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KJC3_009596-T1, KJC3_009596-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009596-T1
Unique NameKJC3_009596-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:864989..866572-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009596-T1 ID=KJC3_009596-T1|Name=KJC3_009596-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1584bp|location=Sequence derived from alignment at ch7:864989..866572- (Aspergillus niger KJC3)
ATCAAAATCCCCGTGTCCCCATCATCGTCCATCTACTTAGCTTGTTTAAA
ACGGAAAAGAAAACATGGAAAATGATTGGTAAAAAGAATTCTCACCCCTC
ATAGCCTACTTGTGGAACAAGTAGATCCTCACCCATTAAACAGAGAACAA
CCCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGC
TCCAATTCTACGACGTCTATTCCCTAGATGACCCATCACAGCTTACACAC
ATCCCCCGACCTGCTCTGACACTCTTAGTCATTATCCCACTTACACCAGC
CTGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACC
CTGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATC
GGCCATGCTTGCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCC
GGCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACC
TCGCCATACCGCTGGATATGAACAAACGCGCTAAAATGCTCTATAACAAT
GAAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGA
TGCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCA
AGAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTG
AAGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCT
TGATATGGGCATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTA
GTCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCATAGGGAATGCCT
GGATGGGAAATTGATATACTGTGATGGCCGCGTTCTGCAATCTTATTGGT
GGAGAAGTCTAGTCTCTGCTCTATGTGATGACTAATAGGAACCTCGGCTG
TCCGTGGCTCCACAGGCAAAGTCAGCTAGCGCAAGCGAGGACCCACCGCG
CAGGTATAAAAGGCGGCTTCCCCCCCGAAAATTTTGGAAATCAAGCGACT
CTACGTTAGTTTCCCTACCCCCTACATTGGGCTTCAGAATCATTTGCTAA
CCACCTTTTTGCCTACAGTTCAAAGAATCACTTTAGAGTAGACGTCCCAC
CTCTGAGCTCTTCTAAAGAGCCACAGAATCTCCACCCTTGCTGATGACTG
CTATGTCCTCGATGCCCTAAAGTGAAGCCGTTTTACTTCCGACTCGACCT
TGCATTTGCACGCTCTGTTACAATCTGTTTTCGGATAGACTTGTTTCGGG
TGTCGGTGTGATGGTCCAGGGAGTGGTGATGATCTTTACCTTGTCATGAT
GTCTTGACTTCGGTCGGTCGGACTTGGTGGGTGTCGAGGAGGTCTGAAAG
GTGTTTTCCTTCTATCTCTGTTTTCTTCACTTGTTTATTTTACAATCAAG
TATGAAAATAAAAATGGAAAAATTCGAAAATCAAAAACTCGATAGAATTT
TCTCGATATAATTCCCATTGGCTTTGTCTACGATGGTCTCTCCACCTGTC
ACCCACGCACCTGACCACAACAATAAGAAACCCG
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Coding sequence (CDS) from alignment at ch7:864989..866572-

>KJC3_009596-T1 ID=KJC3_009596-T1|Name=KJC3_009596-T1|organism=Aspergillus niger KJC3|type=CDS|length=1410bp|location=Sequence derived from alignment at ch7:864989..866572- (Aspergillus niger KJC3)
AGAACAACCCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCCTATCT
CCGGAGCTCCAATTCTACGACGTCTATTCCCTAGATGACCCATCACAGCT
TACACACATCCCCCGACCTGCTCTGACACTCTTAGTCATTATCCCACTTA
CACCAGCCTGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAGAAGAA
CCCTACCCTGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTCAAGCA
GACCATCGGCCATGCTTGCGGATCGATCGGGCTATTACATAGTGTGATCA
ACGGTCCGGCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGACGATA
CGGAACCTCGCCATACCGCTGGATATGAACAAACGCGCTAAAATGCTCTA
TAACAATGAAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGACGGGCG
AAAGCGATGCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCGTTAGT
TTCGTCAAGAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGG
GCCTCTGAAGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAGTCCGC
GGGCGCTTGATATGGGCATCAGGAGGATCATCAAGCTGAATGCGGATGAA
GGGGGTAGTCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCATAGAT
GATTGAGAACAACCCCGACGTCATGAACCAACTAGCAGCAAAGCTAGGCC
TATCTCCGGAGCTCCAATTCTACGACGTCTATTCCCTAGATGACCCATCA
CAGCTTACACACATCCCCCGACCTGCTCTGACACTCTTAGTCATTATCCC
ACTTACACCAGCCTGGGACCAAAGCCGCAAGGCCGAAGACGCTAACAAAG
AAGAACCCTACCCTGGCTCCGGCCGTCCTGACGAGCCAGTCATCTGGTTC
AAGCAGACCATCGGCCATGCTTGCGGATCGATCGGGCTATTACATAGTGT
GATCAACGGTCCGGCTGTCGACTTCATCACACCTGGGTCCGATCTTGAGA
CGATACGGAACCTCGCCATACCGCTGGATATGAACAAACGCGCTAAAATG
CTCTATAACAATGAAGCGTTTGAAGTTGCTCATAAGTCAGTTGAGCAGAC
GGGCGAAAGCGATGCCAATCTAATGGATGAGCGTGATGGTGGGCATTTCG
TTAGTTTCGTCAAGAGCGGCGGGAAGCTCTGGGAGCTGGAGGGGTCGAGG
AAGGGGCCTCTGAAGAGGGGAGACCTTGCTGAGAATGAGGATGTTCTTAG
TCCGCGGGCGCTTGATATGGGCATCAGGAGGATCATCAAGCTGAATGCGG
ATGAAGGGGGTAGTCTGCTTTTTAGTTGCATTGCTCTGGCGCGTAAGGCA
TAGATGATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009596KJC3_009596Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009596-T1KJC3_009596-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009596-T1.cdsKJC3_009596-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009596-T1.utr3p2KJC3_009596-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_009596-T1.utr3p1KJC3_009596-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009596-T1.exon3KJC3_009596-T1.exon3Aspergillus niger KJC3exon
KJC3_009596-T1.exon2KJC3_009596-T1.exon2Aspergillus niger KJC3exon
KJC3_009596-T1.exon1KJC3_009596-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009596-T1.utr5p1KJC3_009596-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0000836
DBxrefInterPro:IPR038765
DBxrefInterPro:IPR036959
DBxrefInterPro:IPR001578
DBxrefPFAM:PF01088
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:864989..866572 -
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