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KJC3_009603-T1, KJC3_009603-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009603-T1
Unique NameKJC3_009603-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:889723..891735-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009603-T1 ID=KJC3_009603-T1|Name=KJC3_009603-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2013bp|location=Sequence derived from alignment at ch7:889723..891735- (Aspergillus niger KJC3)
TGTAGGGTCTGGAAGCTTATTGTTTTTATGTTTTATTATTTCACTCTTTT
GAAAGGAGTTATTGGCCAATATTGACCTTCATGGATCGCTCTCAGAATAT
AGCCTCCCACGCATGTGTCGCTTGTAAAAGACAAAAACGGAGATGCGACA
AACTGCTGCCCCAGTGCAGCCTGTGCTTCCGCACCAGCCGCACCTGCGAC
TATGCTGATACACCAAAGTCGCCTCCGACTGCGGCCGACCTCGCAACCCT
TCAAGCAAGATTGACCGAACTGGAAGAAAGACTTAGTAGCGCCTCTGCGT
CAGACTCTCTGTCTGCTACAGCCGGCGTTTCGCGCACAGATAGCCTTGCC
ACCGAATCTATTGCATACGACCGAGAACCCACCAGCTTTCCGTCAGCCTT
GTTTTTGGATATAGACTGCTATAAATGGTCCAATATGCAACTCCCAAGGC
CGGCTGCCAGCATTCCGATGGTGGGTAGCAAATTATCGCTACTTTGTTCC
TGCCATTTGCCCTAGAATCTTGCTGCTGATTAATATCCAGGACATACTCA
CCATTCTCAACCAGCAAAATTTCATATTGGGAACAACTTCGCTTTACTTC
GATACGATCCATCCGTGGATGCCGATCATTTCAAAAAAGCGACTGGACCT
CGGCATTTCACTGAAGGACGGTGGACCGGACATCGCGCTGCTTTTCCTCG
CGATGAAGTTAAACACCCTCCCTCCGCCACCTGGCAGCGAGATACACGGT
GCAATTTATTCGTCTGCCAAAAGATTCTTGGCGACCTTGGAAGCCAGTGG
CGCGGTGTCATTTGGCTACCTACAGGCCATGACTTTGATAGCCGTGTACG
AATACAGTCACTCGATCTATCCTGCGGCGTGGATGACCGTAGGAGCATGC
GCCCGACTCGCTGAGCTTCTTGGTATTTCACCTGGTAAAGACACGATGAA
AATTATGCGTCCCGCTGTATGTCGATGAATGATTGAAGAAGACGTAGGAG
AAAATCACTGAGTATTTGACAACAGATGACCTGGACAGAACTAGAGGAGA
GAAGACGGGTATGGTGGGCCATTTACATCTTGGATCGCACTATCTCCCTC
GGCAGCCGGAGGAGGTTCTGCTTCCCAGATCCGGCGGATACAGATGTCCT
CCCTGTGGATGATGATACATGGGTGAGTACACTCCTGCGCCTTATCTTGT
ATATCAGATCTCGACTGATATTGTCTCCAATAGGATCTGGGTGATGTAGC
CAACATCATACATTATCCAGTCACAACACCCTTTTTCACCCCTGCCTCGC
CTTTCTCTCGCCTCTGTCAGTCGGCAATGTTCATTAGCCGTGCCACCGTG
TGTCGAAGCGAATCGACGCAGACAGGCCTTGCAGACCATATGACCGCTGT
TGTCAGCCTTACCGAGGACCTGAGCACCTTCAGCTCTATTCTTGCCGAAG
AGATGGACTCTTCCTCCACGGACGGATATCTACGACTACTTGCTCCTCAG
TGCCTGACGTGGTCGGCCCTCTTCCTGCTACTCGATAATTATTGCTGCCC
