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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:887221..889292+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009602-T1 ID=KJC3_009602-T1|Name=KJC3_009602-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2072bp|location=Sequence derived from alignment at ch7:887221..889292+ (Aspergillus niger KJC3)
CCACTACTTAAGGCTTTGACCCGAGGACAAATGTTCGGAAACGTCGCGAG
GCCGCCGATATCTGCCTCCCATCTTTCGCTCCGTAACACTGAAGCCTCGC
CTTCTGTCGTGTAATAGCGTCTCCGCTCAAGTGGGTCCTCGAAAATCTGG
CCGCCATTGGCACGGAACAAGCAGCTGCAGATGTCACTGCAGGAGATCGT
GGCCTGGACGGATAACTATTCTATCAGCATCAAGCTTATGGCTTTCTTAG
TCTACCAGCAATCATTGCTTCGGCCTGTTGTACCTAGGTAGGCCCCGCGC
ATTGCGCGACGCGGAAAGCCAATTGTGTTTTTGTCTGGTGGCCGCCGGGA
ATGACCGCCTCTCCGACATGGTTGGTTCTCTCCTAAGGTATCAATGATCC
TTGGGGCTGGTGAGTCGTTCCTGATCTTTAGTTCGCCTTCGTCCTTGTGG
CGCTTGTCTTGTCTAGTGTGACCTCATTCGTCTCGAATTTTGTCATGTAG
TCTAGGTCAGCGGGGAGCGCGGCCGCATTTAGCGGCAGGCGGAGCCGCCA
CAACGACTGTATCTCCAATTAAGGTTCGGCAATCCAAGGTTGATTAGCAG
GTGAGCTCTCCAGGTGCAACATAAAAGGAGCTGTCTCAACCGTCGTCTCC
CACCACAATTGGGCATCTTCTGATTGATATCTCTCACCTCCGCACCCACT
ATCTACCAGACACGATGAGTCTTAACCTTTCAATGAGATGCAGCACTGTT
CTGCCTAATAAGGCAACGTTGACTGAGAAGAACTTGCCGGACCAGAGTGG
CAAGGTGTGCATCCGCGTCAAGATTCTTTCCCTTCCCGACCAGTTAGCTG
ATGTCTAGAACAGGTGTTCCTTGTAACAGGCGCCTCCGGGGGGCTCGGTA
GACTCCTCACCAACATCCTGTACCAGCATAATGGCAAGGTTTACCTTGCC
GCCCGGTCCGAGACGAAAACTAAGGAGGCAATTGAGGAGATAAAGGCAGC
CCATCCATCCTCCAAGGGCGAACTGCTATTTCTCAACCTTCAACTCGATG
ACTTGACCACTATCAAGCGGGCCACTAATGAGTTCCTGGCCAAGGAGGAT
CGTTTGGATGTCCTGTGGAACAATGCTGGTGTTATGATCCCACCCGCAGG
CTCTCAAACAAAGCAGGGCTATGAGCTCCAGTACGGGGTCAACAATATCG
GCCACTTCTTGCTTACTCACTTTCTTCGCCCGGCCCTCGAGACGGCGGCA
AAGTCAGCACCCAAAAATTCAGTCCGCGTCATTTGGGTTTCCTCGAGTGC
TGCCGATTCTGCACCAAATCCGGCCATCGATCTGACCAATATGGATTACC
ACAGAGAGGAGGGGGCTTGGGTGAAGTACTGTCGCAGCAAAGCGGCTTCC
GTTGTTCATTCGGCGGAGTTTGCCCGAAGAACTAAGGGTACCGGCATTAT
TAGCTTGGTCAGTATATCACGCTTTATACTTTGGCAAGCTTCATTGGTCC
TGACTGCGAGCTCAGGCTCTTAACCCCGGGAATTTCGTGACGAATCTCCA
GCAAAATATGTCCAAAATGGAGCTCATGATGTTTGTAAGTTCCCAAATCC
