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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1096702..1099228- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009677-T1 ID=KJC3_009677-T1|Name=KJC3_009677-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2527bp|location=Sequence derived from alignment at ch7:1096702..1099228- (Aspergillus niger KJC3)
TCAACTTCCTTCTTCTATCCTCCTAACTGTTCGTTCTCTTCCAAGATGTC
TGCCCCCTCATACATGGCAGACCCTCTTACAGTTTTACCACCCGAGATCG
TCTTGCGCGTCGTGGAATTCCTCCCGGTCTCCGCCGTAGCGTCGCTGACC
GCCGTCTCCAAGCCCTGGCACCAATTCATCGACATCACCCATCGAGAAGC
TATCTACAGTTCCGAATCGAAAACCACCCAACCTCCGGGTGGCGCCCGCG
ACTTTTCATTTTTGTCGAACAGCACCACCTCCTTTACCAAATTATTTGAG
AACACTACATCATGGAAAGATCTATGCAAGCGCCAGAAGCTGCTCGCCCG
CAATTGGGCCGGCGAGCGCCCAGTGACCCGCGAGTCGGTGCTTCAAGTCG
GCAACAATCCTGTCTGGCGATTCCGGGCAGACTTTAAGCGCCGGTTCTTC
ATTTCAACATCACACGCGGGTGGTCTGAATGTTACGGATATGGATACGGG
CAGGATCCTATGGCGGCTACCCTCCACGCTGGAACGTGATGAGGGTTCCG
TTCGCCCGTATGCCCATCTGGAGTATCAGGACGGAATGGCGGTCTTTGAC
CGTGAGGGAGATGCGCTTGAAGTCTGGCAGGCTGACCAAGAAGGTGCCAA
ACGTGGAGAGTTCCGGCGCATCGCGATCTTAGACCACAATTGTCAGACCA
GAGGCTTCCAGTTGTCGTATTGGACGCTGTGTGTGGTCTCCACACAGGGG
CAAGGCTTTGTGTATGATATGACGCAGCGACCTCCGAAGCTGACTACGCA
CATCTTTATCGAGAATGATGCTGTCGGCCATTTGGATCAGAGCGCGGACG
CTGTTATCTACTCTATGGGCCCCCGAGGCTATCATGTCTACAACAAGGCG
ACCGGCGAGTTCTTGGGCGCATTGCAGCCATCCCGTTGCACAGACATGTA
TCATATCCTTCCGCCGGTCGCTACCTCGCCGTCTGCGATCGCTGCACTAG
CCGCTGCTGCCCGACATGGTCCGACTCAGCAGATGGTCGCTCTCAGCAAA
CCTCGCAAAGACTGCTTGGTGCCAATTGAGCTTTCTAAGGGTCCGCTTCC
ACCACCGACTGACTTTGAACACGTAAGGCACGGTGACGACGAATGGGGTG
CGGGTATGCTCCACGGTGACCTGTTCGTTGGCTTCTCCCGCGCTGGTCGT
GTATTCGTATGCTCCAACTGGCGGAAGGCCCTACAGAATGAGAGAGGGAT
TTCAGAACATGGGTCCCTTATCGAATGCGAGTCGGACGGTTCTAATTTTG
ACCTGGGCGGCTGGTTGTCTGTGCGCAACCACCGGGTGATGTTTGAGATT
CAGGATCGTATCTATGTTGTGGCCCTCGACGACGAGAATAAGATTCAGGA
CGTTAATAAGCCAGCTCGGGCTTCCTACTCTCTGCTCACTAGCTCGGTGC
CACAGCTTGCTGTGCCGGTCAGTTTTATGGCGTTATATGACGATGCGATC
ATGACCACCTACACTGTGAGTCCTATGTGCTCTTTTGCCGAATTTGGCAT
TAGCAGAAGCAAGCTAATTGATAATTACAGACTCTCGGCTTCCGCCAACA
TAACTCTGACGTTCCAGACGATGAACAAGACGAGGGCCCTGCTCGCATCT
TCCCCACCAAAGCCATCCGCATTGTCAGCCTAGCGCCCGATCTTTCCGAC
GGCAAGTCTGTCCCCATCGATGATCAACAGGCGACAGGCGATGGACTCTG
GAGCTCTGAACCACGTCAAAGGCGGGCTGAGGATACCTGGCGCTCACAGG
CAGGGCTCTTGCAGTTGGTCAGCCTGCTCGGGGATGAGCTCGATGACGAA
GACGAGGCCGAGATGGAGGCCTTAGCCATGGAAAATGAAGAGGAGTGGGA
AGATCTGGATGATGATGACCTTGAAGGTCATGACAATGATCATGATGATG
AGGGTGATGAGGAATCCGAACCAGAGTCTACGCGTGAACATGGGACAGCC
