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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:831074..833721- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009585-T1 ID=KJC3_009585-T1|Name=KJC3_009585-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2648bp|location=Sequence derived from alignment at ch7:831074..833721- (Aspergillus niger KJC3)
CATCCTCGTCATCCCATCCCATCTTGTTTTGTCTCATCTCATCCATCCAT
CCTCTTCCTATTCTTTCGCTGTCCCACTACTCTATTTCCCCCCATCATTC
CCCATCTCGCCTGGCTGCGATTGCTTTCGTTTCCTCTGCCCCTCTGCCTT
CCGATCTACATACTCCGTACTGCCTCCTCATCTACTCGTCGCTACAATCC
CACCCCCAGCTGCCTGACTGCCTAACCGCCGATTAGCATCTCGCCCACTC
GTTCGACTGGCGACAATCTGCCTCCAACGCATCAGCATTGGCACCGCCAT
GGACCACGTTGGCTAGCCCTGGCTGCAATTCATATCATCGCTCGTTACCT
CATCCATCCAACGTCCTGCCTATTTTTACTTCTCCTTATCACGGACCACA
GAACGCTCACAACTCCTTCCCCCGTCGCCCGCTTCTTTTAGCCTCCCGTC
AATAGTATGTCTCGCAGCGCGCAGTCCCTCCCCCAAAATTTGATCCAGTG
CCTCGTTTTTAGACTTTGCTTTGCTTTTTCCTGCCTTGGGTCACAGGTAA
TTGAAATACTAACTTCCGACCCACCCGCAGCTCCTTGCTCTAACTAACGA
TTTACGAACTTTCCGACTCTTTCTTCCTGTTTGGCGCTTCCCGGTTCCGT
GCTTGCGACCTCGCTTTGAATGCCGTCTGAATTGATATTCTCCCCCTCAT
CGCCCCCCATGATTTCCACCATCCCCCCTCCCCGTCCGGTGTCGGTCAAT
TCACTGGCCAGAGCGTCGGCTTCCACTACCATTCCTTACGCCAAAGCGAG
TCGCTGCACCAGTGCCGAAATTCAGATTCTCGATGGTCCCATTAATCCCC
CGGCGGTGGGGCCTGGTCAGCTGGTCTGCCAGTCCCCGGTGGATACCGAA
ATGGAGGATGTGCGGATAAGCGTGGAGACGCCTCAGGCCTGCCGATCCGA
AGTGTGCTTCGAAGACCTTCCCATCGAGATCCACGAGGCCATTCTAGATC
ATCTGTTTGGCGAGCGGGCATCGGCATTCACCTCGTGCGCGCCCGGCAAG
TCTGCGCGCAGTTGGAATAAGTCATTGCGTCATCCCCGTCGAAAAACTCT
CTCCAATTTGGCATTGATCACCCCTGTCTGGCGAGCACTGGTGCAAGACC
GGATTTACAGGCACAGTGAGTGTTCTTCCCCACTTTACTAGTTTTGGTCC
CCCTCAAAGCCGCCATTTGTTTAAACTGGTCTAATTCACTGTCTAGTCAA
AATCAAAGGGACCACAGAAGAACTGGCAGAAAGTGCTCGTTGGTTTCGTG
CGCATCCCCATCTGGCCCCGTACGTCCGTCATGTCGAGATCTGGATCCCG
GTATGGGGGAAACGAGCCGTCAAGAACACATCACATCATTTCCCTGCCCG
GCGGTTGCATGATGAGGATGCCGGATTGGTCGAGCATGGTGCGCCCCAAG
CCATCGCGTGGGACGACTCCGACACCAACCATAGCACCGACTATCGGTAC
CACTATGCCAGCCACAATGCGACACTGGAGGAGATGTTCTTGCACGTAAA
ATCTGAATTTCCGGAAGCACGAATCCTTACCCTGGAGGGAGGTCACTGTA
AGCGACCGCCAATGGTACGCCAATTCCGCGATGATCCGTGCGGCCACTCC
GGACGGCGGCGTCTACCTACGCTGCCAGATGTCCAAACCTTTGTCATGCG
TGGAGCTTGGAATATCATGCGCGACTATCAACATTGGTTGAACATGTCCC
AAGCCTTACCAGGGGTGCGCGAGTGGCACTGCGCCTACGCCAAGCCTAAA
TTCGAGGCCTACGAGACTGTCGCGGAGATTCTGTCCCGGTTATCCCCAAC
TCTGGTCCATGTTAATATCAGCCTGGAAGGCTTCTACAACAAGGACAATA
CACAATCTGGCTGGATTCACGATGGAATCAGCCCACCACATCTCTGCCGC
