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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:845668..847767- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009590-T1 ID=KJC3_009590-T1|Name=KJC3_009590-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2100bp|location=Sequence derived from alignment at ch7:845668..847767- (Aspergillus niger KJC3) GTGGAATGTGACCACTTGCTAACCATACGTGACAACCGCACTGGCTGCCT
GCCCGCCTCAGGCCATTCCCCCATTGCAAGTGACTGTCTGTCTCTCTCCC
CGCCATGACGGAAGAAATCCAGCGGAAAACTAAAAGCCAAAATAACATCG
TTTAGGCAGAAAAAATCACAGGAGACACATCTGATCCTGTTGTCGCTACC
AGCACATCCTATTCCCGATCACCTTCTATTTCTGTCACACGCCTGCCGGC
TGGCCTTGATTTTTCTGCATCGGTGACCGCTAGATTGATTGCGTGGTTGG
GTCCTGCTCACATCGCCCGCCATGGTTGCCGACACTTCCTACTACGACGC
CCTCGGGGTGCCGCCCACCGCGACCGAACTCGAGATCAAGAAGGCTTACC
GCAAACTGGCCATTATCCACCATCCGGGTGCGTGGCACGCTGTCCTCTGG
TTGACCACTACTGATCGTCGTAGATAAGAACCCCGGTGATGAGACTGCGC
ATGCGCGATTCCAGGAGGTGGGTAGATACTGTTTGTTTGTCTGCTCTCAA
AATCATGCGCTCACACACACTCTCTACTATGACAGATCGGTGAAGCCTAT
CAGGTTCTGAGCGATGAAGAACTTCGCAAGCGCTACGATAAGTTTGGAAA
GGAGGATGCTGTTCCCGGTGGAGGTTTTGGTAAGACATTGCATCTCGCAG
GCAATCAGTCGGATACTAATGCCCTACAGAGGACCCCTCGGAGTTCTTTG
GCATGATCTTCGGTGGCAACGCCTTTGTCGACCTCATCGGTGAAATCTCG
CTCATGAAGGACCTCACCACTACGATGGACATCACCATGCAGCAGATGGA
GGAGGAAGAACTGGCCGCATCCGCTGAGGAGAAGCTCAACATCCACGACG
AGACCCAGGCGCACGCTGCTGAAGGCACTACCGAAGGTGCTGCCCAAGCT
ACCCCCGCCGAGTCGACGACCGCCGCTTCCGAGAAGCCCGCTGCCGCCGC
ATCCCCGAGCTCCGGCACGAGCACCCCCCGCCGCTACATGGGCCAACAGG
CCATCATGGACAAGTCGGAGGAAGAGGCGCGCATGGAGGCAGCTGGTCTG
TCCCAGGAGGAGAAGGAGCTGCGCAAGAAGGAGAAGAAGAAGGGTGGTTT
GTCCCGAGAGCAACAGGAGCGTCTGGCGGCGTACGAGTTGGAGCGCAAGA
AGGCGCGCGAGGAGCGGGTCAACACTCTGGCCACGAAGTTGGTGGACAAG
ATCAGCGTGTGGACGGAAACCGACAAGAGCCCTGATATGACCCGCGCGTT
CAAGGAGAAGATCCGGCTGGAGGTGGAGAACCTGAAGATGGAGTCGTTCG
GTTTGGAGATCTTGCACGCCATCGGCGCCACCTATGTGCAGAAGGCCACC
TCTTTCCTGAAGTCGCAGAAGTTCCTGGGTATTTCCGGATTCTTCTCGCG
GCTGAAGGACAAGGGCACGCTGGCCAAGGAGACCTGGACCACCATTTCCA
CTGCCATTGATGCGCAGATGACCATGGAGGAGATGGCTAAGCTGGAGGAG
CGCGGTGGCGAGGACTGGACGGATGAGAAGAAGGCCGAGTACGAGAAGAA
GGTGACGGGCAAGATCTTGGCGGCAGCATGGCGGGGCAGCAAGTTTGAGA
TCCAGAGCGTGCTGCGTGATGTGTGCGACCAGGTGCTCGGAGACAAGCGC
