTGAGTACGACCTTCTCATCGGAAGACCTTCGATGCGGCAGCACGAGCT
GTATAGAGTGGATCCCGCTATTGCGGAAAGGCTTCGTGATTCGTATCGAC
GTCAGTAGTGCCGGTCAATGGGAAATTCATCATCTTCGTATTATAATGAG
TCCAACAAAATACTCCTGGCTATATATTCCTGTGGCCGAATACTTCATAG
CACTGCATCTGCAGTTCTGCCATCTTTCAGCTTTTTTGGGAGGAAATCGC
ACCCTGGCAAACGCAGGACCAGACTGAGGACGAAAAGCCAACGCACAGCC
AATCATACAACCAGGAAAACATGTCCTGGATCACCTTTGGAGCAGCAGCG
GGACGAGCCATCGCAACTGCAACATGATGAACAAATAGTGGAGCAGTGCA
TTACTGATAAAAATGACTACGTATTAGTTCAGAACGATGAGCTCTCTAAG
GGACGCGAAGAACTAACAGAGTCGCTGAACTCTGCCTTATCACACGATTC
GCAGCTATTGAAGGAGTTGGATCAGTGCGACTTTGTCTATGATGTCATGG
CCGGTCCACCTGGAAAGAATCAGCTGCGTCGATGTATGATGCTCAGCTTC
CACGCAGATACTAACATTATATCGAAAGAGGCATATTTGAGACTCGGGAC
GAGCATCGAGCCTTATTTAGGGGCTCCTATCCCAGTTTTGGGACTTCAAG
ATCGCAAGCCAGTTGGAACTGCAGAAGTGCAGTGGTCTTTTTGTGGGCGC
AGCAAGCCTTACCGGACAACGTTCTACGTTGTAGAAGAAGTTGAGTACGA
CCTTCTCATCGGAAGACCTTCGATGCGGCAGCACGAGCTGTATAGAGTGG
ATCCCGCTATTGCGGAAAGGCTTCGTGATTCGTATCGACGTCAGTAGTGC
CGGTCAATGGGAAATTCATCATCTTCGTATTATAATGAGTCCAACAAAAT
ACTCCTGGCTATATATTCCTGTGGCCGAATACTTCATAGCACTGCATCTG
CAGTTCTGCCATCTTTCAGCTTTTTTGGGAGGAAATCGCACCCTGGCAAA
CGCAGGACCAGACTGAGGACGAAAAGCCAACGCACAGCCAATCATACAAC
CAGGAAAACATGTCCTGGATCACCTTTGGAGCAGCAGCGGGACGAGCCAT
CGCAACTGCAACATGATGAACAAATAGTGGAGCAGTGCATTACTGATAAA
AATGACTACGTATTAGTTCAGAACGATGAGCTCTCTAAGGGACGCGAAGA
ACTAACAGAGTCGCTGAACTCTGCCTTATCACACGATTCGCAGCTATTGA
AGGAGTTGGATCAGTGCGACTTTGTCTATGATGTCATGGCCGGTCCACCT
GGAAAGAATCAGCTGCGTCGATGTATGATGCTCAGCTTCCACGCAGATAC
TAACATTATATCGAAAGAGGCATATTTGAGACTCGGGACGAGCATCGAGC
CTTATTTAGGGGCTCCTATCCCAGTTTTGGGACTTCAAGATCGCAAGCCA
GTTGGAACTGCAGAAGTGCAGTGGTCTTTTTGTGGGCGCAGCAAGCCTTA
CCGGACAACGTTCTACGTTGTAGAAGAAGTTGAGTACGACCTTCTCATCG
GAAGACCTTCGATGCGGCAGCACGAGCTGTATAGAGTGGATCCCGCTATT
GCGGAAAGGCTTCGTGATTCGTATCGACGTCAGTAGTGCCGGTCAATGGG
AAATTCATCATCTTCGTATTATAATGAGTCCAACAAAATACTCCTGGCTA
TATATTCCTGTGGCCGAATACTTCATAGCACTGCATCTGCAGTTCTGCCA
TCTTTCAGCTTTTTTGGGAGGAAATCGCACCCTGGCAAACGCAGGACCAG
ACTGAGGACGAAAAGCCAACGCACAGCCAATCATACAACCAGGAAAACAT
GTCCTGGATCACCTTTGGAGCAGCAGCGGGACGAGCCATCGCAACTGCAA
CATGATGAACAAATAGTGGAGCAGTGCATTACTGATAAAAATGACTACGT
ATTAGTTCAGAACGATGAGCTCTCTAAGGGACGCGAAGAACTAACAGAGT
CGCTGAACTCTGCCTTATCACACGATTCGCAGCTATTGAAGGAGTTGGAT
CAGTGCGACTTTGTCTATGATGTCATGGCCGGTCCACCTGGAAAGAATCA
GCTGCGTCGATGTATGATGCTCAGCTTCCACGCAGATACTAACATTATAT
CGAAAGAGGCATATTTGAGACTCGGGACGAGCATCGAGCCTTATTTAGGG
GCTCCTATCCCAGTTTTGGGACTTCAAGATCGCAAGCCAGTTGGAACTGC
AGAAGTGCAGTGGTCTTTTTGTGGGCGCAGCAAGCCTTACCGGACAACGT
TCTACGTTGTAGAAGAAGTTGAGTACGACCTTCTCATCGGAAGACCTTCG
ATGCGGCAGCACGAGCTGTATAGAGTGGATCCCGCTATTGCGGAAAGGCT
TCGTGATTCGTATCGACGTCAGTAGTGCCGGTCAATGGGAAATTCATCAT
CTTCGTATTATAATGAGTCCAACAAAATACTCCTGGCTATATATTCCTGT
GGCCGAATACTTCATAGCACTGCATCTGCAGTTCTGCCATCTTTCAGCTT
TTTTGGGAGGAAATCGCACCCTGGCAAACGCAGGACCAGACTGAGGACGA
AAAGCCAACGCACAGCCAATCATACAACCAGGAAAACATGTCCTGGATCA
CCTTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009565KJC3_009565Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009565-T1KJC3_009565-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009565-T1.cdsKJC3_009565-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009565-T1.utr3p1KJC3_009565-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009565-T1.exon4KJC3_009565-T1.exon4Aspergillus niger KJC3exon
KJC3_009565-T1.exon3KJC3_009565-T1.exon3Aspergillus niger KJC3exon
KJC3_009565-T1.exon2KJC3_009565-T1.exon2Aspergillus niger KJC3exon
KJC3_009565-T1.exon1KJC3_009565-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009565-T1.utr5p1KJC3_009565-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:771166..772517 -
Powered by Drupal