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KJC3_009672-T1, KJC3_009672-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009672-T1
Unique NameKJC3_009672-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1084308..1085812+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009672-T1 ID=KJC3_009672-T1|Name=KJC3_009672-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1505bp|location=Sequence derived from alignment at ch7:1084308..1085812+ (Aspergillus niger KJC3)
ATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAA
CGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGG
CTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAAC
TCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGA
TGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGG
TGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGTACTATC
TACCGCACTGGCACCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTC
CGACTTTGAGTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTG
GATATGTGTACCATCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGA
CTCCAGGATGTGAGTAATTTCGCGGTTCATGATATTATCCTGGTGGACGC
GCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACA
ACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTG
TGGGGTAGCAACATCTGGGTCCACGATGTATGTCCCACGTTATGTCACAA
TAGAAAGCGCTCAGTGCTGACCCATGTATCCAGGTCGAGGTGACCAACAA
GGATGAATGTGTCACGGTCAAGGTAAGGGCCATCTGGTATGATCACCCCT
AGCTCGTGTACTGACAATCCGCAGAGCCCTGCCAACAACATCCTTGTGGA
AAGTATCTACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCG
CGGACACCGATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGT
TCCAACCAGATGTACATGATCAAGAGCAACGGCGGCAGCGGGACAGTCAA
TAACACCCTTCTGGAGAACTTCATTGGTATGTCTGACCCACTCAAACGAG
GTATATATAGCCTCTGACTAATGTGGTTGCAGGACGCGGCAACGCTTATT
CTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTGGATGGCGAC
GGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGGAACGGAGGC
GGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCC
CTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGC
GATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGGATTTTGCCT
TGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGACTGTCACCA
CGGCGCCCTCAGGATATTCGGCAACCACAATGGCAGCAGATCTCACCACG
GACTTTGGCACGACCGCGTCCATTCCCATCCCTACCATCCCGACTTCCTT
CTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGG
CTTGA
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Coding sequence (CDS) from alignment at ch7:1084308..1085812+

>KJC3_009672-T1 ID=KJC3_009672-T1|Name=KJC3_009672-T1|organism=Aspergillus niger KJC3|type=CDS|length=5364bp|location=Sequence derived from alignment at ch7:1084308..1085812+ (Aspergillus niger KJC3)
ATGCCTGCTCTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAA
CGGCCAGCTCTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGG
CTGCGACCAAGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAAC
TCCACCGACATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGA
TGGAGGTCTGATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGG
TGTCTCTGTCGGGAGGCAAGGCGACCGCCATCATATTAGACGGTACTATC
TACCGCACTGGCACCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTC
CGACTTTGAGTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTG
GATATGTGTACCATCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGA
CTCCAGGATGTGAGTAATTTCGCGGTTCATGATATTATCCTGGTGGACGC
GCCGGCTTTCCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACA
ACATGGCCATTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTG
TGGGGTAGCAACATCTGGGTCCACGATGTCGAGGTGACCAACAAGGATGA
ATGTGTCACGGTCAAGAGCCCTGCCAACAACATCCTTGTGGAAAGTATCT
ACTGCAACTGGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACC
GATATCACTGATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCA
GATGTACATGATCAAGAGCAACGGCGGCAGCGGGACAGTCAATAACACCC
TTCTGGAGAACTTCATTGGACGCGGCAACGCTTATTCTCTGGACGTTGAC
AGCTACTGGAGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAACTGAG
CAACATCACGTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGCCGAAC
GCGGGCCCATCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCGACATC
ACCATCGAGGATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAGACCTA
CACCTGCGAGTCGGCGTATGGCGATGGATTTTGCCTTGAAGACAGCGATT
CCACCACCTCGTACACGACCACCCAGACTGTCACCACGGCGCCCTCAGGA
TATTCGGCAACCACAATGGCAGCAGATCTCACCACGGACTTTGGCACGAC
CGCGTCCATTCCCATCCCTACCATCCCGACTTCCTTCTATCCCGGCTTGA
CGGCGATCAGTCCGTTGGCATCGGCTGCCACCACGGCTTGAATGCCTGCT
CTTCCCATCCTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCT
CTCCGGTAGCGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCA
AGACGTGTAACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGAC
ATTGGGTCCGCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCT
GATCTATATTCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGT
CGGGAGGCAAGGCGACCGCCATCATATTAGACGGTACTATCTACCGCACT
GGCACCGACGGAGGTAATATGATTCTGGTGGAGAACTCTTCCGACTTTGA
GTTGTACAGCAACTCGTCCTCCGGTGCCGTCCAGGGATTTGGATATGTGT
ACCATCGGGAAGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGAT
GTGAGTAATTTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTT
CCACTTCGTCATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCA
TTCGCGGTGGTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGC
AACATCTGGGTCCACGATGTCGAGGTGACCAACAAGGATGAATGTGTCAC
GGTCAAGAGCCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACT
GGAGTGGAGGTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACT
GATATTCTGTACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACAT
GATCAAGAGCAACGGCGGCAGCGGGACAGTCAATAACACCCTTCTGGAGA
ACTTCATTGGACGCGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGG
AGCAGCATGACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCAC
GTTCAAGAACTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCA
TCAAGGTGGTATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAG
GATTTTGCCATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGA
GTCGGCGTATGGCGATGGATTTTGCCTTGAAGACAGCGATTCCACCACCT
CGTACACGACCACCCAGACTGTCACCACGGCGCCCTCAGGATATTCGGCA
ACCACAATGGCAGCAGATCTCACCACGGACTTTGGCACGACCGCGTCCAT
TCCCATCCCTACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCA
GTCCGTTGGCATCGGCTGCCACCACGGCTTGAATGCCTGCTCTTCCCATC
CTCGCCCTTGCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCCGGTAG
CGTCGGTCCGCTCACTTCGGCACACTCCAAGGCTGCGACCAAGACGTGTA
ACGTGCTGGACTATGGTGCTGTGGCGGACAACTCCACCGACATTGGGTCC
GCCCTCTCAGAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATCTATAT
TCCTCCTGGTGATTATGCGATGGATACCTGGGTGTCTCTGTCGGGAGGCA
AGGCGACCGCCATCATATTAGACGGTACTATCTACCGCACTGGCACCGAC
GGAGGTAATATGATTCTGGTGGAGAACTCTTCCGACTTTGAGTTGTACAG
CAACTCGTCCTCCGGTGCCGTCCAGGGATTTGGATATGTGTACCATCGGG
AAGGTGATCTTGATGGGCCACGGATTTTGCGACTCCAGGATGTGAGTAAT
TTCGCGGTTCATGATATTATCCTGGTGGACGCGCCGGCTTTCCACTTCGT
CATGGACGACTGCTCCGATGGGGAGGTGTACAACATGGCCATTCGCGGTG
GTAACTCCGGCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACATCTGG
GTCCACGATGTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGAG
CCCTGCCAACAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAG
GTTGTGCGATGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTG
TACCGCAACGTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAG
CAACGGCGGCAGCGGGACAGTCAATAACACCCTTCTGGAGAACTTCATTG
GACGCGGCAACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATG
ACAGCCGTGGATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAA
CTGGAAGGGAACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGG
TATGCTCAGACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCC
ATGTGGACCGAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTA
TGGCGATGGATTTTGCCTTGAAGACAGCGATTCCACCACCTCGTACACGA
CCACCCAGACTGTCACCACGGCGCCCTCAGGATATTCGGCAACCACAATG
GCAGCAGATCTCACCACGGACTTTGGCACGACCGCGTCCATTCCCATCCC
TACCATCCCGACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGG
CATCGGCTGCCACCACGGCTTGAATGCCTGCTCTTCCCATCCTCGCCCTT
GCCCTCGCCCCGTTGCTGGTCAACGGCCAGCTCTCCGGTAGCGTCGGTCC
GCTCACTTCGGCACACTCCAAGGCTGCGACCAAGACGTGTAACGTGCTGG
ACTATGGTGCTGTGGCGGACAACTCCACCGACATTGGGTCCGCCCTCTCA
GAAGCCTGGGATGCGTGCTCGGATGGAGGTCTGATCTATATTCCTCCTGG
TGATTATGCGATGGATACCTGGGTGTCTCTGTCGGGAGGCAAGGCGACCG
CCATCATATTAGACGGTACTATCTACCGCACTGGCACCGACGGAGGTAAT
ATGATTCTGGTGGAGAACTCTTCCGACTTTGAGTTGTACAGCAACTCGTC
CTCCGGTGCCGTCCAGGGATTTGGATATGTGTACCATCGGGAAGGTGATC
TTGATGGGCCACGGATTTTGCGACTCCAGGATGTGAGTAATTTCGCGGTT
CATGATATTATCCTGGTGGACGCGCCGGCTTTCCACTTCGTCATGGACGA
CTGCTCCGATGGGGAGGTGTACAACATGGCCATTCGCGGTGGTAACTCCG
GCGGCTTGGATGGGATTGATGTGTGGGGTAGCAACATCTGGGTCCACGAT
GTCGAGGTGACCAACAAGGATGAATGTGTCACGGTCAAGAGCCCTGCCAA
CAACATCCTTGTGGAAAGTATCTACTGCAACTGGAGTGGAGGTTGTGCGA
TGGGATCTCTCGGCGCGGACACCGATATCACTGATATTCTGTACCGCAAC
GTTTACACCTGGAGTTCCAACCAGATGTACATGATCAAGAGCAACGGCGG
CAGCGGGACAGTCAATAACACCCTTCTGGAGAACTTCATTGGACGCGGCA
ACGCTTATTCTCTGGACGTTGACAGCTACTGGAGCAGCATGACAGCCGTG
GATGGCGACGGTGTGCAACTGAGCAACATCACGTTCAAGAACTGGAAGGG
AACGGAGGCGGATGGCGCCGAACGCGGGCCCATCAAGGTGGTATGCTCAG
ACACGGCCCCTTGCACCGACATCACCATCGAGGATTTTGCCATGTGGACC
GAAAGCGGCGATGAGCAGACCTACACCTGCGAGTCGGCGTATGGCGATGG
ATTTTGCCTTGAAGACAGCGATTCCACCACCTCGTACACGACCACCCAGA
CTGTCACCACGGCGCCCTCAGGATATTCGGCAACCACAATGGCAGCAGAT
CTCACCACGGACTTTGGCACGACCGCGTCCATTCCCATCCCTACCATCCC
GACTTCCTTCTATCCCGGCTTGACGGCGATCAGTCCGTTGGCATCGGCTG
CCACCACGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009672KJC3_009672Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009672-T1.exon1KJC3_009672-T1.exon1Aspergillus niger KJC3exon
KJC3_009672-T1.exon2KJC3_009672-T1.exon2Aspergillus niger KJC3exon
KJC3_009672-T1.exon3KJC3_009672-T1.exon3Aspergillus niger KJC3exon
KJC3_009672-T1.exon4KJC3_009672-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009672-T1.cdsKJC3_009672-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009672-T1KJC3_009672-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1084308..1085812 +
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