ATCAAGCTGGACAAGCGCGTTGAGCGTGCTCATGCTCTGGTGATTGCGGG
TAACATTTACTCCAAGGTATGTTCACCGTTCACTACAATGGGATTCACTA
CAGGGGTTGGATGTATGCTAACTGGTATAGGCTGAGCGCGATCCTGATGA
GGAGGGTGACTTCATGGCGTTCGAGCAGCTGATGGCGGAGTCGATGACGA
AGAAGGGTAAGGAGGACAAGAAGAAGAAGAAGAAGCACGAGCACCACCAC
GAAGAGCCCACAGCCACTGCCTAGATACCTTGCATAGTCTATTTTTGTTT
TTGTGGTTCAGACTGGACATTGGATATATGTTGAGTAGCGACCCGGCATA
CCCTGCCAGATGCGTAATAGATGTAAGCAGAATGAATATCAATTAGATTC
back to topCoding sequence (CDS) from alignment at ch7:845668..847767- >KJC3_009590-T1 ID=KJC3_009590-T1|Name=KJC3_009590-T1|organism=Aspergillus niger KJC3|type=CDS|length=7125bp|location=Sequence derived from alignment at ch7:845668..847767- (Aspergillus niger KJC3) GCTGAGCGCGATCCTGATGAGGAGGGTGACTTCATGGCGTTCGAGCAGCT GATGGCGGAGTCGATGACGAAGAAGGGTAAGGAGGACAAGAAGAAGAAGA AGAAGCACGAGCACCACCACGAAGAGCCCACAGCCACTGCCTAGAGGACC CCTCGGAGTTCTTTGGCATGATCTTCGGTGGCAACGCCTTTGTCGACCTC ATCGGTGAAATCTCGCTCATGAAGGACCTCACCACTACGATGGACATCAC CATGCAGCAGATGGAGGAGGAAGAACTGGCCGCATCCGCTGAGGAGAAGC TCAACATCCACGACGAGACCCAGGCGCACGCTGCTGAAGGCACTACCGAA GGTGCTGCCCAAGCTACCCCCGCCGAGTCGACGACCGCCGCTTCCGAGAA GCCCGCTGCCGCCGCATCCCCGAGCTCCGGCACGAGCACCCCCCGCCGCT ACATGGGCCAACAGGCCATCATGGACAAGTCGGAGGAAGAGGCGCGCATG GAGGCAGCTGGTCTGTCCCAGGAGGAGAAGGAGCTGCGCAAGAAGGAGAA GAAGAAGGGTGGTTTGTCCCGAGAGCAACAGGAGCGTCTGGCGGCGTACG AGTTGGAGCGCAAGAAGGCGCGCGAGGAGCGGGTCAACACTCTGGCCACG AAGTTGGTGGACAAGATCAGCGTGTGGACGGAAACCGACAAGAGCCCTGA TATGACCCGCGCGTTCAAGGAGAAGATCCGGCTGGAGGTGGAGAACCTGA AGATGGAGTCGTTCGGTTTGGAGATCTTGCACGCCATCGGCGCCACCTAT GTGCAGAAGGCCACCTCTTTCCTGAAGTCGCAGAAGTTCCTGGGTATTTC CGGATTCTTCTCGCGGCTGAAGGACAAGGGCACGCTGGCCAAGGAGACCT GGACCACCATTTCCACTGCCATTGATGCGCAGATGACCATGGAGGAGATG GCTAAGCTGGAGGAGCGCGGTGGCGAGGACTGGACGGATGAGAAGAAGGC CGAGTACGAGAAGAAGGTGACGGGCAAGATCTTGGCGGCAGCATGGCGGG GCAGCAAGTTTGAGATCCAGAGCGTGCTGCGTGATGTGTGCGACCAGGTG CTCGGAGACAAGCGCATCAAGCTGGACAAGCGCGTTGAGCGTGCTCATGC TCTGGTGATTGCGGGTAACATTTACTCCAAGATCGGTGAAGCCTATCAGG TTCTGAGCGATGAAGAACTTCGCAAGCGCTACGATAAGTTTGGAAAGGAG GATGCTGTTCCCGGTGGAGGTTTTGATAAGAACCCCGGTGATGAGACTGC GCATGCGCGATTCCAGGAGATGGTTGCCGACACTTCCTACTACGACGCCC TCGGGGTGCCGCCCACCGCGACCGAACTCGAGATCAAGAAGGCTTACCGC