AGAAAAACTTAGCAATGAACCAGGTTACACCACATCCGGCAACACTAAAG
GACCGGACGAACTCGCCGCCCAGATCCAGGCCACGCTGGTAGTGCGGAAT
ATCAGCGACCAGGCCCACAGACAAACTACGAACGTCATGGATATTATATC
TAACCAGCTACGTAGCGACCAAATGGGGAAATTAAGCCCGTTCCTACTGG
ATGCGCTGTACTGCTCCATGGTGACGTTCCAATGGATCTATCGCGAAGGC
GGTGACGAGAAAGCCAAAGGCAAACTAGCTGATATAGAGGCTTGCATGGG
GATATTGAGTGGACGGTGGAAGTTGGCGTCAGAATACATTGCTCTCAATG
GAATTTATCGCGACGGAGGGAACACCTAAGGACCAATCCAAAAATCACCA
TTCGTACTCCAATTTCAGTACGCTACTATTGGCTATCTACGGCAGTAAAT
AGAAATCTTCTAT
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Coding sequence (CDS) from alignment at ch7:889723..891735-

>KJC3_009603-T1 ID=KJC3_009603-T1|Name=KJC3_009603-T1|organism=Aspergillus niger KJC3|type=CDS|length=6636bp|location=Sequence derived from alignment at ch7:889723..891735- (Aspergillus niger KJC3)
GATCTGGGTGATGTAGCCAACATCATACATTATCCAGTCACAACACCCTT
TTTCACCCCTGCCTCGCCTTTCTCTCGCCTCTGTCAGTCGGCAATGTTCA
TTAGCCGTGCCACCGTGTGTCGAAGCGAATCGACGCAGACAGGCCTTGCA
GACCATATGACCGCTGTTGTCAGCCTTACCGAGGACCTGAGCACCTTCAG
CTCTATTCTTGCCGAAGAGATGGACTCTTCCTCCACGGACGGATATCTAC
GACTACTTGCTCCTCAGTGCCTGACGTGGTCGGCCCTCTTCCTGCTACTC
GATAATTATTGCTGCCCAGAAAAACTTAGCAATGAACCAGGTTACACCAC
ATCCGGCAACACTAAAGGACCGGACGAACTCGCCGCCCAGATCCAGGCCA
CGCTGGTAGTGCGGAATATCAGCGACCAGGCCCACAGACAAACTACGAAC
GTCATGGATATTATATCTAACCAGCTACGTAGCGACCAAATGGGGAAATT
AAGCCCGTTCCTACTGGATGCGCTGTACTGCTCCATGGTGACGTTCCAAT
GGATCTATCGCGAAGGCGGTGACGAGAAAGCCAAAGGCAAACTAGCTGAT
ATAGAGGCTTGCATGGGGATATTGAGTGGACGGTGGAAGTTGGCGTCAGA
ATACATTGCTCTCAATGGAATTTATCGCGACGGAGGGAACACCTAAATGA
CCTGGACAGAACTAGAGGAGAGAAGACGGGTATGGTGGGCCATTTACATC
TTGGATCGCACTATCTCCCTCGGCAGCCGGAGGAGGTTCTGCTTCCCAGA
TCCGGCGGATACAGATGTCCTCCCTGTGGATGATGATACATGGGACATAC
TCACCATTCTCAACCAGCAAAATTTCATATTGGGAACAACTTCGCTTTAC
TTCGATACGATCCATCCGTGGATGCCGATCATTTCAAAAAAGCGACTGGA
CCTCGGCATTTCACTGAAGGACGGTGGACCGGACATCGCGCTGCTTTTCC
TCGCGATGAAGTTAAACACCCTCCCTCCGCCACCTGGCAGCGAGATACAC
GGTGCAATTTATTCGTCTGCCAAAAGATTCTTGGCGACCTTGGAAGCCAG
TGGCGCGGTGTCATTTGGCTACCTACAGGCCATGACTTTGATAGCCGTGT
ACGAATACAGTCACTCGATCTATCCTGCGGCGTGGATGACCGTAGGAGCA
TGCGCCCGACTCGCTGAGCTTCTTGGTATTTCACCTGGTAAAGACACGAT
GAAAATTATGCGTCCCGCTATGGATCGCTCTCAGAATATAGCCTCCCACG
