You are here

Home

KJC3_009606-T1, KJC3_009606-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009606-T1
Unique NameKJC3_009606-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:900943..901965+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009606-T1 ID=KJC3_009606-T1|Name=KJC3_009606-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1023bp|location=Sequence derived from alignment at ch7:900943..901965+ (Aspergillus niger KJC3)
ATGGGCCCCGCTCACCTTCCAACAGAGATCATGCTCTGCTTAGCCGACCA
CATCCCTAGCACACAAGACCTTTACTCTCTCATCCAAGCGAGCCGACGTT
TTTATGACAACCTTCAGCCCATGCTCATCCACCACAACGTCAAGCATAAC
AACAGATCTGCACTCCTATGGGCCGCATGCAGAGGCCGTGGTGATCTAAT
GCATGCTATTCTCCGGATCCCCGGATCTAACTTCGACGTCTCTGTGAACG
TTCCGGACAAAATCCTTTGTTCCTAGCCGCGAAGCACGGCCACGCGGAAG
TCGTCCGACTACTTCTCGCCGAGCCGTCTGGGGGCGGCACCCCGGAATTC
TCGAGCTTCGAAGACCACAATGGTGGTACACCACGCATGGCGGCTGCGAA
AGCGGGACATCTGCAGGTCGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAG
TAGTAGTAGTAGTAGTAGTCGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTATTCATTAACCTGAT
ATAGCCGGCCTTACTGACATCTGCAGGTCGTCCAGCTCCTGTTGCGATAT
TGGCGGGTTGAAGTCAACAGGGACAACTACGACGACCATACAGCACTGGC
TCAAGCCGCAATAGCAGGCTGCCCGGCAGTAGTCAAGCTGCTGCTGAAAG
TGGAAGATATTGAGCCAGATTGGCCTGGTGCCGATCTGTGTCCACCACTG
GCGTGTGCGGCGAAGGCTGGCCATCTGGAAGTTGTAAAGGCGTTACTGCA
AGGGGAAACGCGGGCAGATGTGAGACTTGGAGATTGGGACGGTGTGTCAC
TGTTGATGTGGGCGGTGCGGCACGGAGTCTGCCATGTGGTGGAGTTCTTG
CTCGATCATGATGATATGGATGTGGCGCCCCAGGATAGCTATGGTCGGAC
AGCGCGCATGTGGGCGGAAGAGTGTGGGAATCAGGAAATTGTGCGATTGT
TCCATTCCCGTGAAATAAAATGA
back to top