AAACTGGCCATTATCCACCATCCGGGCTGAGCGCGATCCTGATGAGGAGG GTGACTTCATGGCGTTCGAGCAGCTGATGGCGGAGTCGATGACGAAGAAG GGTAAGGAGGACAAGAAGAAGAAGAAGAAGCACGAGCACCACCACGAAGA GCCCACAGCCACTGCCTAGAGGACCCCTCGGAGTTCTTTGGCATGATCTT CGGTGGCAACGCCTTTGTCGACCTCATCGGTGAAATCTCGCTCATGAAGG ACCTCACCACTACGATGGACATCACCATGCAGCAGATGGAGGAGGAAGAA CTGGCCGCATCCGCTGAGGAGAAGCTCAACATCCACGACGAGACCCAGGC GCACGCTGCTGAAGGCACTACCGAAGGTGCTGCCCAAGCTACCCCCGCCG AGTCGACGACCGCCGCTTCCGAGAAGCCCGCTGCCGCCGCATCCCCGAGC TCCGGCACGAGCACCCCCCGCCGCTACATGGGCCAACAGGCCATCATGGA CAAGTCGGAGGAAGAGGCGCGCATGGAGGCAGCTGGTCTGTCCCAGGAGG AGAAGGAGCTGCGCAAGAAGGAGAAGAAGAAGGGTGGTTTGTCCCGAGAG CAACAGGAGCGTCTGGCGGCGTACGAGTTGGAGCGCAAGAAGGCGCGCGA GGAGCGGGTCAACACTCTGGCCACGAAGTTGGTGGACAAGATCAGCGTGT GGACGGAAACCGACAAGAGCCCTGATATGACCCGCGCGTTCAAGGAGAAG ATCCGGCTGGAGGTGGAGAACCTGAAGATGGAGTCGTTCGGTTTGGAGAT CTTGCACGCCATCGGCGCCACCTATGTGCAGAAGGCCACCTCTTTCCTGA AGTCGCAGAAGTTCCTGGGTATTTCCGGATTCTTCTCGCGGCTGAAGGAC AAGGGCACGCTGGCCAAGGAGACCTGGACCACCATTTCCACTGCCATTGA TGCGCAGATGACCATGGAGGAGATGGCTAAGCTGGAGGAGCGCGGTGGCG AGGACTGGACGGATGAGAAGAAGGCCGAGTACGAGAAGAAGGTGACGGGC AAGATCTTGGCGGCAGCATGGCGGGGCAGCAAGTTTGAGATCCAGAGCGT GCTGCGTGATGTGTGCGACCAGGTGCTCGGAGACAAGCGCATCAAGCTGG ACAAGCGCGTTGAGCGTGCTCATGCTCTGGTGATTGCGGGTAACATTTAC TCCAAGATCGGTGAAGCCTATCAGGTTCTGAGCGATGAAGAACTTCGCAA GCGCTACGATAAGTTTGGAAAGGAGGATGCTGTTCCCGGTGGAGGTTTTG ATAAGAACCCCGGTGATGAGACTGCGCATGCGCGATTCCAGGAGATGGTT GCCGACACTTCCTACTACGACGCCCTCGGGGTGCCGCCCACCGCGACCGA ACTCGAGATCAAGAAGGCTTACCGCAAACTGGCCATTATCCACCATCCGG GCTGAGCGCGATCCTGATGAGGAGGGTGACTTCATGGCGTTCGAGCAGCT GATGGCGGAGTCGATGACGAAGAAGGGTAAGGAGGACAAGAAGAAGAAGA AGAAGCACGAGCACCACCACGAAGAGCCCACAGCCACTGCCTAGAGGACC CCTCGGAGTTCTTTGGCATGATCTTCGGTGGCAACGCCTTTGTCGACCTC ATCGGTGAAATCTCGCTCATGAAGGACCTCACCACTACGATGGACATCAC CATGCAGCAGATGGAGGAGGAAGAACTGGCCGCATCCGCTGAGGAGAAGC TCAACATCCACGACGAGACCCAGGCGCACGCTGCTGAAGGCACTACCGAA GGTGCTGCCCAAGCTACCCCCGCCGAGTCGACGACCGCCGCTTCCGAGAA GCCCGCTGCCGCCGCATCCCCGAGCTCCGGCACGAGCACCCCCCGCCGCT ACATGGGCCAACAGGCCATCATGGACAAGTCGGAGGAAGAGGCGCGCATG GAGGCAGCTGGTCTGTCCCAGGAGGAGAAGGAGCTGCGCAAGAAGGAGAA GAAGAAGGGTGGTTTGTCCCGAGAGCAACAGGAGCGTCTGGCGGCGTACG AGTTGGAGCGCAAGAAGGCGCGCGAGGAGCGGGTCAACACTCTGGCCACG