CATGTGTCGCTTGTAAAAGACAAAAACGGAGATGCGACAAACTGCTGCCC
CAGTGCAGCCTGTGCTTCCGCACCAGCCGCACCTGCGACTATGCTGATAC
ACCAAAGTCGCCTCCGACTGCGGCCGACCTCGCAACCCTTCAAGCAAGAT
TGACCGAACTGGAAGAAAGACTTAGTAGCGCCTCTGCGTCAGACTCTCTG
TCTGCTACAGCCGGCGTTTCGCGCACAGATAGCCTTGCCACCGAATCTAT
TGCATACGACCGAGAACCCACCAGCTTTCCGTCAGCCTTGTTTTTGGATA
TAGACTGCTATAAATGGTCCAATATGCAACTCCCAAGGCCGGCTGCCAGC
ATTCCGATGGATCTGGGTGATGTAGCCAACATCATACATTATCCAGTCAC
AACACCCTTTTTCACCCCTGCCTCGCCTTTCTCTCGCCTCTGTCAGTCGG
CAATGTTCATTAGCCGTGCCACCGTGTGTCGAAGCGAATCGACGCAGACA
GGCCTTGCAGACCATATGACCGCTGTTGTCAGCCTTACCGAGGACCTGAG
CACCTTCAGCTCTATTCTTGCCGAAGAGATGGACTCTTCCTCCACGGACG
GATATCTACGACTACTTGCTCCTCAGTGCCTGACGTGGTCGGCCCTCTTC
CTGCTACTCGATAATTATTGCTGCCCAGAAAAACTTAGCAATGAACCAGG
TTACACCACATCCGGCAACACTAAAGGACCGGACGAACTCGCCGCCCAGA
TCCAGGCCACGCTGGTAGTGCGGAATATCAGCGACCAGGCCCACAGACAA
ACTACGAACGTCATGGATATTATATCTAACCAGCTACGTAGCGACCAAAT
GGGGAAATTAAGCCCGTTCCTACTGGATGCGCTGTACTGCTCCATGGTGA
CGTTCCAATGGATCTATCGCGAAGGCGGTGACGAGAAAGCCAAAGGCAAA
CTAGCTGATATAGAGGCTTGCATGGGGATATTGAGTGGACGGTGGAAGTT
GGCGTCAGAATACATTGCTCTCAATGGAATTTATCGCGACGGAGGGAACA
CCTAAATGACCTGGACAGAACTAGAGGAGAGAAGACGGGTATGGTGGGCC
ATTTACATCTTGGATCGCACTATCTCCCTCGGCAGCCGGAGGAGGTTCTG
CTTCCCAGATCCGGCGGATACAGATGTCCTCCCTGTGGATGATGATACAT
GGGACATACTCACCATTCTCAACCAGCAAAATTTCATATTGGGAACAACT
TCGCTTTACTTCGATACGATCCATCCGTGGATGCCGATCATTTCAAAAAA
GCGACTGGACCTCGGCATTTCACTGAAGGACGGTGGACCGGACATCGCGC
TGCTTTTCCTCGCGATGAAGTTAAACACCCTCCCTCCGCCACCTGGCAGC
GAGATACACGGTGCAATTTATTCGTCTGCCAAAAGATTCTTGGCGACCTT
GGAAGCCAGTGGCGCGGTGTCATTTGGCTACCTACAGGCCATGACTTTGA
TAGCCGTGTACGAATACAGTCACTCGATCTATCCTGCGGCGTGGATGACC
GTAGGAGCATGCGCCCGACTCGCTGAGCTTCTTGGTATTTCACCTGGTAA
AGACACGATGAAAATTATGCGTCCCGCTATGGATCGCTCTCAGAATATAG
CCTCCCACGCATGTGTCGCTTGTAAAAGACAAAAACGGAGATGCGACAAA
CTGCTGCCCCAGTGCAGCCTGTGCTTCCGCACCAGCCGCACCTGCGACTA
TGCTGATACACCAAAGTCGCCTCCGACTGCGGCCGACCTCGCAACCCTTC
AAGCAAGATTGACCGAACTGGAAGAAAGACTTAGTAGCGCCTCTGCGTCA
GACTCTCTGTCTGCTACAGCCGGCGTTTCGCGCACAGATAGCCTTGCCAC
CGAATCTATTGCATACGACCGAGAACCCACCAGCTTTCCGTCAGCCTTGT
TTTTGGATATAGACTGCTATAAATGGTCCAATATGCAACTCCCAAGGCCG
GCTGCCAGCATTCCGATGGATCTGGGTGATGTAGCCAACATCATACATTA
