You are here

Home

KJC3_009644-T2, KJC3_009644-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009644-T2
Unique NameKJC3_009644-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:992115..993304+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009644-T2 ID=KJC3_009644-T2|Name=KJC3_009644-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1190bp|location=Sequence derived from alignment at ch7:992115..993304+ (Aspergillus niger KJC3)
GAAAGTGTGACCAAGCCGATAATGAGTTGTTACAAATCTTACATACATTA
GCGTGGATACGCCCTGACAGTGACAAGGGCTGGTCGTTACATTAGCCAGA
AGCTCGGACCACCCCCATCTATCAGGTACATATAGGCTGCTCAGCACCCA
CTCACTACTCCACACCCTGTCTTTTGAATCTAACATAGGTTCTCTGGATA
TTCAATTACAAATGCACCGTCAGCTACGTTTCTGACTATCTTTATCCCAG
CGTGTGCCCTCTCAGAGACTCTACAGTACTACCCAACGGAGCATCAAAAG
ATTTAGCCCAATCACGGTACGTCTAAAACCCCCTAGTAAGCAGAATCCGG
GGCAACAACCTAATAAATCAATAGATGGCCGAATCTACAAAACTCATCTA
CCAACAAGACGGACAGCTGCTGCTCCACGGCGCCAAAGTTCTGTCCATCA
TCCCAGTTTCCAAACTCCCAGAGGCAGACCAAGCCCTGGCCAAAGACTCG
GCCGAAATAGAGCATGCCGTGGTCACCGACTCCACGATCTTCCACGTCCA
GGGCGGCGGCCAGCCCTCAGACACCGGAACCATGACCACGGACGTAGCGC
CCAAAGCAGACTTAATCTTCGAAGTGAAGTCAGTCCGCCAACCAGCCCAG
GGAAACCAGATCCTTCACTTGGGTCGGTTCGTCCCGGTCGGGACTACGCA
GTTCGACTCCGGGGAGGAAGTCCAGCAGCGCGTTGACGCTGAGAAGCGGA
ACCTGCACTCTCGTCTTCATACCGCTGGACATGTCATGAGTTTGGCGATT
CATGCGCTGTGTCGCGAGGGTGTGCTTCCCCCGGTGAAGGAGTCGAAGGC
GTCGCATTATCCGGGTTCGGCGTCGGTTTCTTTTGAGGGGACGTTGGAGG
GGAAGCATAAGGAGCTTATTCAGGCGAAGACGGATGAGTTTGTGCGGTCG
GCGAGTCCGGTTAGGATTCATTGGTGGTCCATGGAGGAGTTGAAGGAGAA
GTGTTATGTTGCGGAGGGGTTTGCGTTGCCTGAGGGTGAGACGCTGGGGA
GAGTGGTTGAGATGGAAGGGTTGGGAAGTTATCCTTGTGGTGGGACGCAT
GTGACGGATTGTAGTCTTGTGGGGAAGATTGAGGTGAAGAAGATTTCAAG
GTCGAAGGGGGTTAGTAGGGTGTCGTATACTGTTGTATAA
back to top

Coding sequence (CDS) from alignment at ch7:992115..993304+

>KJC3_009644-T2 ID=KJC3_009644-T2|Name=KJC3_009644-T2|organism=Aspergillus niger KJC3|type=CDS|length=816bp|location=Sequence derived from alignment at ch7:992115..993304+ (Aspergillus niger KJC3)
ATGGCCGAATCTACAAAACTCATCTACCAACAAGACGGACAGCTGCTGCT
CCACGGCGCCAAAGTTCTGTCCATCATCCCAGTTTCCAAACTCCCAGAGG
CAGACCAAGCCCTGGCCAAAGACTCGGCCGAAATAGAGCATGCCGTGGTC
ACCGACTCCACGATCTTCCACGTCCAGGGCGGCGGCCAGCCCTCAGACAC
CGGAACCATGACCACGGACGTAGCGCCCAAAGCAGACTTAATCTTCGAAG
TGAAGTCAGTCCGCCAACCAGCCCAGGGAAACCAGATCCTTCACTTGGGT
CGGTTCGTCCCGGTCGGGACTACGCAGTTCGACTCCGGGGAGGAAGTCCA
GCAGCGCGTTGACGCTGAGAAGCGGAACCTGCACTCTCGTCTTCATACCG
CTGGACATGTCATGAGTTTGGCGATTCATGCGCTGTGTCGCGAGGGTGTG
CTTCCCCCGGTGAAGGAGTCGAAGGCGTCGCATTATCCGGGTTCGGCGTC
GGTTTCTTTTGAGGGGACGTTGGAGGGGAAGCATAAGGAGCTTATTCAGG
CGAAGACGGATGAGTTTGTGCGGTCGGCGAGTCCGGTTAGGATTCATTGG
TGGTCCATGGAGGAGTTGAAGGAGAAGTGTTATGTTGCGGAGGGGTTTGC
GTTGCCTGAGGGTGAGACGCTGGGGAGAGTGGTTGAGATGGAAGGGTTGG
GAAGTTATCCTTGTGGTGGGACGCATGTGACGGATTGTAGTCTTGTGGGG
AAGATTGAGGTGAAGAAGATTTCAAGGTCGAAGGGGGTTAGTAGGGTGTC
GTATACTGTTGTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006419alanyl-tRNA aminoacylation
GO:0043039tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0004813alanine-tRNA ligase activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009644KJC3_009644Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009644-T2KJC3_009644-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009644-T2.utr5p1KJC3_009644-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009644-T2.utr5p2KJC3_009644-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009644-T2.utr5p3KJC3_009644-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009644-T2.exon1KJC3_009644-T2.exon1Aspergillus niger KJC3exon
KJC3_009644-T2.exon2KJC3_009644-T2.exon2Aspergillus niger KJC3exon
KJC3_009644-T2.exon3KJC3_009644-T2.exon3Aspergillus niger KJC3exon
KJC3_009644-T2.exon4KJC3_009644-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009644-T2.cdsKJC3_009644-T2.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR018163
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR018165
DBxrefInterPro:IPR012947
DBxrefPFAM:PF07973
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:992115..993304 +
Powered by Drupal