AAGTTGGTGGACAAGATCAGCGTGTGGACGGAAACCGACAAGAGCCCTGA TATGACCCGCGCGTTCAAGGAGAAGATCCGGCTGGAGGTGGAGAACCTGA AGATGGAGTCGTTCGGTTTGGAGATCTTGCACGCCATCGGCGCCACCTAT GTGCAGAAGGCCACCTCTTTCCTGAAGTCGCAGAAGTTCCTGGGTATTTC CGGATTCTTCTCGCGGCTGAAGGACAAGGGCACGCTGGCCAAGGAGACCT GGACCACCATTTCCACTGCCATTGATGCGCAGATGACCATGGAGGAGATG GCTAAGCTGGAGGAGCGCGGTGGCGAGGACTGGACGGATGAGAAGAAGGC CGAGTACGAGAAGAAGGTGACGGGCAAGATCTTGGCGGCAGCATGGCGGG GCAGCAAGTTTGAGATCCAGAGCGTGCTGCGTGATGTGTGCGACCAGGTG CTCGGAGACAAGCGCATCAAGCTGGACAAGCGCGTTGAGCGTGCTCATGC TCTGGTGATTGCGGGTAACATTTACTCCAAGATCGGTGAAGCCTATCAGG TTCTGAGCGATGAAGAACTTCGCAAGCGCTACGATAAGTTTGGAAAGGAG GATGCTGTTCCCGGTGGAGGTTTTGATAAGAACCCCGGTGATGAGACTGC GCATGCGCGATTCCAGGAGATGGTTGCCGACACTTCCTACTACGACGCCC TCGGGGTGCCGCCCACCGCGACCGAACTCGAGATCAAGAAGGCTTACCGC AAACTGGCCATTATCCACCATCCGGGCTGAGCGCGATCCTGATGAGGAGG GTGACTTCATGGCGTTCGAGCAGCTGATGGCGGAGTCGATGACGAAGAAG GGTAAGGAGGACAAGAAGAAGAAGAAGAAGCACGAGCACCACCACGAAGA GCCCACAGCCACTGCCTAGAGGACCCCTCGGAGTTCTTTGGCATGATCTT CGGTGGCAACGCCTTTGTCGACCTCATCGGTGAAATCTCGCTCATGAAGG ACCTCACCACTACGATGGACATCACCATGCAGCAGATGGAGGAGGAAGAA CTGGCCGCATCCGCTGAGGAGAAGCTCAACATCCACGACGAGACCCAGGC GCACGCTGCTGAAGGCACTACCGAAGGTGCTGCCCAAGCTACCCCCGCCG AGTCGACGACCGCCGCTTCCGAGAAGCCCGCTGCCGCCGCATCCCCGAGC TCCGGCACGAGCACCCCCCGCCGCTACATGGGCCAACAGGCCATCATGGA CAAGTCGGAGGAAGAGGCGCGCATGGAGGCAGCTGGTCTGTCCCAGGAGG AGAAGGAGCTGCGCAAGAAGGAGAAGAAGAAGGGTGGTTTGTCCCGAGAG CAACAGGAGCGTCTGGCGGCGTACGAGTTGGAGCGCAAGAAGGCGCGCGA GGAGCGGGTCAACACTCTGGCCACGAAGTTGGTGGACAAGATCAGCGTGT GGACGGAAACCGACAAGAGCCCTGATATGACCCGCGCGTTCAAGGAGAAG ATCCGGCTGGAGGTGGAGAACCTGAAGATGGAGTCGTTCGGTTTGGAGAT CTTGCACGCCATCGGCGCCACCTATGTGCAGAAGGCCACCTCTTTCCTGA AGTCGCAGAAGTTCCTGGGTATTTCCGGATTCTTCTCGCGGCTGAAGGAC AAGGGCACGCTGGCCAAGGAGACCTGGACCACCATTTCCACTGCCATTGA TGCGCAGATGACCATGGAGGAGATGGCTAAGCTGGAGGAGCGCGGTGGCG AGGACTGGACGGATGAGAAGAAGGCCGAGTACGAGAAGAAGGTGACGGGC AAGATCTTGGCGGCAGCATGGCGGGGCAGCAAGTTTGAGATCCAGAGCGT GCTGCGTGATGTGTGCGACCAGGTGCTCGGAGACAAGCGCATCAAGCTGG ACAAGCGCGTTGAGCGTGCTCATGCTCTGGTGATTGCGGGTAACATTTAC TCCAAGATCGGTGAAGCCTATCAGGTTCTGAGCGATGAAGAACTTCGCAA GCGCTACGATAAGTTTGGAAAGGAGGATGCTGTTCCCGGTGGAGGTTTTG