|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:784562..785442+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009571-T1 ID=KJC3_009571-T1|Name=KJC3_009571-T1|organism=Aspergillus niger KJC3|type=mRNA|length=881bp|location=Sequence derived from alignment at ch7:784562..785442+ (Aspergillus niger KJC3)
CTCTTCTCAAGATCATCACTTTATCCCAAAATCAACAAAATGTCCCACCT
CACCTACTACAACTACGAAGGAGTCGGAAAAAGGAACCAACAAACGTTCA
AATACAGCCAAGCCGTACGCATAGGTGATCGCATTGAATGTTCCGGCCAA
GGTATGTTCAAGAATTATTGTGTAATGTAAGTTCGAACATAGCATTAATT
ATAATCAGGTGGCTGGGACCCCAACACTGGTGAAATTTATAAAGAGATCA
ACGCGCAGATCGACCAAGCTTTCAAGAACGTCGAGCTGAACTTGAAGAAC
GCTGGCGGCAAAGGATGGGAGCAGGTCTTCCGCGTCAACTCGTACCATGT
CCCGATCAACAATGAAGCTTTGGATGCAATGGTCAGGAAATTCAAAAAGT
ATATGCCGAATCATGAGCCCCTGTGGACGTGTGTGGGCGTGACAAGGTTG
GGAGAGGATGATATGAGAGTTGAGATTGAGGTGGTCGCTCATGATCCGAA
ATAGATCTTTCGAGAGGTACTGGGGAGTAATGAAACCCGCACAGACCATA
GTTCCATCACGTTATAAATATAAAACTACCATGCACGGTCCCATGTGGCC
TGGTTCAACAAGTCAAAGTATCCGTAGTCGTCGGGTAGCTGGCTCCAAGG
GGCAAGATCAGTCCAGAGGATATTATGTAGCTCTGGAATAGCCTCATCAC
TAAAAGCGCCACATACTTCGGAAGGATTCTGCATAAGGTCCTGAATATCA
AGGTCAACCGCACTGATGTTACCACTCTCAGGTGACACGTCGCTAGGCAG
CATGGGACAAAGCTTTCTAAGCCCATTCGCAATATGTCGTGCGGGATGCC
ATGATCTAGAAAGTCCGTCAAGTACAGCCAG back to topCoding sequence (CDS) from alignment at ch7:784562..785442+ >KJC3_009571-T1 ID=KJC3_009571-T1|Name=KJC3_009571-T1|organism=Aspergillus niger KJC3|type=CDS|length=816bp|location=Sequence derived from alignment at ch7:784562..785442+ (Aspergillus niger KJC3)
ATGTCCCACCTCACCTACTACAACTACGAAGGAGTCGGAAAAAGGAACCA
ACAAACGTTCAAATACAGCCAAGCCGTACGCATAGGTGATCGCATTGAAT
GTTCCGGCCAAGGTGGCTGGGACCCCAACACTGGTGAAATTTATAAAGAG
ATCAACGCGCAGATCGACCAAGCTTTCAAGAACGTCGAGCTGAACTTGAA
GAACGCTGGCGGCAAAGGATGGGAGCAGGTCTTCCGCGTCAACTCGTACC
ATGTCCCGATCAACAATGAAGCTTTGGATGCAATGGTCAGGAAATTCAAA
AAGTATATGCCGAATCATGAGCCCCTGTGGACGTGTGTGGGCGTGACAAG
GTTGGGAGAGGATGATATGAGAGTTGAGATTGAGGTGGTCGCTCATGATC
CGAAATAGATGTCCCACCTCACCTACTACAACTACGAAGGAGTCGGAAAA
AGGAACCAACAAACGTTCAAATACAGCCAAGCCGTACGCATAGGTGATCG
CATTGAATGTTCCGGCCAAGGTGGCTGGGACCCCAACACTGGTGAAATTT
ATAAAGAGATCAACGCGCAGATCGACCAAGCTTTCAAGAACGTCGAGCTG
AACTTGAAGAACGCTGGCGGCAAAGGATGGGAGCAGGTCTTCCGCGTCAA
CTCGTACCATGTCCCGATCAACAATGAAGCTTTGGATGCAATGGTCAGGA
AATTCAAAAAGTATATGCCGAATCATGAGCCCCTGTGGACGTGTGTGGGC
GTGACAAGGTTGGGAGAGGATGATATGAGAGTTGAGATTGAGGTGGTCGC
TCATGATCCGAAATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009571-T1.utr5p1 | KJC3_009571-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009571-T1.utr3p1 | KJC3_009571-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.5 |
| DBxref | InterPro:IPR035959 |
| DBxref | InterPro:IPR006175 |
| DBxref | PFAM:PF01042 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:784562..785442 + |
|
