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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1076402..1078889- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009669-T1 ID=KJC3_009669-T1|Name=KJC3_009669-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2488bp|location=Sequence derived from alignment at ch7:1076402..1078889- (Aspergillus niger KJC3)
CCTCTCTTGAACCCCCGCGATAACCTTCTTTAAACTCCCAACCTATTCAA
CTCCCATCATCTTCCTTCTGTACTGATACTCAACGATGGCACCAAGCGGG
CTTAATGGGTGGCGGTTGCCAGCCTATGAGCCGCTACACAATGAGCTTGA
GCCACACGAGACTGAACAGGCGATGTCCTCATCTGCCGCAATCAGGGAGG
AGACCGGAGAGCTCGACGACCACGAAGAGACGATGCCAGGCAACATTTCA
CAGTCTTCAAACTCTTCCAGCAGGGATGAAGCATCGTGCTCTGGATCAAC
TTCCGATACGGCGACCATGCGAGGCTCAGCTGAGGACAAACCTCCGGAGT
CCAATGTCAGCGCACCAGAGCCAAAAGATGCTTCAGACCGGTTTACCTTT
GAATTGGCTGGGGTCGTCGTCTCAGCCGGTCTACTTGCTACGATGCTGGC
CCTTCTGAGTGTTTACGATCACCAGCCCCAACCGAGCTGGCCGCATATCT
CGTTGAACGCGGTCATCTCTACCCTCAGTACTCTCTCCAAAGCGAGTCTT
ATATTCTCCGTGGGTGAGTCATTGGGACAATTGAAGTGGGTGTGGTTTAG
TCAACAAAAGAGACCACTACTTCACCTGCGATTGTTCGATTCGGCCAGTC
GGGGAGCTTGGGGGAGTTTAAGACTAGTTTGGCACCAACGTGCCCAACAT
TTCGCAGGGTTAGGTGCTGTTGTTATGATTTTAGCCTTGGCATTTGACCC
ATTCTCGCAGAACCTCATACACAACTACGTTAAAATGGTAGCAGATCCAT
CAGGGACGGCACGGATCGGAACTGTCTCGATATACAATACTATCGGGTCC
GATATGGCGACTAGTTGTATGTTTACGCCAAACCCCAGTCCAGACACGCA
GTCAAGACTAACAGAAAGCGAACCCATAAGTCTTTGAGGTTGACCCTGCA
CTAAAGGGAAATGTTTACAATTCGCTTTTCAATAACGATCAAAGCCGACC
TTGGGAAATCCCAAAGTTTGTCTGCACGTCCAGTAACTGTACCTGGGATG
AACCCGTGGCATCCCTGGAATTCCGGACTCTTTGCACCAACGTCACCAGC
GCTTTGATACCCAACTGCACGACTTTTCCCGCTAACTCATCCTACGCCGG
TCAGACAAACTGCACGTTTACCCTTCCCAAATCCAACACCTCCGCCTGGT
ATCTCCCAAATTCCCCCGTGATGACCCCGTTCTCGGTTGCCGGAGTGCCG
CCCACCGACGCGGAGGTTTATACAAATGCCAGCCTGATCGTGATTCAGTA
TATAGCTCCACAGCACGCGAATGTTAGCCTCTTCGAGGGCGGGCTCCTCC
CGAATGGGACTCTGTGGGAGGCGACCGAATGTCTTCTGGATCCTATCGTG
CGTAGCTTCCGCCCAGCCGTCCATCAAAACACCTACAGTGAGGAGACACT
TGCCATCTGGACGCAGAGCAACTTTGTCACTGTCGACAATGCCAACGTCA
