You are here

Home

KJC3_009668-T1, KJC3_009668-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009668-T1
Unique NameKJC3_009668-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1069826..1072527-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009668-T1 ID=KJC3_009668-T1|Name=KJC3_009668-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2702bp|location=Sequence derived from alignment at ch7:1069826..1072527- (Aspergillus niger KJC3)
ATCAACCGTTGGCAGTCGCGTGCCAAGGAAGCAAGTTCCGGTGGTTGTTT
GCCGAGACAGCCATTCATATTGGCTGCCTCGGCTAGATAAATGGAATCTT
CTCTCAGGAACAACCGATGCCCCAGTTTCCGCAGTTCTGGCGATAAAACA
ATGCACCCCAGCTTCCGCCAGTACCGATTTGGACTGTATATGCTCCATCT
ATGGCAGTTTCTGTCATTCGACTGAAAGGATTGTTCTTCCGGCCATGCCG
AATAACTAATAGCCCCAAGGCCAAATTTCTCGGCCACCTCTCTTGGCAGC
CATGAAGGTTTTAAAAAGGGCTGCTGCCTTCCCCGGTGGGTTGTTCTTGC
GTGCACTGGGTAGCCAAAGTCTGTGACAATGCAGCTTCAATTCATCGTGG
GCTCTTTGCTTCTCTTTGGCTCTGCTTCGGCAGCCCCAGCTCCGCCAGCA
GATGCAAGATCCCACCCCAGCATTGATTCTCTGGGTACCCTCCAAGCTCT
GAAGTATAACAACTTGGGCCCAGGAAACAACGGCACCGCCGCAGTCTTGG
TCTACGATCGACTGCCATACCTCAGCGCAGAATCTAGGTGTGCATCCATT
GGCGAAGCCCTCTATCCGCTGCAGGATGTATCACAAGCCAACGCCACAGA
GATAGGGTACCAGCTCGACTATCTGGTTTACGCGAAAGATGTGGCGGCAA
ATAGCTCCTTTTGGATAGCCAAGGGCTCACCGAATGGCTGCCAGGCATAC
TCTCACAGCCGTAAGCAAGTCATTCCCGCTCCATGTGATCGACAACTCCC
TGCCCTTTGCACCTCCAGCGTCCCTCCCACTACCGACAAGGACAGGGAAG
CCGTGAACAAGTCCAAGATCTCTATCTCATTCGATGATTACCGTATGACT
GGCTATCGTGATGGGCGCTCGTTTCGGTTCCTAGGCATTCCCTTCGCAGA
CCCGCCTGTAAGGGATTTGCGATTCGCACCCCCGCGCCCCTACTCAGGTC
CCAAGAAAATTGACGCGACTAAAATGGCGGACTCATGCATTCAATCGGTT
TCGGGCTTTGGAACACTCGACAATGGGGGTATCTCGGAGGACTGTCTATA
CCTGAACGTCTATTCTCCTGTCCTGCCCTCTTCACATGACAGGAACTCCA
CCCGCAAGCCTGTCGCGGTATACTTCTACGGTGGTGCGTTCACCAGTGGA
ACGGCGTCCATGGTTGATTACGATGGAGGGAATTTCGCCAGCCGTAACGA
CGTTGTTGTTGTAACAGTCAACTACCGAGTCGGTGCTCTAGGGTGGCTGA
CCACGGGCAACCTCACCACCGGCAACTATGGTACACGCGACCAGATACTT
GCATTGAAATGGGTCAACAAGTATATCGAAGCATTTGGTGGAGATCCAAA
CCATGTCACAATCTTGGGTCAATCCGCCGGAGGTCAGAGCGTGATTGCGT
TGCTCTCTTCGACTGCAGCCCACGGCCTATTCTCTGGTGCCATTGTGCAG
TCCGCCCCCGTAGACCTTCCCTGGTTCACACGTGAAGTTTATACCAAGAT
TGTTACTCCCAACATCGCGGGGGCTGTTGGCTGCAACGGCACCACATCGG
AAACCGCCCTCATCTCCTGCCTGAGATCAGTTCCGGCAACCCGGTACCTG
GACAACACTACTGAGTTCGAAGCTGCCATGACAGCCTCCACCGAGACCAT
CGCCAGCGATTGGCTGCATTCATCTGAGATCCTCGCATCGATCGAGCCCC
TGATGCCCATAGTAGATGACATCGGCAGTGGCGTCATTGACGACCAGTTC
TACCGTCTTCTTGCTTCGGACAGGCTACCCAACCGCGTTCCAACCATGTT
CACAACAGTCACTACCGAGGCTGCTCTCTACGTTGATCAGTATGTCCCGA
ACCTTGGGGCAAGCGAAGCTGCTCTTGAGCTCGTCTACAGCTATGCCTAT
CCCACGTCACTCATCAAGTCCCTCATCGCCACCGACGCCTTTCCTCTGAA
CGCCTCGGACTCTGACAGTGTCCGGAATACTGTTGCGGACGCGCTCACCC
ACAGCGAGTGGAGCTGTCCTCAGGCATATCTCCTCCGCCATGGCGGCCGA
CATGCGTTCCCGCGCCTCTGGGAAGTTGAAGTCAGACACGGTCACGTCCA
AACCACCGTGGATGTCCCCAGCATCTGCTCCCCCAACACTGATTTCAACG
CCACGTGCCACTCCGCAGATGTGCTTCCTGCCTGGGGCACTCTCAACAGC
AAGACGAAGAATGTATCCCCATACTACAACAAACGGGACATCCTGCATTC
CCGTCTCCTCAACGACATCTTCGGTTCATTCTTCCGCACCCGCAATCCCA
ACCCCGATCTGGAGATGCTGAAGCTTCGTGGGCCCGCCTATGCATCGACT
TATCAGATCTTCGGTCCTCGCGGATACTACATGCCCGAGTATGAAATCGC
GGAGCGAAATGTGAGTGTTCTGGACATGCCGCCGTCGATTGTGGCGAATC
CAGGTGTTACGGAGAAGTGTGCCGTGTTCGAAGACTTTGGGTTCAGCTTC
CAGAGAGCCAATCTTACTGTCTAAGTCTGCGGGATGGAGAATATGTATAG
AGATACTTTCTGACACATGGAAGCGGAAGTCAGTATGTATATAGTAGTAG
AAGGATCATACTACATTTGGATAATTTAATTGTAAACCCATGTTCTAAAG
GC
back to top

