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KJC3_009587-T1, KJC3_009587-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009587-T1
Unique NameKJC3_009587-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:837192..839053+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009587-T1 ID=KJC3_009587-T1|Name=KJC3_009587-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1862bp|location=Sequence derived from alignment at ch7:837192..839053+ (Aspergillus niger KJC3)
ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAA
TGCGGAGTCTGTCGAGGACTATGAAACCTTGAAATATCAACTGCTCGGAC
CGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTGAGC
AGTATGCCACAACGTTCTAGGATGATAGCTAAGGTTAGCAGGTCTCGGAG
ATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCATGAGCAAAA
CCGAGACAAGGTCTTGACAGTCAAGATTGAACGCATCCTGAAAGAGAAAG
CCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGACCAG
CTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCATGTTGTTCA
CGTCGACTGTGATGCTTTCTTTGCTGCAGTGGAAGAGCTCGACCGTCCAG
AATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACCTGC
AACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGCATCATTCGT
GGCGAAGAAACTGTGTCCTCAGCTGATCTGTTTGCCTCAGAACTACGAAA
AGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTATGAT
CCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAATCTGACTGC
ATATTGTACCGAAAATGAGCTTGATCCCGAGGAGGCGGTCCAGCGCATGC
GGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATTGCA
GCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAAGCCGAACGG
CCAATTTTGCGTACCTAACGAGAGAGAAGCGATCATGAAGTTCATGGAGG
AGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGTGAA
CTTGATGCGATCGGTATTAAATCATGCGGCGACATTTATCCGCAGCGTGC
CATTTTGACCAAGTTATTCGGAGAAAAAGCGTTTCATTTCTTGGTGCAAT
GCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTATGAG
CGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGGGAATAAAGA
GGAGTTCAGAGCCAAGCTGTGGTCGATAGCCGAGGAGCTTGAGAAAGATC
TGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAGCTC
GCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACGGGCGGTCTC
GACTGCCAAAGATCTGTATGCGTTCTCACTTCCGATGCTGGAGAAGCTTG
AAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGCACC
AACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGGCTTCACTTC
GCGGCCGAAGCCTGCTTCAGACACGTCGACCGATCCTCCGGTTGAGCAGG
AGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTACAA
GAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATCCGAGGCCGC
AGAATTGAAGCAGGATGGGAAAGGAGTAGATGCATCGCAGCCTGTATATT
GGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACATTC
AATGACCATGTGGACTACTGCCTATCACGACAGACGATCAAGGAGGCTGT
