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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:972283..973786+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009638-T1 ID=KJC3_009638-T1|Name=KJC3_009638-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1504bp|location=Sequence derived from alignment at ch7:972283..973786+ (Aspergillus niger KJC3) GTGATTTTCTGTCGTCGCCTCATTGAATCCACCCTCTATCACGACTGCTC
TCGCCGTGATTCTGCCTGGAGCAGACGACTCAACTTCGCGTGAACCGATC
GCGCCACTCCTTGCTCCTACTCTGAGCCTGTCACCCCCCAGCTGCGCCTT
CCTCCGCCAATCTCTCCCCGACACAAAATTTGCCATCCGCGCTATTTTGT
CTCTTCCCCTCCGACACGACCGCTCTCCCTCTCATCACCACAATCCCGCC
GCTGCATCCTCTTCAACCACCTCTCACTTTCCCCTCACTTTCTCATTCAA
CTTTCATAATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGAC
GAGAACGCCGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGA
GAAGACGAATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCA
ATGTGAAGCATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCC
CCTAGCGGCAAGGTACGGATTCTTGCCGAATCAGACGCAGCAGTTGATCA
GACAACTAACCTTGCCTGTGCGATAGGGCGATAACTGGAATGATCTGTTG
AAGGAAGTCGTGACTTTCAACTCCGTTGAGGAATTCTGGGGTATCTACGT
ATGTGTTCTTCTTTTGGGCCCACCGAGGAGACCTGCCCGCTAACCAATGC
TTCCTTAGAACAACATCTCGCCGACATCCGAGTTGGGCCTCAAAGCAGAC
TACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCCCCAGAA
CAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCTCCGTGC
CCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCTATTGGCGAGACT
CTCGAGAACGATGGTGACAACGAGGTTATGGGTGTTGTTGTGAACGTACG
CAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCAAGAGTA
TCCCCGGAGACAAGAACGGTCGCACACCCGCACAGGGCAAGGAGATCCTC
GAGAACATCGGCCGGCGTTTCAAGGAAGTCCTTCGTCTCAAGGAGGCTGA
TGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACAGCGGCAGCACGA
GAGCCAAGGCCAAGTACACTGTCTAAGGTATAACCTGTGTGTGCAGCTCC
ATTTACGAGGTATTCATTGCGGATCTGTTTCTTTGCTACGGAATAATGGG
AAGTCTTTGTGACGATGGTTGATAACGAATCCGAATGGACCGGCATGAGG
AAATGCGCGTCCGACTTGCTTGCATTTGCAGTTACAGTGGTGGTTCGGTC
ATAGGCACTGATGGCATGTTTCTTTCCCTCAGTACGTATTTCTGACGAGG
TTTATACCATATTTCATCGAGTTATAGCTTTACGCCTCTAGTGGCCCACA
AAATAACGAAAAACACTCTTAAAACATCTTATTCTAGTGCATTCTCAATA
GACA back to topCoding sequence (CDS) from alignment at ch7:972283..973786+ >KJC3_009638-T1 ID=KJC3_009638-T1|Name=KJC3_009638-T1|organism=Aspergillus niger KJC3|type=CDS|length=2232bp|location=Sequence derived from alignment at ch7:972283..973786+ (Aspergillus niger KJC3) ATGGCCGCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGC CGCCCCCGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGA ATGGAGACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAG CATCCTTTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGG CAAGGGCGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACT CCGTTGAGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAG TTGGGCCTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGA GTGGGAAGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCA AGGACAAGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTG GCCGCTATTGGCGAGACTCTCGAGAACGATGGTGACAACGAGGTTATGGG TGTTGTTGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTC GGACTGTTGGCAAGAGTATCCCCGGAGACAAGAACGGTCGCACACCCGCA CAGGGCAAGGAGATCCTCGAGAACATCGGCCGGCGTTTCAAGGAAGTCCT TCGTCTCAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCG CACACAGCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCC GCTGTTGCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCC CGTTGCTGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAG ACTCTGTCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCT TTGATGCACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGG CGATAACTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTG AGGAATTCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGC CTCAAAGCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGA AGACCCCCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACA AGCGCTCCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCT ATTGGCGAGACTCTCGAGAACGATGGTGACAACGAGGTTATGGGTGTTGT TGTGAACGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTG TTGGCAAGAGTATCCCCGGAGACAAGAACGGTCGCACACCCGCACAGGGC AAGGAGATCCTCGAGAACATCGGCCGGCGTTTCAAGGAAGTCCTTCGTCT CAAGGAGGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACA GCGGCAGCACGAGAGCCAAGGCCAAGTACACTGTCTAAATGGCCGCTGTT GCTGAGAACGGCCACGCGCCCGTGGCTGACGAGAACGCCGCCCCCGTTGC TGCCGCCGTCGAACAGAAGGAACAGACCGAGAAGACGAATGGAGACTCTG TCACAGTATTCCACGACCCCGAAAACTTCAATGTGAAGCATCCTTTGATG CACGAGTGGACTCTGTGGTTTACCAAGCCCCCTAGCGGCAAGGGCGATAA CTGGAATGATCTGTTGAAGGAAGTCGTGACTTTCAACTCCGTTGAGGAAT TCTGGGGTATCTACAACAACATCTCGCCGACATCCGAGTTGGGCCTCAAA GCAGACTACCATCTCTTCAAGAAGGGAGTTCGTCCCGAGTGGGAAGACCC CCAGAACAAGCACGGAGGCAAGTGGTCATACTCTTTCAAGGACAAGCGCT CCGTGCCCATCGACGACCTGTGGCTGCACGCACAACTGGCCGCTATTGGC GAGACTCTCGAGAACGATGGTGACAACGAGGTTATGGGTGTTGTTGTGAA CGTACGCAAGGGCTTCTACCGTGTTGGTCTGTGGACTCGGACTGTTGGCA AGAGTATCCCCGGAGACAAGAACGGTCGCACACCCGCACAGGGCAAGGAG ATCCTCGAGAACATCGGCCGGCGTTTCAAGGAAGTCCTTCGTCTCAAGGA GGCTGATGCCGTTGAGTTCTCGGGTCACACGGACAGCGCACACAGCGGCA GCACGAGAGCCAAGGCCAAGTACACTGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
Term | Definition |
GO:0003743 | translation initiation factor activity |
GO:0003723 | RNA binding |
Vocabulary: Biological Process
Term | Definition |
GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009638-T1.utr5p1 | KJC3_009638-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009638-T1.utr3p1 | KJC3_009638-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
Note | BUSCO:EOG092646VF |
DBxref | InterPro:IPR019770 |
DBxref | InterPro:IPR023398 |
DBxref | InterPro:IPR001040 |
DBxref | PFAM:PF01652 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:972283..973786 + |
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