CTGCTTGGCGAGGCAGCCCCGCGTCTGGAGTCCCTTGCATTTACCGGGAA
GGTCTGCGCCTGTCTCTTCAATGCAACCCGAAGTTTCATGTCCACCTGGC
CAGCCAAATCCAAACTCAAGTCCTTAGATTTGGTGGTCAAGACATGCTGT
CGCGAAAAGCGAACGAATCCGGGACTCGGATTTCTTGACGACTTCTCCGG
CATCACCAATCTGAATTTTATCCGCTCCTTTGAGAAACTTGTCCTCGGCG
CCGTCCACAGCCTGCAGCTGCACACTGCCCTGACGTACATGCGCATTCGG
TTCATCGACCTGGACTCCGCCTGTCCGCCACTGAATCCCTACTTCCAGCT
GTCCGACAACGAGTGCACCGGTCTATGGAATGAGCGGATTCTTGAGACCT
TGCACGAAGCCCGTCCCCAGGCACACTATGCAGAGCTTTCGGATGGCATC
TACCCCCAGTATGGACACAACCGGCAGATCGTAGGGGCCGTGTACCCGCG
AACTCGACCCTTAAGTATCCATGCATCGACATACAAAGTCATCGCCGATG
TATCCAAGCCATAACACGCTGATTGCCATTTGCTTGTAGTTTATGATGGG
CGGGATGAGCAGCAGCAAAAGTCTTACTATGTAGCCCATTTACTTATCTA
TGATACCTAGTCTTTCGAACAAATAATGCAATATTATATTCTTCTCTG back to topCoding sequence (CDS) from alignment at ch7:831074..833721- >KJC3_009585-T1 ID=KJC3_009585-T1|Name=KJC3_009585-T1|organism=Aspergillus niger KJC3|type=CDS|length=3528bp|location=Sequence derived from alignment at ch7:831074..833721- (Aspergillus niger KJC3)
TCAAAATCAAAGGGACCACAGAAGAACTGGCAGAAAGTGCTCGTTGGTTT
CGTGCGCATCCCCATCTGGCCCCGTACGTCCGTCATGTCGAGATCTGGAT
CCCGGTATGGGGGAAACGAGCCGTCAAGAACACATCACATCATTTCCCTG
CCCGGCGGTTGCATGATGAGGATGCCGGATTGGTCGAGCATGGTGCGCCC
CAAGCCATCGCGTGGGACGACTCCGACACCAACCATAGCACCGACTATCG
GTACCACTATGCCAGCCACAATGCGACACTGGAGGAGATGTTCTTGCACG
TAAAATCTGAATTTCCGGAAGCACGAATCCTTACCCTGGAGGGAGGTCAC
TGTAAGCGACCGCCAATGGTACGCCAATTCCGCGATGATCCGTGCGGCCA
CTCCGGACGGCGGCGTCTACCTACGCTGCCAGATGTCCAAACCTTTGTCA
TGCGTGGAGCTTGGAATATCATGCGCGACTATCAACATTGGTTGAACATG
TCCCAAGCCTTACCAGGGGTGCGCGAGTGGCACTGCGCCTACGCCAAGCC
TAAATTCGAGGCCTACGAGACTGTCGCGGAGATTCTGTCCCGGTTATCCC
CAACTCTGGTCCATGTTAATATCAGCCTGGAAGGCTTCTACAACAAGGAC
AATACACAATCTGGCTGGATTCACGATGGAATCAGCCCACCACATCTCTG
CCGCCTGCTTGGCGAGGCAGCCCCGCGTCTGGAGTCCCTTGCATTTACCG
GGAAGGTCTGCGCCTGTCTCTTCAATGCAACCCGAAGTTTCATGTCCACC
TGGCCAGCCAAATCCAAACTCAAGTCCTTAGATTTGGTGGTCAAGACATG
CTGTCGCGAAAAGCGAACGAATCCGGGACTCGGATTTCTTGACGACTTCT
CCGGCATCACCAATCTGAATTTTATCCGCTCCTTTGAGAAACTTGTCCTC
GGCGCCGTCCACAGCCTGCAGCTGCACACTGCCCTGACGTACATGCGCAT
TCGGTTCATCGACCTGGACTCCGCCTGTCCGCCACTGAATCCCTACTTCC
AGCTGTCCGACAACGAGTGCACCGGTCTATGGAATGAGCGGATTCTTGAG
ACCTTGCACGAAGCCCGTCCCCAGGCACACTATGCAGAGCTTTCGGATGG
CATCTACCCCCAGTATGGACACAACCGGCAGATCGTAGGGGCCGTGTACC
CGCGAACTCGACCCTTAAGTATCCATGCATCGACATACAAAGTCATCGCC
GATGTATCCAAGCCATAAATGCCGTCTGAATTGATATTCTCCCCCTCATC
GCCCCCCATGATTTCCACCATCCCCCCTCCCCGTCCGGTGTCGGTCAATT
CACTGGCCAGAGCGTCGGCTTCCACTACCATTCCTTACGCCAAAGCGAGT