CTGCTGGAAATACGCTTACGCCTCCGGGCACTTGGGTGGCCGACTACGGC
GTCCCTGTGAATCAAAGCAGCCCGCAGAACAACAGCGCCCAGTCCTATGT
GCTCGGTTTTAACGCCGGCAAAACAATAGAGACATTTTTTCAAGCCATCT
TTTCCGGCCAGTCGAGCCGCAGCGTCCTACACACAGTGTTTACCCCCACA
TTCAATAACTATGCTGCGTCCGATACCCTCGAGGCGCTGGGGTGGGGCAA
TATCACCGGGTGCAGCGATCTCCTCGCCGACCGACTCCCCTGTGCTATGG
GCAATGTGGCCGCGGCGATGACCAAGACCCTACGCGACTCGGCGTACATC
GCTGACCCCCGGTCGACCTCGGGCTGGGCCGTGGGCAACGCGATGATGCC
CGCGGTTTATATCGCCGTGCATTGGCAGTGGGTGGTTCTGCCGTTGGTCG
TTTGGGTCGCAGGGGCGACGCTCGTGGGTGGCACACTCTGGAAGACCCAG
CGCGCGCGAGCGCCTGCTTGGAGGAATGATACACTGCCCTTGCTGTTTTT
GTATAAGAGCGAGGAAGGGCTGTTGCGACCCGACGGCAGACTGGCGGGAC
CGGGAAGGGAGCTTTGCATGGCTAGACTCTATGAGAACGAGGGTCGAGTG
TTTCTTGGTCAGTGGACAGAGAGCGACAGACTTCATGATAATGATGAAAG
ATAGAGTGAACTTTACAGGTATATTCTAACACCACTACGAAAAGCCCCGA
CATTCAGGATCTTAATAGTCTGACTTGTTCAATTGTCAAGTACTACGCGC
ATCTGAGCTTTAGGACATCAATCCATCTATATCTTGAGGTTGACCCTTTT
TTTCCTTGTGATCCTACGTATTCAACCAAGCCGCTTGTTCTTTTCCCATC
TCCTTCTATTAGGGATAATCATGGTAATGGTAACTATCCCAACAATACTC
AATCTATATGATTATACTATATAGAATAGAGCCAGCTC back to topCoding sequence (CDS) from alignment at ch7:1076402..1078889- >KJC3_009669-T1 ID=KJC3_009669-T1|Name=KJC3_009669-T1|organism=Aspergillus niger KJC3|type=CDS|length=4110bp|location=Sequence derived from alignment at ch7:1076402..1078889- (Aspergillus niger KJC3)
TCTTTGAGGTTGACCCTGCACTAAAGGGAAATGTTTACAATTCGCTTTTC
AATAACGATCAAAGCCGACCTTGGGAAATCCCAAAGTTTGTCTGCACGTC
CAGTAACTGTACCTGGGATGAACCCGTGGCATCCCTGGAATTCCGGACTC
TTTGCACCAACGTCACCAGCGCTTTGATACCCAACTGCACGACTTTTCCC
GCTAACTCATCCTACGCCGGTCAGACAAACTGCACGTTTACCCTTCCCAA
ATCCAACACCTCCGCCTGGTATCTCCCAAATTCCCCCGTGATGACCCCGT
TCTCGGTTGCCGGAGTGCCGCCCACCGACGCGGAGGTTTATACAAATGCC
AGCCTGATCGTGATTCAGTATATAGCTCCACAGCACGCGAATGTTAGCCT
CTTCGAGGGCGGGCTCCTCCCGAATGGGACTCTGTGGGAGGCGACCGAAT
GTCTTCTGGATCCTATCGTGCGTAGCTTCCGCCCAGCCGTCCATCAAAAC
ACCTACAGTGAGGAGACACTTGCCATCTGGACGCAGAGCAACTTTGTCAC
TGTCGACAATGCCAACGTCACTGCTGGAAATACGCTTACGCCTCCGGGCA
CTTGGGTGGCCGACTACGGCGTCCCTGTGAATCAAAGCAGCCCGCAGAAC
