|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:984152..986328- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009641-T1 ID=KJC3_009641-T1|Name=KJC3_009641-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2177bp|location=Sequence derived from alignment at ch7:984152..986328- (Aspergillus niger KJC3)
GTGGGAAGAAATCTACTTATAGATGGAAAGACAGTTGGAGATGTCAAATG
CAGTATTGGAATGTGGTTGCACGTGCACGTCCCCCAAGAAAAATGGATCC
CTCCTAGATGGTATTTTTGGACGGAACGCAATTGGTGGATTAAGGGTGCG
TATTTCCTCAACTAGTAAGAGGCTTTTGCTACAGGGCAGTGGGTAATGAC
CAGCAATATGCAGGTAGCAAGATCTTTCTCGGGACAATTGAGCCTACTCA
TGGCCATCACCTCGTTTCTACACCTATACCCCAACAGACGGTCAACTGGC
AGAAGGTTAACATGTGGGTGAGTGATTGCCACAACTCTGTCAAGCGCGAG
GGTTCCCTCCAGGCAAAGCCTGATACATCGCAAATAACTGGGCTTCGTGT
TATTGACACCAGACAACGGTGCATTACCATTGCCCCTGCAGCATGTCGAT
ATGCGGCTCTGAGCTATGTGTGGGGGGCCACGAGCAGCGACTTGCAGGCA
ACGACGATGAACATAAAAGACCTGATGAGGAAAGGCTCTTTAGACAGCCG
TTCTCTACCACAGACTATCGATGACGCCATTGTTGCTTGTATGAAAATGG
GGATAGGCTATCTTTGGGTTGATCGCCTTTGCATATTGCAGGACGACGAT
CCTAGCAGAAAAGCCCATTGGCTCAACTCTATGGGTGACATATACGCACA
AGCATATGTAACAATCATCGCTCTGGCTGGAAAAAATGCTCAGCACGGCC
TTCCGGGGGTAAACTTGGTGAAGCGACCGGCATCCTGGACTGGAACAACA
CAGGGGATATACCTGATTGAGAAAACCCCCGCTTATACAGAGTGTTTACG
GAAATCGAGATGGTCTACTAGGGGTTGGACATTCCAAGAGGCGACGCTCT
CATCACGACGGCTTCTATTCTCCGACACAAGAGTTTTCTATGAATGTTCC
AACCACAAAAACATAAAAGATGAGTTAACTGGTGACTACCCCAATACCGC
TGAAACCGCAGGGGCTGCGCTATTGAGTTACGCCAAGGTGGTGAGCCGGT
TCACGAAAAGGAAACTAACTTGGGAGTGTGATGTACTTCGCGCATTCGCA
GGCGTTCTACACACAGGATGGGGACCCGAGAATTATTATGGCATACCCCT
GAATATCTTCAGTGATGCAATTCTCTGGAGGACGGTGAAAAAGAATCCGT
ATTCCACGAGGCATGCAGCTCCTGGTGATGCATTTCCTTCCTGGTCGTGG
TCTTCCATCAAAGGTCGCATAACAGTCGAACCATCAGCCAGGGAAGGTGG
CATATTTGCAGAAATGCGGGCTTCTCTAGCAATTTGGGCGATCCCTCGTA
GGGCGAGACAGCGACTAGAACTTCAGATAATCGCAAATACCCTGGGGAAA
CCAGAGAAGCCCAACAAACTAGATGATGTGAAGTCGCCCAACAACATGAA
CGAGAAGGAAGTAACACATACTGCACATGAGTTGTATGCTCCTTGTAATT
TCAGGGACTTACCTACACGACTTGGCGTTGTGATGGCCTGGAGATGTGGA
TGTTTCTCGGGATCTCTACCGGGCATACTCAACACTCCATTTACGTGGGG
CGAATACAAGGTTTTTGCTAGGAAATGGAGAACCCTTGGGCATCTCTGCG
ATGAGGCTCATGGAATGTCACAGGGTAGCATGTCTGAACAAGATATAGAA
GCGCGATTTCCTTCGAATATGCGTCAAGGATGTCCTCCAGGATCCATCTT
TGTCTACACTCAATCACTTAATCTCAACCCATTACAACTAAGCCTGAAGA
AGGATATGTCGCTCCAAAAAGACATACTTGCTATTGAAGTTGGCGATTTT
CTTGCCCTCGTCATCGATGGCTCCATCAACATCGAGCGAATCAACCATGT
TCGCCAACATAATCCCGAATCTTGTTTCAGTCTGCTTGCTATCTCACTCT
CAGAACCTTGGGACTCCGAGACAGAGCACTTGAAACCAAGAACTGAAGAC