CGCTGCACCAGTGCCGAAATTCAGATTCTCGATGGTCCCATTAATCCCCC
GGCGGTGGGGCCTGGTCAGCTGGTCTGCCAGTCCCCGGTGGATACCGAAA
TGGAGGATGTGCGGATAAGCGTGGAGACGCCTCAGGCCTGCCGATCCGAA
GTGTGCTTCGAAGACCTTCCCATCGAGATCCACGAGGCCATTCTAGATCA
TCTGTTTGGCGAGCGGGCATCGGCATTCACCTCGTGCGCGCCCGGCAAGT
CTGCGCGCAGTTGGAATAAGTCATTGCGTCATCCCCGTCGAAAAACTCTC
TCCAATTTGGCATTGATCACCCCTGTCTGGCGAGCACTGGTGCAAGACCG
GATTTACAGGCACATCAAAATCAAAGGGACCACAGAAGAACTGGCAGAAA
GTGCTCGTTGGTTTCGTGCGCATCCCCATCTGGCCCCGTACGTCCGTCAT
GTCGAGATCTGGATCCCGGTATGGGGGAAACGAGCCGTCAAGAACACATC
ACATCATTTCCCTGCCCGGCGGTTGCATGATGAGGATGCCGGATTGGTCG
AGCATGGTGCGCCCCAAGCCATCGCGTGGGACGACTCCGACACCAACCAT
AGCACCGACTATCGGTACCACTATGCCAGCCACAATGCGACACTGGAGGA
GATGTTCTTGCACGTAAAATCTGAATTTCCGGAAGCACGAATCCTTACCC
TGGAGGGAGGTCACTGTAAGCGACCGCCAATGGTACGCCAATTCCGCGAT
GATCCGTGCGGCCACTCCGGACGGCGGCGTCTACCTACGCTGCCAGATGT
CCAAACCTTTGTCATGCGTGGAGCTTGGAATATCATGCGCGACTATCAAC
ATTGGTTGAACATGTCCCAAGCCTTACCAGGGGTGCGCGAGTGGCACTGC
GCCTACGCCAAGCCTAAATTCGAGGCCTACGAGACTGTCGCGGAGATTCT
GTCCCGGTTATCCCCAACTCTGGTCCATGTTAATATCAGCCTGGAAGGCT
TCTACAACAAGGACAATACACAATCTGGCTGGATTCACGATGGAATCAGC
CCACCACATCTCTGCCGCCTGCTTGGCGAGGCAGCCCCGCGTCTGGAGTC
CCTTGCATTTACCGGGAAGGTCTGCGCCTGTCTCTTCAATGCAACCCGAA
GTTTCATGTCCACCTGGCCAGCCAAATCCAAACTCAAGTCCTTAGATTTG
GTGGTCAAGACATGCTGTCGCGAAAAGCGAACGAATCCGGGACTCGGATT
TCTTGACGACTTCTCCGGCATCACCAATCTGAATTTTATCCGCTCCTTTG
AGAAACTTGTCCTCGGCGCCGTCCACAGCCTGCAGCTGCACACTGCCCTG
ACGTACATGCGCATTCGGTTCATCGACCTGGACTCCGCCTGTCCGCCACT
GAATCCCTACTTCCAGCTGTCCGACAACGAGTGCACCGGTCTATGGAATG
AGCGGATTCTTGAGACCTTGCACGAAGCCCGTCCCCAGGCACACTATGCA
GAGCTTTCGGATGGCATCTACCCCCAGTATGGACACAACCGGCAGATCGT
AGGGGCCGTGTACCCGCGAACTCGACCCTTAAGTATCCATGCATCGACAT
ACAAAGTCATCGCCGATGTATCCAAGCCATAAATGCCGTCTGAATTGATA
TTCTCCCCCTCATCGCCCCCCATGATTTCCACCATCCCCCCTCCCCGTCC
GGTGTCGGTCAATTCACTGGCCAGAGCGTCGGCTTCCACTACCATTCCTT
ACGCCAAAGCGAGTCGCTGCACCAGTGCCGAAATTCAGATTCTCGATGGT
CCCATTAATCCCCCGGCGGTGGGGCCTGGTCAGCTGGTCTGCCAGTCCCC
GGTGGATACCGAAATGGAGGATGTGCGGATAAGCGTGGAGACGCCTCAGG
CCTGCCGATCCGAAGTGTGCTTCGAAGACCTTCCCATCGAGATCCACGAG
GCCATTCTAGATCATCTGTTTGGCGAGCGGGCATCGGCATTCACCTCGTG
CGCGCCCGGCAAGTCTGCGCGCAGTTGGAATAAGTCATTGCGTCATCCCC
GTCGAAAAACTCTCTCCAATTTGGCATTGATCACCCCTGTCTGGCGAGCA
CTGGTGCAAGACCGGATTTACAGGCACA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009585-T1.utr3p1 | KJC3_009585-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:831074..833721 - |
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