GCTGTCACGCATTCTTTGCCCCTATACTAAACTAAATCCAATTGTAGAAA
CTCATCGCATCGGAGCCGATCAATGGCGCCTATACCGAATTGTTCGCAGG
TCTCAGTGACACTATTACGGAGGAGGAGAACGGAGGATGGGGTGCGACAC
CCATGCATATATCCCTGTCTTCCAGGAATATCCTGACCCGCTAACCTGTT
CTCGTTAGTTTCGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGACTTGG
TGGACTCAACCCTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAACAGGTG
AAACCTTACTTGTAAGGATGTGAAGTAATTGCCATTATCAACAAAAATCC
ATAGGAGAATTCCAGGACATCTTCAAATTTACTTTGGTTCGCAGGCATAG
TTTAGCCAGCCCACCGCGTTCTTAAGAACTTCCCCCGTCAAACCCCCACA
TAACCACTCCAACTCAAAAGTC back to topCoding sequence (CDS) from alignment at ch7:887221..889292+ >KJC3_009602-T1 ID=KJC3_009602-T1|Name=KJC3_009602-T1|organism=Aspergillus niger KJC3|type=CDS|length=4770bp|location=Sequence derived from alignment at ch7:887221..889292+ (Aspergillus niger KJC3)
ATGAGTCTTAACCTTTCAATGAGATGCAGCACTGTTCTGCCTAATAAGGC
AACGTTGACTGAGAAGAACTTGCCGGACCAGAGTGGCAAGGTGTTCCTTG
TAACAGGCGCCTCCGGGGGGCTCGGTAGACTCCTCACCAACATCCTGTAC
CAGCATAATGGCAAGGTTTACCTTGCCGCCCGGTCCGAGACGAAAACTAA
GGAGGCAATTGAGGAGATAAAGGCAGCCCATCCATCCTCCAAGGGCGAAC
TGCTATTTCTCAACCTTCAACTCGATGACTTGACCACTATCAAGCGGGCC
ACTAATGAGTTCCTGGCCAAGGAGGATCGTTTGGATGTCCTGTGGAACAA
TGCTGGTGTTATGATCCCACCCGCAGGCTCTCAAACAAAGCAGGGCTATG
AGCTCCAGTACGGGGTCAACAATATCGGCCACTTCTTGCTTACTCACTTT
CTTCGCCCGGCCCTCGAGACGGCGGCAAAGTCAGCACCCAAAAATTCAGT
CCGCGTCATTTGGGTTTCCTCGAGTGCTGCCGATTCTGCACCAAATCCGG
CCATCGATCTGACCAATATGGATTACCACAGAGAGGAGGGGGCTTGGGTG
AAGTACTGTCGCAGCAAAGCGGCTTCCGTTGTTCATTCGGCGGAGTTTGC
CCGAAGAACTAAGGGTACCGGCATTATTAGCTTGGCTCTTAACCCCGGGA
ATTTCGTGACGAATCTCCAGCAAAATATGTCCAAAATGGAGCTCATGATG
TTTAAACTCATCGCATCGGAGCCGATCAATGGCGCCTATACCGAATTGTT
CGCAGGTCTCAGTGACACTATTACGGAGGAGGAGAACGGAGGATGGGTTT
CGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGACTTGGTGGACTCAACC
CTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAACAGGTGAAACCTTACTT
GTAAATGAGTCTTAACCTTTCAATGAGATGCAGCACTGTTCTGCCTAATA
AGGCAACGTTGACTGAGAAGAACTTGCCGGACCAGAGTGGCAAGGTGTTC
CTTGTAACAGGCGCCTCCGGGGGGCTCGGTAGACTCCTCACCAACATCCT
GTACCAGCATAATGGCAAGGTTTACCTTGCCGCCCGGTCCGAGACGAAAA