TTCTGGTATGATTTTGCAGGAGTTCCATTGGGTCAAAATCCGCATGATCC
CCATGCGATCGAGCTTATGCTTGTTGAGACGGAAAATGGCATTAGTCGGC
GTGCTGGACTGGCACGGGGTTATTTAAAACGATGGATAGACCAGAACCCT
CAGTTCCAGACATTCCACCTTGTATAG back to topCoding sequence (CDS) from alignment at ch7:984152..986328- >KJC3_009641-T1 ID=KJC3_009641-T1|Name=KJC3_009641-T1|organism=Aspergillus niger KJC3|type=CDS|length=4098bp|location=Sequence derived from alignment at ch7:984152..986328- (Aspergillus niger KJC3)
GTAGCAAGATCTTTCTCGGGACAATTGAGCCTACTCATGGCCATCACCTC
GTTTCTACACCTATACCCCAACAGACGGTCAACTGGCAGAAGGTTAACAT
GTGGGTGAGTGATTGCCACAACTCTGTCAAGCGCGAGGGTTCCCTCCAGG
CAAAGCCTGATACATCGCAAATAACTGGGCTTCGTGTTATTGACACCAGA
CAACGGTGCATTACCATTGCCCCTGCAGCATGTCGATATGCGGCTCTGAG
CTATGTGTGGGGGGCCACGAGCAGCGACTTGCAGGCAACGACGATGAACA
TAAAAGACCTGATGAGGAAAGGCTCTTTAGACAGCCGTTCTCTACCACAG
ACTATCGATGACGCCATTGTTGCTTGTATGAAAATGGGGATAGGCTATCT
TTGGGTTGATCGCCTTTGCATATTGCAGGACGACGATCCTAGCAGAAAAG
CCCATTGGCTCAACTCTATGGGTGACATATACGCACAAGCATATGTAACA
ATCATCGCTCTGGCTGGAAAAAATGCTCAGCACGGCCTTCCGGGGGTAAA
CTTGGTGAAGCGACCGGCATCCTGGACTGGAACAACACAGGGGATATACC
TGATTGAGAAAACCCCCGCTTATACAGAGTGTTTACGGAAATCGAGATGG
TCTACTAGGGGTTGGACATTCCAAGAGGCGACGCTCTCATCACGACGGCT
TCTATTCTCCGACACAAGAGTTTTCTATGAATGTTCCAACCACAAAAACA
TAAAAGATGAGTTAACTGGTGACTACCCCAATACCGCTGAAACCGCAGGG
GCTGCGCTATTGAGTTACGCCAAGGTGGTGAGCCGGTTCACGAAAAGGAA
ACTAACTTGGGAGTGTGATGTACTTCGCGCATTCGCAGGCGTTCTACACA
CAGGATGGGGACCCGAGAATTATTATGGCATACCCCTGAATATCTTCAGT
GATGCAATTCTCTGGAGGACGGTGAAAAAGAATCCGTATTCCACGAGGCA
TGCAGCTCCTGGTGATGCATTTCCTTCCTGGTCGTGGTCTTCCATCAAAG
GTCGCATAACAGTCGAACCATCAGCCAGGGAAGGTGGCATATTTGCAGAA
ATGCGGGCTTCTCTAGCAATTTGGGCGATCCCTCGTAGGGCGAGACAGCG
ACTAGAACTTCAGATAATCGCAAATACCCTGGGGAAACCAGAGAAGCCCA
ACAAACTAGATGATGTGAAGTCGCCCAACAACATGAACGAGAAGGAAGTA
ACACATACTGCACATGAGTTGTATGCTCCTTGTAATTTCAGGGACTTACC
TACACGACTTGGCGTTGTGATGGCCTGGAGATGTGGATGTTTCTCGGGAT
CTCTACCGGGCATACTCAACACTCCATTTACGTGGGGCGAATACAAGGTT
TTTGCTAGGAAATGGAGAACCCTTGGGCATCTCTGCGATGAGGCTCATGG
AATGTCACAGGGTAGCATGTCTGAACAAGATATAGAAGCGCGATTTCCTT
CGAATATGCGTCAAGGATGTCCTCCAGGATCCATCTTTGTCTACACTCAA
TCACTTAATCTCAACCCATTACAACTAAGCCTGAAGAAGGATATGTCGCT
CCAAAAAGACATACTTGCTATTGAAGTTGGCGATTTTCTTGCCCTCGTCA
TCGATGGCTCCATCAACATCGAGCGAATCAACCATGTTCGCCAACATAAT
CCCGAATCTTGTTTCAGTCTGCTTGCTATCTCACTCTCAGAACCTTGGGA
CTCCGAGACAGAGCACTTGAAACCAAGAACTGAAGACTTCTGGTATGATT
TTGCAGGAGTTCCATTGGGTCAAAATCCGCATGATCCCCATGCGATCGAG
CTTATGCTTGTTGAGACGGAAAATGGCATTAGTCGGCGTGCTGGACTGGC