CCAAGGTGCCTCGAGTGATGTTCCGCCTGAGCCTCTGGCTGCATCGAAGA
CACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGGTTG
TTCTTTTCGTGA
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Coding sequence (CDS) from alignment at ch7:837192..839053+

>KJC3_009587-T1 ID=KJC3_009587-T1|Name=KJC3_009587-T1|organism=Aspergillus niger KJC3|type=CDS|length=3630bp|location=Sequence derived from alignment at ch7:837192..839053+ (Aspergillus niger KJC3)
ATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGCAAAGGCGTCCAGCAA
TGCGGAGTCTGTCGAGGACTATGAAACCTTGAAATATCAACTGCTCGGAC
CGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGACCAGCGAAAGGTCTCG
GAGATTATTTATAATGCCTCCAAAGGATCCAAATTCTTCAATCATGAGCA
AAACCGAGACAAGGTCTTGACAGTCAAGATTGAACGCATCCTGAAAGAGA
AAGCCCGTCTCGAGAAACTAGATCTGTCGGCTGATCTGCGACGCGCTGAC
CAGCTTCTTGCTGAGCTAGAACTGACGCGAGATCTGTCGCAGCATGTTGT
TCACGTCGACTGTGATGCTTTCTTTGCTGCAGTGGAAGAGCTCGACCGTC
CAGAATTGAAGACTGTCCCTATGGCGGTCGGCAAGGGCGTGCTGACGACC
TGCAACTATGAGGCACGAAAGTTTGGCTGTCGGAGCGGCATGGCATCATT
CGTGGCGAAGAAACTGTGTCCTCAGCTGATCTGTTTGCCTCAGAACTACG
AAAAGTATACTGCAAAGGCAAAGGAGATCCGCGCCATTTTCGCACAGTAT
GATCCTACATTTGAGAGCGCTAGTATTGACGAGGCTTATCTCAATCTGAC
TGCATATTGTACCGAAAATGAGCTTGATCCCGAGGAGGCGGTCCAGCGCA
TGCGGGCAGAGGTCTTGGAAAAGACCAAGATTTCAGTTTCTGCTGGCATT
GCAGCAAATGCAAAAATAGCCAAGATCGCATCCAACAAGAATAAGCCGAA
CGGCCAATTTTGCGTACCTAACGAGAGAGAAGCGATCATGAAGTTCATGG
AGGAGCTACCCGTCCGCAAGGTGAACGGTGTTGGTCGCGTCTTCGAACGT
GAACTTGATGCGATCGGTATTAAATCATGCGGCGACATTTATCCGCAGCG
TGCCATTTTGACCAAGTTATTCGGAGAAAAAGCGTTTCATTTCTTGGTGC
AATGCTACCTCGGCTTAGGTAGAACGAAAATCCAGCCGGTGGAGAACTAT
GAGCGCAAGAGTGTGGGAACTGAGAGGACGTTCCACGAGATCGGGAATAA
AGAGGAGTTCAGAGCCAAGCTGTGGTCGATAGCCGAGGAGCTTGAGAAAG
ATCTGGCGCGAACTGAGTTCAAGGGGCGGACACTGGTTCTCAAAGTAAAG
CTCGCTACATTTGAGGTGTTGTCACGACAATGCCAGCCTCCACGGGCGGT
CTCGACTGCCAAAGATCTGTATGCGTTCTCACTTCCGATGCTGGAGAAGC
TTGAAAAGGAAATGCCTGATCTGAAAATGCGCCTGCTTGGTCTCCGGTGC
ACCAACCTTGTGAGCACAAAGAAAGTTGGGATCGAGCTCTTCGGCTTCAC
TTCGCGGCCGAAGCCTGCTTCAGACACGTCGACCGATCCTCCGGTTGAGC
AGGAGATCGAGACAGAGGAGGCCTTTGAGAAAGCGGCACGGGAGGAACTA
CAAGAGGAGCTCGATGATTTGGAGAAGCTGAGCCAGGAGGTATCCGAGGC
CGCAGAATTGAAGCAGGATGGGAAAGGAGTAGATGCATCGCAGCCTGTAT
ATTGGGATTGCCCGATTTGTTCTCGACCTCAGGTGGCGGAAGATCGTACA
TTCAATGACCATGTGGACTACTGCCTATCACGACAGACGATCAAGGAGGC
TGTCCAAGGTGCCTCGAGTGATGTTCCGCCTGAGCCTCTGGCTGCATCGA
AGACACGAAAGCGAAGAGCGACGGAATCACCGGATCCGCGACAAAAACGG
TTGTTCTTTTCGTGAATGGAGCCTTCGGGCGAGGAGCCGAATGATGATGC
AAAGGCGTCCAGCAATGCGGAGTCTGTCGAGGACTATGAAACCTTGAAAT
ATCAACTGCTCGGACCGTCTTTGACCAAAGCGGGTCAGGATGCCGTGGAC