CTAAGGAGGCAATTGAGGAGATAAAGGCAGCCCATCCATCCTCCAAGGGC
GAACTGCTATTTCTCAACCTTCAACTCGATGACTTGACCACTATCAAGCG
GGCCACTAATGAGTTCCTGGCCAAGGAGGATCGTTTGGATGTCCTGTGGA
ACAATGCTGGTGTTATGATCCCACCCGCAGGCTCTCAAACAAAGCAGGGC
TATGAGCTCCAGTACGGGGTCAACAATATCGGCCACTTCTTGCTTACTCA
CTTTCTTCGCCCGGCCCTCGAGACGGCGGCAAAGTCAGCACCCAAAAATT
CAGTCCGCGTCATTTGGGTTTCCTCGAGTGCTGCCGATTCTGCACCAAAT
CCGGCCATCGATCTGACCAATATGGATTACCACAGAGAGGAGGGGGCTTG
GGTGAAGTACTGTCGCAGCAAAGCGGCTTCCGTTGTTCATTCGGCGGAGT
TTGCCCGAAGAACTAAGGGTACCGGCATTATTAGCTTGGCTCTTAACCCC
GGGAATTTCGTGACGAATCTCCAGCAAAATATGTCCAAAATGGAGCTCAT
GATGTTTAAACTCATCGCATCGGAGCCGATCAATGGCGCCTATACCGAAT
TGTTCGCAGGTCTCAGTGACACTATTACGGAGGAGGAGAACGGAGGATGG
GTTTCGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGACTTGGTGGACTC
AACCCTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAACAGGTGAAACCTT
ACTTGTAAATGAGTCTTAACCTTTCAATGAGATGCAGCACTGTTCTGCCT
AATAAGGCAACGTTGACTGAGAAGAACTTGCCGGACCAGAGTGGCAAGGT
GTTCCTTGTAACAGGCGCCTCCGGGGGGCTCGGTAGACTCCTCACCAACA
TCCTGTACCAGCATAATGGCAAGGTTTACCTTGCCGCCCGGTCCGAGACG
AAAACTAAGGAGGCAATTGAGGAGATAAAGGCAGCCCATCCATCCTCCAA
GGGCGAACTGCTATTTCTCAACCTTCAACTCGATGACTTGACCACTATCA
AGCGGGCCACTAATGAGTTCCTGGCCAAGGAGGATCGTTTGGATGTCCTG
TGGAACAATGCTGGTGTTATGATCCCACCCGCAGGCTCTCAAACAAAGCA
GGGCTATGAGCTCCAGTACGGGGTCAACAATATCGGCCACTTCTTGCTTA
CTCACTTTCTTCGCCCGGCCCTCGAGACGGCGGCAAAGTCAGCACCCAAA
AATTCAGTCCGCGTCATTTGGGTTTCCTCGAGTGCTGCCGATTCTGCACC
AAATCCGGCCATCGATCTGACCAATATGGATTACCACAGAGAGGAGGGGG
CTTGGGTGAAGTACTGTCGCAGCAAAGCGGCTTCCGTTGTTCATTCGGCG
GAGTTTGCCCGAAGAACTAAGGGTACCGGCATTATTAGCTTGGCTCTTAA
CCCCGGGAATTTCGTGACGAATCTCCAGCAAAATATGTCCAAAATGGAGC
TCATGATGTTTAAACTCATCGCATCGGAGCCGATCAATGGCGCCTATACC
GAATTGTTCGCAGGTCTCAGTGACACTATTACGGAGGAGGAGAACGGAGG
ATGGGTTTCGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGACTTGGTGG
ACTCAACCCTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAACAGGTGAAA
CCTTACTTGTAAATGAGTCTTAACCTTTCAATGAGATGCAGCACTGTTCT
GCCTAATAAGGCAACGTTGACTGAGAAGAACTTGCCGGACCAGAGTGGCA
AGGTGTTCCTTGTAACAGGCGCCTCCGGGGGGCTCGGTAGACTCCTCACC
AACATCCTGTACCAGCATAATGGCAAGGTTTACCTTGCCGCCCGGTCCGA