TCCAGTCACAACACCCTTTTTCACCCCTGCCTCGCCTTTCTCTCGCCTCT
GTCAGTCGGCAATGTTCATTAGCCGTGCCACCGTGTGTCGAAGCGAATCG
ACGCAGACAGGCCTTGCAGACCATATGACCGCTGTTGTCAGCCTTACCGA
GGACCTGAGCACCTTCAGCTCTATTCTTGCCGAAGAGATGGACTCTTCCT
CCACGGACGGATATCTACGACTACTTGCTCCTCAGTGCCTGACGTGGTCG
GCCCTCTTCCTGCTACTCGATAATTATTGCTGCCCAGAAAAACTTAGCAA
TGAACCAGGTTACACCACATCCGGCAACACTAAAGGACCGGACGAACTCG
CCGCCCAGATCCAGGCCACGCTGGTAGTGCGGAATATCAGCGACCAGGCC
CACAGACAAACTACGAACGTCATGGATATTATATCTAACCAGCTACGTAG
CGACCAAATGGGGAAATTAAGCCCGTTCCTACTGGATGCGCTGTACTGCT
CCATGGTGACGTTCCAATGGATCTATCGCGAAGGCGGTGACGAGAAAGCC
AAAGGCAAACTAGCTGATATAGAGGCTTGCATGGGGATATTGAGTGGACG
GTGGAAGTTGGCGTCAGAATACATTGCTCTCAATGGAATTTATCGCGACG
GAGGGAACACCTAAATGACCTGGACAGAACTAGAGGAGAGAAGACGGGTA
TGGTGGGCCATTTACATCTTGGATCGCACTATCTCCCTCGGCAGCCGGAG
GAGGTTCTGCTTCCCAGATCCGGCGGATACAGATGTCCTCCCTGTGGATG
ATGATACATGGGACATACTCACCATTCTCAACCAGCAAAATTTCATATTG
GGAACAACTTCGCTTTACTTCGATACGATCCATCCGTGGATGCCGATCAT
TTCAAAAAAGCGACTGGACCTCGGCATTTCACTGAAGGACGGTGGACCGG
ACATCGCGCTGCTTTTCCTCGCGATGAAGTTAAACACCCTCCCTCCGCCA
CCTGGCAGCGAGATACACGGTGCAATTTATTCGTCTGCCAAAAGATTCTT
GGCGACCTTGGAAGCCAGTGGCGCGGTGTCATTTGGCTACCTACAGGCCA
TGACTTTGATAGCCGTGTACGAATACAGTCACTCGATCTATCCTGCGGCG
TGGATGACCGTAGGAGCATGCGCCCGACTCGCTGAGCTTCTTGGTATTTC
ACCTGGTAAAGACACGATGAAAATTATGCGTCCCGCTATGGATCGCTCTC
AGAATATAGCCTCCCACGCATGTGTCGCTTGTAAAAGACAAAAACGGAGA
TGCGACAAACTGCTGCCCCAGTGCAGCCTGTGCTTCCGCACCAGCCGCAC
CTGCGACTATGCTGATACACCAAAGTCGCCTCCGACTGCGGCCGACCTCG
CAACCCTTCAAGCAAGATTGACCGAACTGGAAGAAAGACTTAGTAGCGCC
TCTGCGTCAGACTCTCTGTCTGCTACAGCCGGCGTTTCGCGCACAGATAG
CCTTGCCACCGAATCTATTGCATACGACCGAGAACCCACCAGCTTTCCGT
CAGCCTTGTTTTTGGATATAGACTGCTATAAATGGTCCAATATGCAACTC
CCAAGGCCGGCTGCCAGCATTCCGATGGATCTGGGTGATGTAGCCAACAT
CATACATTATCCAGTCACAACACCCTTTTTCACCCCTGCCTCGCCTTTCT
CTCGCCTCTGTCAGTCGGCAATGTTCATTAGCCGTGCCACCGTGTGTCGA
AGCGAATCGACGCAGACAGGCCTTGCAGACCATATGACCGCTGTTGTCAG
CCTTACCGAGGACCTGAGCACCTTCAGCTCTATTCTTGCCGAAGAGATGG
ACTCTTCCTCCACGGACGGATATCTACGACTACTTGCTCCTCAGTGCCTG
ACGTGGTCGGCCCTCTTCCTGCTACTCGATAATTATTGCTGCCCAGAAAA
ACTTAGCAATGAACCAGGTTACACCACATCCGGCAACACTAAAGGACCGG