Coding sequence (CDS) from alignment at ch7:900943..901965+

>KJC3_009606-T1 ID=KJC3_009606-T1|Name=KJC3_009606-T1|organism=Aspergillus niger KJC3|type=CDS|length=2331bp|location=Sequence derived from alignment at ch7:900943..901965+ (Aspergillus niger KJC3)
ATGGGCCCCGCTCACCTTCCAACAGAGATCATGCTCTGCTTAGCCGACCA
CATCCCTAGCACACAAGACCTTTACTCTCTCATCCAAGCGAGCCGACGTT
TTTATGACAACCTTCAGCCCATGCTCATCCACCACAACGTCAAGCATAAC
AACAGATCTGCACTCCTATGGGCCGCATGCAGAGGCCGTGCCGCGAAGCA
CGGCCACGCGGAAGTCGTCCGACTACTTCTCGCCGAGCCGTCTGGGGGCG
GCACCCCGGAATTCTCGAGCTTCGAAGACCACAATGGTGGTACACCACGC
ATGGCGGCTGCGAAAGCGGGACATCTGCAGGTCGTCCAGCTCCTGTTGCG
ATATTGGCGGGTTGAAGTCAACAGGGACAACTACGACGACCATACAGCAC
TGGCTCAAGCCGCAATAGCAGGCTGCCCGGCAGTAGTCAAGCTGCTGCTG
AAAGTGGAAGATATTGAGCCAGATTGGCCTGGTGCCGATCTGTGTCCACC
ACTGGCGTGTGCGGCGAAGGCTGGCCATCTGGAAGTTGTAAAGGCGTTAC
TGCAAGGGGAAACGCGGGCAGATGTGAGACTTGGAGATTGGGACGGTGTG
TCACTGTTGATGTGGGCGGTGCGGCACGGAGTCTGCCATGTGGTGGAGTT
CTTGCTCGATCATGATGATATGGATGTGGCGCCCCAGGATAGCTATGGTC
GGACAGCGCGCATGTGGGCGGAAGAGTGTGGGAATCAGGAAATTGTGCGA
TTGTTCCATTCCCGTGAAATAAAATGAATGGGCCCCGCTCACCTTCCAAC
AGAGATCATGCTCTGCTTAGCCGACCACATCCCTAGCACACAAGACCTTT
ACTCTCTCATCCAAGCGAGCCGACGTTTTTATGACAACCTTCAGCCCATG
CTCATCCACCACAACGTCAAGCATAACAACAGATCTGCACTCCTATGGGC
CGCATGCAGAGGCCGTGCCGCGAAGCACGGCCACGCGGAAGTCGTCCGAC
TACTTCTCGCCGAGCCGTCTGGGGGCGGCACCCCGGAATTCTCGAGCTTC
GAAGACCACAATGGTGGTACACCACGCATGGCGGCTGCGAAAGCGGGACA
TCTGCAGGTCGTCCAGCTCCTGTTGCGATATTGGCGGGTTGAAGTCAACA
GGGACAACTACGACGACCATACAGCACTGGCTCAAGCCGCAATAGCAGGC
TGCCCGGCAGTAGTCAAGCTGCTGCTGAAAGTGGAAGATATTGAGCCAGA
TTGGCCTGGTGCCGATCTGTGTCCACCACTGGCGTGTGCGGCGAAGGCTG
GCCATCTGGAAGTTGTAAAGGCGTTACTGCAAGGGGAAACGCGGGCAGAT
GTGAGACTTGGAGATTGGGACGGTGTGTCACTGTTGATGTGGGCGGTGCG
GCACGGAGTCTGCCATGTGGTGGAGTTCTTGCTCGATCATGATGATATGG
ATGTGGCGCCCCAGGATAGCTATGGTCGGACAGCGCGCATGTGGGCGGAA
GAGTGTGGGAATCAGGAAATTGTGCGATTGTTCCATTCCCGTGAAATAAA
ATGAATGGGCCCCGCTCACCTTCCAACAGAGATCATGCTCTGCTTAGCCG
ACCACATCCCTAGCACACAAGACCTTTACTCTCTCATCCAAGCGAGCCGA
CGTTTTTATGACAACCTTCAGCCCATGCTCATCCACCACAACGTCAAGCA
TAACAACAGATCTGCACTCCTATGGGCCGCATGCAGAGGCCGTGCCGCGA
AGCACGGCCACGCGGAAGTCGTCCGACTACTTCTCGCCGAGCCGTCTGGG
GGCGGCACCCCGGAATTCTCGAGCTTCGAAGACCACAATGGTGGTACACC
ACGCATGGCGGCTGCGAAAGCGGGACATCTGCAGGTCGTCCAGCTCCTGT
TGCGATATTGGCGGGTTGAAGTCAACAGGGACAACTACGACGACCATACA
GCACTGGCTCAAGCCGCAATAGCAGGCTGCCCGGCAGTAGTCAAGCTGCT
GCTGAAAGTGGAAGATATTGAGCCAGATTGGCCTGGTGCCGATCTGTGTC
CACCACTGGCGTGTGCGGCGAAGGCTGGCCATCTGGAAGTTGTAAAGGCG
TTACTGCAAGGGGAAACGCGGGCAGATGTGAGACTTGGAGATTGGGACGG
TGTGTCACTGTTGATGTGGGCGGTGCGGCACGGAGTCTGCCATGTGGTGG
AGTTCTTGCTCGATCATGATGATATGGATGTGGCGCCCCAGGATAGCTAT
GGTCGGACAGCGCGCATGTGGGCGGAAGAGTGTGGGAATCAGGAAATTGT
GCGATTGTTCCATTCCCGTGAAATAAAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009606KJC3_009606Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009606-T1.exon1KJC3_009606-T1.exon1Aspergillus niger KJC3exon
KJC3_009606-T1.exon2KJC3_009606-T1.exon2Aspergillus niger KJC3exon
KJC3_009606-T1.exon3KJC3_009606-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009606-T1.cdsKJC3_009606-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009606-T1KJC3_009606-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:900943..901965 +
Powered by Drupal