GACGAAAACTAAGGAGGCAATTGAGGAGATAAAGGCAGCCCATCCATCCT
CCAAGGGCGAACTGCTATTTCTCAACCTTCAACTCGATGACTTGACCACT
ATCAAGCGGGCCACTAATGAGTTCCTGGCCAAGGAGGATCGTTTGGATGT
CCTGTGGAACAATGCTGGTGTTATGATCCCACCCGCAGGCTCTCAAACAA
AGCAGGGCTATGAGCTCCAGTACGGGGTCAACAATATCGGCCACTTCTTG
CTTACTCACTTTCTTCGCCCGGCCCTCGAGACGGCGGCAAAGTCAGCACC
CAAAAATTCAGTCCGCGTCATTTGGGTTTCCTCGAGTGCTGCCGATTCTG
CACCAAATCCGGCCATCGATCTGACCAATATGGATTACCACAGAGAGGAG
GGGGCTTGGGTGAAGTACTGTCGCAGCAAAGCGGCTTCCGTTGTTCATTC
GGCGGAGTTTGCCCGAAGAACTAAGGGTACCGGCATTATTAGCTTGGCTC
TTAACCCCGGGAATTTCGTGACGAATCTCCAGCAAAATATGTCCAAAATG
GAGCTCATGATGTTTAAACTCATCGCATCGGAGCCGATCAATGGCGCCTA
TACCGAATTGTTCGCAGGTCTCAGTGACACTATTACGGAGGAGGAGAACG
GAGGATGGGTTTCGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGACTTG
GTGGACTCAACCCTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAACAGGT
GAAACCTTACTTGTAAATGAGTCTTAACCTTTCAATGAGATGCAGCACTG
TTCTGCCTAATAAGGCAACGTTGACTGAGAAGAACTTGCCGGACCAGAGT
GGCAAGGTGTTCCTTGTAACAGGCGCCTCCGGGGGGCTCGGTAGACTCCT
CACCAACATCCTGTACCAGCATAATGGCAAGGTTTACCTTGCCGCCCGGT
CCGAGACGAAAACTAAGGAGGCAATTGAGGAGATAAAGGCAGCCCATCCA
TCCTCCAAGGGCGAACTGCTATTTCTCAACCTTCAACTCGATGACTTGAC
CACTATCAAGCGGGCCACTAATGAGTTCCTGGCCAAGGAGGATCGTTTGG
ATGTCCTGTGGAACAATGCTGGTGTTATGATCCCACCCGCAGGCTCTCAA
ACAAAGCAGGGCTATGAGCTCCAGTACGGGGTCAACAATATCGGCCACTT
CTTGCTTACTCACTTTCTTCGCCCGGCCCTCGAGACGGCGGCAAAGTCAG
CACCCAAAAATTCAGTCCGCGTCATTTGGGTTTCCTCGAGTGCTGCCGAT
TCTGCACCAAATCCGGCCATCGATCTGACCAATATGGATTACCACAGAGA
GGAGGGGGCTTGGGTGAAGTACTGTCGCAGCAAAGCGGCTTCCGTTGTTC
ATTCGGCGGAGTTTGCCCGAAGAACTAAGGGTACCGGCATTATTAGCTTG
GCTCTTAACCCCGGGAATTTCGTGACGAATCTCCAGCAAAATATGTCCAA
AATGGAGCTCATGATGTTTAAACTCATCGCATCGGAGCCGATCAATGGCG
CCTATACCGAATTGTTCGCAGGTCTCAGTGACACTATTACGGAGGAGGAG
AACGGAGGATGGGTTTCGCCTTTCGGAAAGGTTGAAAAAGTCCGGAAGGA
CTTGGTGGACTCAACCCTCGGAGAAAAGTTCTGGGACTGGAGTTTGGAAC
AGGTGAAACCTTACTTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009602-T1.utr3p1 | KJC3_009602-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:887221..889292 + |
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