ACGGGGTTATTTAAAACGATGGATAGACCAGAACCCTCAGTTCCAGACAT
TCCACCTTGTATAGATGTGGTTGCACGTGCACGTCCCCCAAGAAAAATGG
ATCCCTCCTAGATGGTATTTTTGGACGGAACGCAATTGGTGGATTAAGGG
TAGCAAGATCTTTCTCGGGACAATTGAGCCTACTCATGGCCATCACCTCG
TTTCTACACCTATACCCCAACAGACGGTCAACTGGCAGAAGGTTAACATG
TGGGTGAGTGATTGCCACAACTCTGTCAAGCGCGAGGGTTCCCTCCAGGC
AAAGCCTGATACATCGCAAATAACTGGGCTTCGTGTTATTGACACCAGAC
AACGGTGCATTACCATTGCCCCTGCAGCATGTCGATATGCGGCTCTGAGC
TATGTGTGGGGGGCCACGAGCAGCGACTTGCAGGCAACGACGATGAACAT
AAAAGACCTGATGAGGAAAGGCTCTTTAGACAGCCGTTCTCTACCACAGA
CTATCGATGACGCCATTGTTGCTTGTATGAAAATGGGGATAGGCTATCTT
TGGGTTGATCGCCTTTGCATATTGCAGGACGACGATCCTAGCAGAAAAGC
CCATTGGCTCAACTCTATGGGTGACATATACGCACAAGCATATGTAACAA
TCATCGCTCTGGCTGGAAAAAATGCTCAGCACGGCCTTCCGGGGGTAAAC
TTGGTGAAGCGACCGGCATCCTGGACTGGAACAACACAGGGGATATACCT
GATTGAGAAAACCCCCGCTTATACAGAGTGTTTACGGAAATCGAGATGGT
CTACTAGGGGTTGGACATTCCAAGAGGCGACGCTCTCATCACGACGGCTT
CTATTCTCCGACACAAGAGTTTTCTATGAATGTTCCAACCACAAAAACAT
AAAAGATGAGTTAACTGGTGACTACCCCAATACCGCTGAAACCGCAGGGG
CTGCGCTATTGAGTTACGCCAAGGTGGTGAGCCGGTTCACGAAAAGGAAA
CTAACTTGGGAGTGTGATGTACTTCGCGCATTCGCAGGCGTTCTACACAC
AGGATGGGGACCCGAGAATTATTATGGCATACCCCTGAATATCTTCAGTG
ATGCAATTCTCTGGAGGACGGTGAAAAAGAATCCGTATTCCACGAGGCAT
GCAGCTCCTGGTGATGCATTTCCTTCCTGGTCGTGGTCTTCCATCAAAGG
TCGCATAACAGTCGAACCATCAGCCAGGGAAGGTGGCATATTTGCAGAAA
TGCGGGCTTCTCTAGCAATTTGGGCGATCCCTCGTAGGGCGAGACAGCGA
CTAGAACTTCAGATAATCGCAAATACCCTGGGGAAACCAGAGAAGCCCAA
CAAACTAGATGATGTGAAGTCGCCCAACAACATGAACGAGAAGGAAGTAA
CACATACTGCACATGAGTTGTATGCTCCTTGTAATTTCAGGGACTTACCT
ACACGACTTGGCGTTGTGATGGCCTGGAGATGTGGATGTTTCTCGGGATC
TCTACCGGGCATACTCAACACTCCATTTACGTGGGGCGAATACAAGGTTT
TTGCTAGGAAATGGAGAACCCTTGGGCATCTCTGCGATGAGGCTCATGGA
ATGTCACAGGGTAGCATGTCTGAACAAGATATAGAAGCGCGATTTCCTTC
GAATATGCGTCAAGGATGTCCTCCAGGATCCATCTTTGTCTACACTCAAT
CACTTAATCTCAACCCATTACAACTAAGCCTGAAGAAGGATATGTCGCTC
CAAAAAGACATACTTGCTATTGAAGTTGGCGATTTTCTTGCCCTCGTCAT
CGATGGCTCCATCAACATCGAGCGAATCAACCATGTTCGCCAACATAATC
CCGAATCTTGTTTCAGTCTGCTTGCTATCTCACTCTCAGAACCTTGGGAC
TCCGAGACAGAGCACTTGAAACCAAGAACTGAAGACTTCTGGTATGATTT
TGCAGGAGTTCCATTGGGTCAAAATCCGCATGATCCCCATGCGATCGAGC
TTATGCTTGTTGAGACGGAAAATGGCATTAGTCGGCGTGCTGGACTGGCA
CGGGGTTATTTAAAACGATGGATAGACCAGAACCCTCAGTTCCAGACATT
CCACCTTGTATAGATGTGGTTGCACGTGCACGTCCCCCAAGAAAAATGGA
TCCCTCCTAGATGGTATTTTTGGACGGAACGCAATTGGTGGATTAAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009641-T1.utr5p1 | KJC3_009641-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:984152..986328 - |
|