AACAGCGCCCAGTCCTATGTGCTCGGTTTTAACGCCGGCAAAACAATAGA
GACATTTTTTCAAGCCATCTTTTCCGGCCAGTCGAGCCGCAGCGTCCTAC
ACACAGTGTTTACCCCCACATTCAATAACTATGCTGCGTCCGATACCCTC
GAGGCGCTGGGGTGGGGCAATATCACCGGGTGCAGCGATCTCCTCGCCGA
CCGACTCCCCTGTGCTATGGGCAATGTGGCCGCGGCGATGACCAAGACCC
TACGCGACTCGGCGTACATCGCTGACCCCCGGTCGACCTCGGGCTGGGCC
GTGGGCAACGCGATGATGCCCGCGGTTTATATCGCCGTGCATTGGCAGTG
GGTGGTTCTGCCGTTGGTCGTTTGGGTCGCAGGGGCGACGCTCGTGGGTG
GCACACTCTGGAAGACCCAGCGCGCGCGAGCGCCTGCTTGGAGGAATGAT
ACACTGCCCTTGCTGTTTTTGTATAAGAGCGAGGAAGGGCTGTTGCGACC
CGACGGCAGACTGGCGGGACCGGGAAGGGAGCTTTGCATGGCTAGACTCT
ATGAGAACGAGGGTCGAGTGTTTCTTGGTCAGTGGACAGAGAGCGACAGA
CTTCATGATAATGATGAAAGATAGATGGCACCAAGCGGGCTTAATGGGTG
GCGGTTGCCAGCCTATGAGCCGCTACACAATGAGCTTGAGCCACACGAGA
CTGAACAGGCGATGTCCTCATCTGCCGCAATCAGGGAGGAGACCGGAGAG
CTCGACGACCACGAAGAGACGATGCCAGGCAACATTTCACAGTCTTCAAA
CTCTTCCAGCAGGGATGAAGCATCGTGCTCTGGATCAACTTCCGATACGG
CGACCATGCGAGGCTCAGCTGAGGACAAACCTCCGGAGTCCAATGTCAGC
GCACCAGAGCCAAAAGATGCTTCAGACCGGTTTACCTTTGAATTGGCTGG
GGTCGTCGTCTCAGCCGGTCTACTTGCTACGATGCTGGCCCTTCTGAGTG
TTTACGATCACCAGCCCCAACCGAGCTGGCCGCATATCTCGTTGAACGCG
GTCATCTCTACCCTCAGTACTCTCTCCAAAGCGAGTCTTATATTCTCCGT
GGGTGAGTCATTGGGACAATTGAAGTGGGTGTGGTTTAGTCAACAAAAGA
GACCACTACTTCACCTGCGATTGTTCGATTCGGCCAGTCGGGGAGCTTGG
GGGAGTTTAAGACTAGTTTGGCACCAACGTGCCCAACATTTCGCAGGGTT
AGGTGCTGTTGTTATGATTTTAGCCTTGGCATTTGACCCATTCTCGCAGA
ACCTCATACACAACTACGTTAAAATGGTAGCAGATCCATCAGGGACGGCA
CGGATCGGAACTGTCTCGATATACAATACTATCGGGTCCGATATGGCGAC
TAGTTTCTTTGAGGTTGACCCTGCACTAAAGGGAAATGTTTACAATTCGC
TTTTCAATAACGATCAAAGCCGACCTTGGGAAATCCCAAAGTTTGTCTGC
ACGTCCAGTAACTGTACCTGGGATGAACCCGTGGCATCCCTGGAATTCCG
GACTCTTTGCACCAACGTCACCAGCGCTTTGATACCCAACTGCACGACTT
TTCCCGCTAACTCATCCTACGCCGGTCAGACAAACTGCACGTTTACCCTT
CCCAAATCCAACACCTCCGCCTGGTATCTCCCAAATTCCCCCGTGATGAC
CCCGTTCTCGGTTGCCGGAGTGCCGCCCACCGACGCGGAGGTTTATACAA
ATGCCAGCCTGATCGTGATTCAGTATATAGCTCCACAGCACGCGAATGTT
AGCCTCTTCGAGGGCGGGCTCCTCCCGAATGGGACTCTGTGGGAGGCGAC
