|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:995424..997571+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009646-T1 ID=KJC3_009646-T1|Name=KJC3_009646-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2148bp|location=Sequence derived from alignment at ch7:995424..997571+ (Aspergillus niger KJC3)
CTGTATGTCTTTGTTCTTTTATAACTATGCAATTGTGACGGTCAATAATC
TAATATATACATTGGGATGCTCAATAACTAGGTACGTTGACCTGCAGTCT
CGAAACATCTAATGCTAATCAATTACGGTGCAGCTTGGTCTAATTACCTT
TCTACCGAATAATAATTAATTTGCGATCCGCGTGCGATTCTCGTTTTTTA
TACTATTCTATTTGACCAATCCGTCGGTACCACTCACCGACACCATCAGC
ATGACCGACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTT
CGACGAAAAGACAATAAACAATGAGACCATCAAGGAAAAGAAATGGGGAA
TCCTGTCAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCT
CCAGATGGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGAT
CATCATGAATACCTGGTAGGTTCCAATGCTTTGCTTTCGCACTTGTCAAA
GCTCAGGTGGTTCCTCCAGGAGTGTGGTTACACTTTGCGCTGGCCCAATT
GTGAAAAGTATGCTGAAATAGGGCCAGGGGCTACATGAATTCGTTTGGTA
TCTTTCAGACTTATTACGTCGATTTTCTCAATCGCTCGGATTCGGATGTT
TCATGGATTGGAAGCGTTCAGGTCTTTATTGTCTTCTTTATTGGTACTTT
TACTGGGAGGCTTACAGATGCGGGCCACTTTCGGCCGGTTTTTGGTGAGT
TTTCTTGTCTACTTTGCACAGTCTTCAGAGATACGTCTCAGTGCTTTAAC
TTACAGATTATTTCAATCCCCGCTATTGAAGAAATATGCTAATTACTGTA
CTGTAGTTGTCGGAACCATCCTCAGTGTCCTCGGCATGTTCATGGCCTCC
ATATCAACAGAGTATTACCAAGTATTCCTCGCCCAAGGAATCTGCTGCGG
TATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTCAGTAACTTCCACCT
ACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCTGCGCATGCGGCAGC
GCCACAGGCGGCCTAATCTTCACAGTAATGTTCCAGCACCTGATCCCACA
GATTGGCTACGGATGGACGATGCGAGTCTTCGGCTTCTTCACCCTAGCCT
GTCTAATCATCTGCAACATTCTAGCCAGACCGAGAGTGCCCCCTCGGAAA
ACCGGCCCTCTTATTGAACTCGCTGCTTTCAAGGAACCATCATACACCTT
GTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGTTTATTTCGCTTTTT
ATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGATCTCTCAGGAAGAA
TCGCTTACTTTCACGCTTATCTTGAATGGTCTGGGTATCATTGGTCGTCC
GGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCCGATGAATATTCTCA
TTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTGCCATGATTGGTGTC
ACTTCTATATCGGGGCTCTATGCATGGACTGTGGTCTATGGTATTGTGGG
AAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAGCAGCTTGACGACTG
ATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTTTCGTGAGTTCTCCG
TCCTCCCAAGTTGCTGTGGGAAAGAGTGAGCTTCATGACTAATTTGGGTA
TAGACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCTATCGCTGGTGT
CTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGG
CGTGCTCGATGCTCGTCGGCTTTTGTCTGCTCTGTGCGGCTAGATTGGCG
AGGACTGGAAAGGTCTTGAAGTATAAGATTTAGTGCGTTACAAGCTGGGA
CTGAATGGGTGACTTAGTCATGCATTTTAGGACCGCCTCCTCAGGAAGAG
GTGTGCGGTTTGTTTGGGTTTTTATACATGAAGCATACGGACATGAAATG
TGAAGGACGCATGATATAGTTACAGGACATAGATGATGCATATGAGTTAT
CCTTAGAGCGAGGAAGCAAGCAGTGATGGCTTGCGCTACGGCTTGTATCT
AGAGTCGAGTATATTTATCTATAATAATAAAAGTTGTTCATACATGCA back to topCoding sequence (CDS) from alignment at ch7:995424..997571+ >KJC3_009646-T1 ID=KJC3_009646-T1|Name=KJC3_009646-T1|organism=Aspergillus niger KJC3|type=CDS|length=5376bp|location=Sequence derived from alignment at ch7:995424..997571+ (Aspergillus niger KJC3)
ATGACCGACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTT
CGACGAAAAGACAATAAACAATGAGACCATCAAGGAAAAGAAATGGGGAA
TCCTGTCAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCT
CCAGATGGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGAT
CATCATGAATACCTGGGGCTACATGAATTCGTTTGGTATCTTTCAGACTT
ATTACGTCGATTTTCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGA
AGCGTTCAGGTCTTTATTGTCTTCTTTATTGGTACTTTTACTGGGAGGCT
TACAGATGCGGGCCACTTTCGGCCGGTTTTTGTTGTCGGAACCATCCTCA
GTGTCCTCGGCATGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTA
TTCCTCGCCCAAGGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTG
TCCAGCGCTGTCAGTAACTTCCACCTACTTCGCGAAACGCAAGATGCTCG
CCGTCGGCATCTGCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACA
GTAATGTTCCAGCACCTGATCCCACAGATTGGCTACGGATGGACGATGCG
AGTCTTCGGCTTCTTCACCCTAGCCTGTCTAATCATCTGCAACATTCTAG
CCAGACCGAGAGTGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCT
GCTTTCAAGGAACCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGAC
TTTCTGGGGTGTTTATTTCGCTTTTTATTATCTGAGCTCGTTCGGTGTTG
CCATCATCAAGATCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTG
AATGGTCTGGGTATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCG
GTATACCGGTCCGATGAATATTCTCATTGTCGTCACTCTGTTCTCCATCA
TTTGCGCTTTTGCCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCA
TGGACTGTGGTCTATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCC
CGCTACGTTGAGCAGCTTGACGACTGATTTGCAGAAAGCGGGTGTCAGGA
TGGGAATGATTTTCACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCT
ATCGCTGGTGTCTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCA
GCTCTTCGCGGCGTGCTCGATGCTCGTCGGCTTTTGTCTGCTCTGTGCGG
CTAGATTGGCGAGGACTGGAAAGGTCTTGAAGTATAAGATTTAGATGACC
GACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGA
AAAGACAATAAACAATGAGACCATCAAGGAAAAGAAATGGGGAATCCTGT
CAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCTCCAGAT
GGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGATCATCAT
GAATACCTGGGGCTACATGAATTCGTTTGGTATCTTTCAGACTTATTACG
TCGATTTTCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGAAGCGTT
CAGGTCTTTATTGTCTTCTTTATTGGTACTTTTACTGGGAGGCTTACAGA
TGCGGGCCACTTTCGGCCGGTTTTTGTTGTCGGAACCATCCTCAGTGTCC
TCGGCATGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTATTCCTC
GCCCAAGGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGC
GCTGTCAGTAACTTCCACCTACTTCGCGAAACGCAAGATGCTCGCCGTCG
GCATCTGCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACAGTAATG
TTCCAGCACCTGATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTT
CGGCTTCTTCACCCTAGCCTGTCTAATCATCTGCAACATTCTAGCCAGAC
CGAGAGTGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCTGCTTTC
AAGGAACCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTG
GGGTGTTTATTTCGCTTTTTATTATCTGAGCTCGTTCGGTGTTGCCATCA
TCAAGATCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTGAATGGT
CTGGGTATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATAC
CGGTCCGATGAATATTCTCATTGTCGTCACTCTGTTCTCCATCATTTGCG
CTTTTGCCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCATGGACT
GTGGTCTATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTAC
GTTGAGCAGCTTGACGACTGATTTGCAGAAAGCGGGTGTCAGGATGGGAA
TGATTTTCACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCTATCGCT
GGTGTCTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTT
CGCGGCGTGCTCGATGCTCGTCGGCTTTTGTCTGCTCTGTGCGGCTAGAT
TGGCGAGGACTGGAAAGGTCTTGAAGTATAAGATTTAGATGACCGACAAT
GGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGAAAAGAC
AATAAACAATGAGACCATCAAGGAAAAGAAATGGGGAATCCTGTCAAAAT
CACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCTCCAGATGGCGGA
GTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGATCATCATGAATAC
CTGGGGCTACATGAATTCGTTTGGTATCTTTCAGACTTATTACGTCGATT
TTCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGAAGCGTTCAGGTC
TTTATTGTCTTCTTTATTGGTACTTTTACTGGGAGGCTTACAGATGCGGG
CCACTTTCGGCCGGTTTTTGTTGTCGGAACCATCCTCAGTGTCCTCGGCA
TGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTATTCCTCGCCCAA
GGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTC
AGTAACTTCCACCTACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCT
GCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACAGTAATGTTCCAG
CACCTGATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTTCGGCTT
CTTCACCCTAGCCTGTCTAATCATCTGCAACATTCTAGCCAGACCGAGAG
TGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCTGCTTTCAAGGAA
CCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGT
TTATTTCGCTTTTTATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGA
TCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTGAATGGTCTGGGT
ATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCC
GATGAATATTCTCATTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTG
CCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCATGGACTGTGGTC
TATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAG
CAGCTTGACGACTGATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTT
TCACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCTATCGCTGGTGTC
TTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGGC
GTGCTCGATGCTCGTCGGCTTTTGTCTGCTCTGTGCGGCTAGATTGGCGA
GGACTGGAAAGGTCTTGAAGTATAAGATTTAGATGACCGACAATGGCAGG
GTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGAAAAGACAATAAA
CAATGAGACCATCAAGGAAAAGAAATGGGGAATCCTGTCAAAATCACAAA
GCGTCGCGAGTTGGAAAGATCCCGGTCCCCCTCCAGATGGCGGAGTTCTC
GCATGGACACAGGTCCTAGTGGGACACTTGATCATCATGAATACCTGGGG
CTACATGAATTCGTTTGGTATCTTTCAGACTTATTACGTCGATTTTCTCA
ATCGCTCGGATTCGGATGTTTCATGGATTGGAAGCGTTCAGGTCTTTATT
GTCTTCTTTATTGGTACTTTTACTGGGAGGCTTACAGATGCGGGCCACTT
TCGGCCGGTTTTTGTTGTCGGAACCATCCTCAGTGTCCTCGGCATGTTCA
TGGCCTCCATATCAACAGAGTATTACCAAGTATTCCTCGCCCAAGGAATC
TGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTCAGTAAC
TTCCACCTACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCTGCGCAT
GCGGCAGCGCCACAGGCGGCCTAATCTTCACAGTAATGTTCCAGCACCTG
ATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTTCGGCTTCTTCAC
CCTAGCCTGTCTAATCATCTGCAACATTCTAGCCAGACCGAGAGTGCCCC
CTCGGAAAACCGGCCCTCTTATTGAACTCGCTGCTTTCAAGGAACCATCA
TACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGTTTATTT
CGCTTTTTATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGATCTCTC
AGGAAGAATCGCTTACTTTCACGCTTATCTTGAATGGTCTGGGTATCATT
GGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCCGATGAA
TATTCTCATTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTGCCATGA
TTGGTGTCACTTCTATATCGGGGCTCTATGCATGGACTGTGGTCTATGGT
ATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAGCAGCTT
GACGACTGATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTTTCACTA
TCGTCAGTTTCGCTGTATTGACAGGTCCACCTATCGCTGGTGTCTTGATC
ACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGGCGTGCTC
GATGCTCGTCGGCTTTTGTCTGCTCTGTGCGGCTAGATTGGCGAGGACTG
GAAAGGTCTTGAAGTATAAGATTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009646-T1.utr3p1 | KJC3_009646-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:995424..997571 + |
|