ATAAGAACCCCGGTGATGAGACTGCGCATGCGCGATTCCAGGAGATGGTT GCCGACACTTCCTACTACGACGCCCTCGGGGTGCCGCCCACCGCGACCGA ACTCGAGATCAAGAAGGCTTACCGCAAACTGGCCATTATCCACCATCCGG GCTGAGCGCGATCCTGATGAGGAGGGTGACTTCATGGCGTTCGAGCAGCT GATGGCGGAGTCGATGACGAAGAAGGGTAAGGAGGACAAGAAGAAGAAGA AGAAGCACGAGCACCACCACGAAGAGCCCACAGCCACTGCCTAGAGGACC CCTCGGAGTTCTTTGGCATGATCTTCGGTGGCAACGCCTTTGTCGACCTC ATCGGTGAAATCTCGCTCATGAAGGACCTCACCACTACGATGGACATCAC CATGCAGCAGATGGAGGAGGAAGAACTGGCCGCATCCGCTGAGGAGAAGC TCAACATCCACGACGAGACCCAGGCGCACGCTGCTGAAGGCACTACCGAA GGTGCTGCCCAAGCTACCCCCGCCGAGTCGACGACCGCCGCTTCCGAGAA GCCCGCTGCCGCCGCATCCCCGAGCTCCGGCACGAGCACCCCCCGCCGCT ACATGGGCCAACAGGCCATCATGGACAAGTCGGAGGAAGAGGCGCGCATG GAGGCAGCTGGTCTGTCCCAGGAGGAGAAGGAGCTGCGCAAGAAGGAGAA GAAGAAGGGTGGTTTGTCCCGAGAGCAACAGGAGCGTCTGGCGGCGTACG AGTTGGAGCGCAAGAAGGCGCGCGAGGAGCGGGTCAACACTCTGGCCACG AAGTTGGTGGACAAGATCAGCGTGTGGACGGAAACCGACAAGAGCCCTGA TATGACCCGCGCGTTCAAGGAGAAGATCCGGCTGGAGGTGGAGAACCTGA AGATGGAGTCGTTCGGTTTGGAGATCTTGCACGCCATCGGCGCCACCTAT GTGCAGAAGGCCACCTCTTTCCTGAAGTCGCAGAAGTTCCTGGGTATTTC CGGATTCTTCTCGCGGCTGAAGGACAAGGGCACGCTGGCCAAGGAGACCT GGACCACCATTTCCACTGCCATTGATGCGCAGATGACCATGGAGGAGATG GCTAAGCTGGAGGAGCGCGGTGGCGAGGACTGGACGGATGAGAAGAAGGC CGAGTACGAGAAGAAGGTGACGGGCAAGATCTTGGCGGCAGCATGGCGGG GCAGCAAGTTTGAGATCCAGAGCGTGCTGCGTGATGTGTGCGACCAGGTG CTCGGAGACAAGCGCATCAAGCTGGACAAGCGCGTTGAGCGTGCTCATGC TCTGGTGATTGCGGGTAACATTTACTCCAAGATCGGTGAAGCCTATCAGG TTCTGAGCGATGAAGAACTTCGCAAGCGCTACGATAAGTTTGGAAAGGAG GATGCTGTTCCCGGTGGAGGTTTTGATAAGAACCCCGGTGATGAGACTGC GCATGCGCGATTCCAGGAGATGGTTGCCGACACTTCCTACTACGACGCCC TCGGGGTGCCGCCCACCGCGACCGAACTCGAGATCAAGAAGGCTTACCGC AAACTGGCCATTATCCACCATCCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009590-T1.utr3p1 | KJC3_009590-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009590-T1.utr5p1 | KJC3_009590-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.6 |
DBxref | InterPro:IPR018253 |
DBxref | InterPro:IPR036869 |
DBxref | InterPro:IPR026894 |
DBxref | InterPro:IPR001623 |
DBxref | PFAM:PF14308 |
DBxref | PFAM:PF00226 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:845668..847767 - |
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