ACGAACTCGCCGCCCAGATCCAGGCCACGCTGGTAGTGCGGAATATCAGC
GACCAGGCCCACAGACAAACTACGAACGTCATGGATATTATATCTAACCA
GCTACGTAGCGACCAAATGGGGAAATTAAGCCCGTTCCTACTGGATGCGC
TGTACTGCTCCATGGTGACGTTCCAATGGATCTATCGCGAAGGCGGTGAC
GAGAAAGCCAAAGGCAAACTAGCTGATATAGAGGCTTGCATGGGGATATT
GAGTGGACGGTGGAAGTTGGCGTCAGAATACATTGCTCTCAATGGAATTT
ATCGCGACGGAGGGAACACCTAAATGACCTGGACAGAACTAGAGGAGAGA
AGACGGGTATGGTGGGCCATTTACATCTTGGATCGCACTATCTCCCTCGG
CAGCCGGAGGAGGTTCTGCTTCCCAGATCCGGCGGATACAGATGTCCTCC
CTGTGGATGATGATACATGGGACATACTCACCATTCTCAACCAGCAAAAT
TTCATATTGGGAACAACTTCGCTTTACTTCGATACGATCCATCCGTGGAT
GCCGATCATTTCAAAAAAGCGACTGGACCTCGGCATTTCACTGAAGGACG
GTGGACCGGACATCGCGCTGCTTTTCCTCGCGATGAAGTTAAACACCCTC
CCTCCGCCACCTGGCAGCGAGATACACGGTGCAATTTATTCGTCTGCCAA
AAGATTCTTGGCGACCTTGGAAGCCAGTGGCGCGGTGTCATTTGGCTACC
TACAGGCCATGACTTTGATAGCCGTGTACGAATACAGTCACTCGATCTAT
CCTGCGGCGTGGATGACCGTAGGAGCATGCGCCCGACTCGCTGAGCTTCT
TGGTATTTCACCTGGTAAAGACACGATGAAAATTATGCGTCCCGCTATGG
ATCGCTCTCAGAATATAGCCTCCCACGCATGTGTCGCTTGTAAAAGACAA
AAACGGAGATGCGACAAACTGCTGCCCCAGTGCAGCCTGTGCTTCCGCAC
CAGCCGCACCTGCGACTATGCTGATACACCAAAGTCGCCTCCGACTGCGG
CCGACCTCGCAACCCTTCAAGCAAGATTGACCGAACTGGAAGAAAGACTT
AGTAGCGCCTCTGCGTCAGACTCTCTGTCTGCTACAGCCGGCGTTTCGCG
CACAGATAGCCTTGCCACCGAATCTATTGCATACGACCGAGAACCCACCA
GCTTTCCGTCAGCCTTGTTTTTGGATATAGACTGCTATAAATGGTCCAAT
ATGCAACTCCCAAGGCCGGCTGCCAGCATTCCGATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009603KJC3_009603Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009603-T1KJC3_009603-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009603-T1.cdsKJC3_009603-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009603-T1.utr3p1KJC3_009603-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009603-T1.exon4KJC3_009603-T1.exon4Aspergillus niger KJC3exon
KJC3_009603-T1.exon3KJC3_009603-T1.exon3Aspergillus niger KJC3exon
KJC3_009603-T1.exon2KJC3_009603-T1.exon2Aspergillus niger KJC3exon
KJC3_009603-T1.exon1KJC3_009603-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009603-T1.utr5p1KJC3_009603-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:889723..891735 -
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