Coding sequence (CDS) from alignment at ch7:1069826..1072527-

>KJC3_009668-T1 ID=KJC3_009668-T1|Name=KJC3_009668-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch7:1069826..1072527- (Aspergillus niger KJC3)
ATGACTGGCTATCGTGATGGGCGCTCGTTTCGGTTCCTAGGCATTCCCTT
CGCAGACCCGCCTGTAAGGGATTTGCGATTCGCACCCCCGCGCCCCTACT
CAGGTCCCAAGAAAATTGACGCGACTAAAATGGCGGACTCATGCATTCAA
TCGGTTTCGGGCTTTGGAACACTCGACAATGGGGGTATCTCGGAGGACTG
TCTATACCTGAACGTCTATTCTCCTGTCCTGCCCTCTTCACATGACAGGA
ACTCCACCCGCAAGCCTGTCGCGGTATACTTCTACGGTGGTGCGTTCACC
AGTGGAACGGCGTCCATGGTTGATTACGATGGAGGGAATTTCGCCAGCCG
TAACGACGTTGTTGTTGTAACAGTCAACTACCGAGTCGGTGCTCTAGGGT
GGCTGACCACGGGCAACCTCACCACCGGCAACTATGGTACACGCGACCAG
ATACTTGCATTGAAATGGGTCAACAAGTATATCGAAGCATTTGGTGGAGA
TCCAAACCATGTCACAATCTTGGGTCAATCCGCCGGAGGTCAGAGCGTGA
TTGCGTTGCTCTCTTCGACTGCAGCCCACGGCCTATTCTCTGGTGCCATT
GTGCAGTCCGCCCCCGTAGACCTTCCCTGGTTCACACGTGAAGTTTATAC
CAAGATTGTTACTCCCAACATCGCGGGGGCTGTTGGCTGCAACGGCACCA
CATCGGAAACCGCCCTCATCTCCTGCCTGAGATCAGTTCCGGCAACCCGG
TACCTGGACAACACTACTGAGTTCGAAGCTGCCATGACAGCCTCCACCGA
GACCATCGCCAGCGATTGGCTGCATTCATCTGAGATCCTCGCATCGATCG
AGCCCCTGATGCCCATAGTAGATGACATCGGCAGTGGCGTCATTGACGAC
CAGTTCTACCGTCTTCTTGCTTCGGACAGGCTACCCAACCGCGTTCCAAC
CATGTTCACAACAGTCACTACCGAGGCTGCTCTCTACGTTGATCAGTATG
TCCCGAACCTTGGGGCAAGCGAAGCTGCTCTTGAGCTCGTCTACAGCTAT
GCCTATCCCACGTCACTCATCAAGTCCCTCATCGCCACCGACGCCTTTCC
TCTGAACGCCTCGGACTCTGACAGTGTCCGGAATACTGTTGCGGACGCGC
TCACCCACAGCGAGTGGAGCTGTCCTCAGGCATATCTCCTCCGCCATGGC
GGCCGACATGCGTTCCCGCGCCTCTGGGAAGTTGAAGTCAGACACGGTCA
CGTCCAAACCACCGTGGATGTCCCCAGCATCTGCTCCCCCAACACTGATT
TCAACGCCACGTGCCACTCCGCAGATGTGCTTCCTGCCTGGGGCACTCTC
AACAGCAAGACGAAGAATGTATCCCCATACTACAACAAACGGGACATCCT
GCATTCCCGTCTCCTCAACGACATCTTCGGTTCATTCTTCCGCACCCGCA
ATCCCAACCCCGATCTGGAGATGCTGAAGCTTCGTGGGCCCGCCTATGCA
TCGACTTATCAGATCTTCGGTCCTCGCGGATACTACATGCCCGAGTATGA
AATCGCGGAGCGAAATGTGAGTGTTCTGGACATGCCGCCGTCGATTGTGG
CGAATCCAGGTGTTACGGAGAAGTGTGCCGTGTTCGAAGACTTTGGGTTC
AGCTTCCAGAGAGCCAATCTTACTGTCTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009668KJC3_009668Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009668-T1KJC3_009668-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009668-T1.cdsKJC3_009668-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009668-T1.utr3p1KJC3_009668-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009668-T1.exon2KJC3_009668-T1.exon2Aspergillus niger KJC3exon
KJC3_009668-T1.exon1KJC3_009668-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009668-T1.utr5p2KJC3_009668-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009668-T1.utr5p1KJC3_009668-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0033235
DBxrefInterPro:IPR019819
DBxrefInterPro:IPR019826
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR002018
DBxrefPFAM:PF00135
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1069826..1072527 -
Powered by Drupal