CGAATGTCTTCTGGATCCTATCGTGCGTAGCTTCCGCCCAGCCGTCCATC
AAAACACCTACAGTGAGGAGACACTTGCCATCTGGACGCAGAGCAACTTT
GTCACTGTCGACAATGCCAACGTCACTGCTGGAAATACGCTTACGCCTCC
GGGCACTTGGGTGGCCGACTACGGCGTCCCTGTGAATCAAAGCAGCCCGC
AGAACAACAGCGCCCAGTCCTATGTGCTCGGTTTTAACGCCGGCAAAACA
ATAGAGACATTTTTTCAAGCCATCTTTTCCGGCCAGTCGAGCCGCAGCGT
CCTACACACAGTGTTTACCCCCACATTCAATAACTATGCTGCGTCCGATA
CCCTCGAGGCGCTGGGGTGGGGCAATATCACCGGGTGCAGCGATCTCCTC
GCCGACCGACTCCCCTGTGCTATGGGCAATGTGGCCGCGGCGATGACCAA
GACCCTACGCGACTCGGCGTACATCGCTGACCCCCGGTCGACCTCGGGCT
GGGCCGTGGGCAACGCGATGATGCCCGCGGTTTATATCGCCGTGCATTGG
CAGTGGGTGGTTCTGCCGTTGGTCGTTTGGGTCGCAGGGGCGACGCTCGT
GGGTGGCACACTCTGGAAGACCCAGCGCGCGCGAGCGCCTGCTTGGAGGA
ATGATACACTGCCCTTGCTGTTTTTGTATAAGAGCGAGGAAGGGCTGTTG
CGACCCGACGGCAGACTGGCGGGACCGGGAAGGGAGCTTTGCATGGCTAG
ACTCTATGAGAACGAGGGTCGAGTGTTTCTTGGTCAGTGGACAGAGAGCG
ACAGACTTCATGATAATGATGAAAGATAGATGGCACCAAGCGGGCTTAAT
GGGTGGCGGTTGCCAGCCTATGAGCCGCTACACAATGAGCTTGAGCCACA
CGAGACTGAACAGGCGATGTCCTCATCTGCCGCAATCAGGGAGGAGACCG
GAGAGCTCGACGACCACGAAGAGACGATGCCAGGCAACATTTCACAGTCT
TCAAACTCTTCCAGCAGGGATGAAGCATCGTGCTCTGGATCAACTTCCGA
TACGGCGACCATGCGAGGCTCAGCTGAGGACAAACCTCCGGAGTCCAATG
TCAGCGCACCAGAGCCAAAAGATGCTTCAGACCGGTTTACCTTTGAATTG
GCTGGGGTCGTCGTCTCAGCCGGTCTACTTGCTACGATGCTGGCCCTTCT
GAGTGTTTACGATCACCAGCCCCAACCGAGCTGGCCGCATATCTCGTTGA
ACGCGGTCATCTCTACCCTCAGTACTCTCTCCAAAGCGAGTCTTATATTC
TCCGTGGGTGAGTCATTGGGACAATTGAAGTGGGTGTGGTTTAGTCAACA
AAAGAGACCACTACTTCACCTGCGATTGTTCGATTCGGCCAGTCGGGGAG
CTTGGGGGAGTTTAAGACTAGTTTGGCACCAACGTGCCCAACATTTCGCA
GGGTTAGGTGCTGTTGTTATGATTTTAGCCTTGGCATTTGACCCATTCTC
GCAGAACCTCATACACAACTACGTTAAAATGGTAGCAGATCCATCAGGGA
CGGCACGGATCGGAACTGTCTCGATATACAATACTATCGGGTCCGATATG
GCGACTAGTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009669-T1.utr5p1 | KJC3_009669-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021514 |
| DBxref | PFAM:PF11374 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1076402..1078889 - |
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