CAGCGAAAGGTCTCGGAGATTATTTATAATGCCTCCAAAGGATCCAAATT
CTTCAATCATGAGCAAAACCGAGACAAGGTCTTGACAGTCAAGATTGAAC
GCATCCTGAAAGAGAAAGCCCGTCTCGAGAAACTAGATCTGTCGGCTGAT
CTGCGACGCGCTGACCAGCTTCTTGCTGAGCTAGAACTGACGCGAGATCT
GTCGCAGCATGTTGTTCACGTCGACTGTGATGCTTTCTTTGCTGCAGTGG
AAGAGCTCGACCGTCCAGAATTGAAGACTGTCCCTATGGCGGTCGGCAAG
GGCGTGCTGACGACCTGCAACTATGAGGCACGAAAGTTTGGCTGTCGGAG
CGGCATGGCATCATTCGTGGCGAAGAAACTGTGTCCTCAGCTGATCTGTT
TGCCTCAGAACTACGAAAAGTATACTGCAAAGGCAAAGGAGATCCGCGCC
ATTTTCGCACAGTATGATCCTACATTTGAGAGCGCTAGTATTGACGAGGC
TTATCTCAATCTGACTGCATATTGTACCGAAAATGAGCTTGATCCCGAGG
AGGCGGTCCAGCGCATGCGGGCAGAGGTCTTGGAAAAGACCAAGATTTCA
GTTTCTGCTGGCATTGCAGCAAATGCAAAAATAGCCAAGATCGCATCCAA
CAAGAATAAGCCGAACGGCCAATTTTGCGTACCTAACGAGAGAGAAGCGA
TCATGAAGTTCATGGAGGAGCTACCCGTCCGCAAGGTGAACGGTGTTGGT
CGCGTCTTCGAACGTGAACTTGATGCGATCGGTATTAAATCATGCGGCGA
CATTTATCCGCAGCGTGCCATTTTGACCAAGTTATTCGGAGAAAAAGCGT
TTCATTTCTTGGTGCAATGCTACCTCGGCTTAGGTAGAACGAAAATCCAG
CCGGTGGAGAACTATGAGCGCAAGAGTGTGGGAACTGAGAGGACGTTCCA
CGAGATCGGGAATAAAGAGGAGTTCAGAGCCAAGCTGTGGTCGATAGCCG
AGGAGCTTGAGAAAGATCTGGCGCGAACTGAGTTCAAGGGGCGGACACTG
GTTCTCAAAGTAAAGCTCGCTACATTTGAGGTGTTGTCACGACAATGCCA
GCCTCCACGGGCGGTCTCGACTGCCAAAGATCTGTATGCGTTCTCACTTC
CGATGCTGGAGAAGCTTGAAAAGGAAATGCCTGATCTGAAAATGCGCCTG
CTTGGTCTCCGGTGCACCAACCTTGTGAGCACAAAGAAAGTTGGGATCGA
GCTCTTCGGCTTCACTTCGCGGCCGAAGCCTGCTTCAGACACGTCGACCG
ATCCTCCGGTTGAGCAGGAGATCGAGACAGAGGAGGCCTTTGAGAAAGCG
GCACGGGAGGAACTACAAGAGGAGCTCGATGATTTGGAGAAGCTGAGCCA
GGAGGTATCCGAGGCCGCAGAATTGAAGCAGGATGGGAAAGGAGTAGATG
CATCGCAGCCTGTATATTGGGATTGCCCGATTTGTTCTCGACCTCAGGTG
GCGGAAGATCGTACATTCAATGACCATGTGGACTACTGCCTATCACGACA
GACGATCAAGGAGGCTGTCCAAGGTGCCTCGAGTGATGTTCCGCCTGAGC
CTCTGGCTGCATCGAAGACACGAAAGCGAAGAGCGACGGAATCACCGGAT
CCGCGACAAAAACGGTTGTTCTTTTCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0003684damaged DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009587KJC3_009587Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009587-T1.exon1KJC3_009587-T1.exon1Aspergillus niger KJC3exon
KJC3_009587-T1.exon2KJC3_009587-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009587-T1.cdsKJC3_009587-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009587-T1KJC3_009587-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR043502
DBxrefInterPro:IPR022880
DBxrefInterPro:IPR001126
DBxrefInterPro:IPR036775
DBxrefInterPro:IPR024728
DBxrefInterPro:IPR043128
DBxrefInterPro:IPR017961
DBxrefPFAM:PF11798
DBxrefPFAM:PF11799
DBxrefPFAM:PF00817
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:837192..839053 +
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