TAGACATAGGACAGTGAGGGCAGATCCTGAATGGCCAGTAACCAATATGA
GCAGGATAGGTCCAAAATGACCAATCACGAATTGACTATCGATCAACCAA
GACAACCAACCGTAAGGGGGTGAGATGAGTCTTGATTTAATTTATTAAGA
GGAAATAGCTGACTATTACCAGATAACGATATATGCCAAGAAGGGGTGGG
ATATCCACATAAGCAAGTGGCAACGGAGATTTGACGAGGCATCATTCCCC
ACGTAGAGATCTACTAACGTGACACTTTAGCTGCGTAGAACTTTGAACCT
TATAATAATATACGCTCGCATTGGATCGCGGGGAAGCATACCGCAGCTGT
CAATCAGATCATGGTACACAGCACCCAAAGCCGGAAGCCTATACATATAG
CCAGACATATCCTTTTGGCGTATCCACTACTACCATTGGGAATATTCAGT
TCATCATTCACTGTGTTGTATAGTGATTAGCAATGATCCGTACTATTGGA
GCTGTACTCTAAACAGCGAATACAAAC back to topCoding sequence (CDS) from alignment at ch7:1096702..1099228- >KJC3_009677-T1 ID=KJC3_009677-T1|Name=KJC3_009677-T1|organism=Aspergillus niger KJC3|type=CDS|length=3786bp|location=Sequence derived from alignment at ch7:1096702..1099228- (Aspergillus niger KJC3)
ACTCTCGGCTTCCGCCAACATAACTCTGACGTTCCAGACGATGAACAAGA
CGAGGGCCCTGCTCGCATCTTCCCCACCAAAGCCATCCGCATTGTCAGCC
TAGCGCCCGATCTTTCCGACGGCAAGTCTGTCCCCATCGATGATCAACAG
GCGACAGGCGATGGACTCTGGAGCTCTGAACCACGTCAAAGGCGGGCTGA
GGATACCTGGCGCTCACAGGCAGGGCTCTTGCAGTTGGTCAGCCTGCTCG
GGGATGAGCTCGATGACGAAGACGAGGCCGAGATGGAGGCCTTAGCCATG
GAAAATGAAGAGGAGTGGGAAGATCTGGATGATGATGACCTTGAAGGTCA
TGACAATGATCATGATGATGAGGGTGATGAGGAATCCGAACCAGAGTCTA
CGCGTGAACATGGGACAGCCTAGATGTCTGCCCCCTCATACATGGCAGAC
CCTCTTACAGTTTTACCACCCGAGATCGTCTTGCGCGTCGTGGAATTCCT
CCCGGTCTCCGCCGTAGCGTCGCTGACCGCCGTCTCCAAGCCCTGGCACC
AATTCATCGACATCACCCATCGAGAAGCTATCTACAGTTCCGAATCGAAA
ACCACCCAACCTCCGGGTGGCGCCCGCGACTTTTCATTTTTGTCGAACAG
CACCACCTCCTTTACCAAATTATTTGAGAACACTACATCATGGAAAGATC
TATGCAAGCGCCAGAAGCTGCTCGCCCGCAATTGGGCCGGCGAGCGCCCA
GTGACCCGCGAGTCGGTGCTTCAAGTCGGCAACAATCCTGTCTGGCGATT
CCGGGCAGACTTTAAGCGCCGGTTCTTCATTTCAACATCACACGCGGGTG
GTCTGAATGTTACGGATATGGATACGGGCAGGATCCTATGGCGGCTACCC
TCCACGCTGGAACGTGATGAGGGTTCCGTTCGCCCGTATGCCCATCTGGA
GTATCAGGACGGAATGGCGGTCTTTGACCGTGAGGGAGATGCGCTTGAAG
TCTGGCAGGCTGACCAAGAAGGTGCCAAACGTGGAGAGTTCCGGCGCATC
GCGATCTTAGACCACAATTGTCAGACCAGAGGCTTCCAGTTGTCGTATTG
GACGCTGTGTGTGGTCTCCACACAGGGGCAAGGCTTTGTGTATGATATGA
CGCAGCGACCTCCGAAGCTGACTACGCACATCTTTATCGAGAATGATGCT
GTCGGCCATTTGGATCAGAGCGCGGACGCTGTTATCTACTCTATGGGCCC
CCGAGGCTATCATGTCTACAACAAGGCGACCGGCGAGTTCTTGGGCGCAT
TGCAGCCATCCCGTTGCACAGACATGTATCATATCCTTCCGCCGGTCGCT
ACCTCGCCGTCTGCGATCGCTGCACTAGCCGCTGCTGCCCGACATGGTCC
GACTCAGCAGATGGTCGCTCTCAGCAAACCTCGCAAAGACTGCTTGGTGC
CAATTGAGCTTTCTAAGGGTCCGCTTCCACCACCGACTGACTTTGAACAC
GTAAGGCACGGTGACGACGAATGGGGTGCGGGTATGCTCCACGGTGACCT
GTTCGTTGGCTTCTCCCGCGCTGGTCGTGTATTCGTATGCTCCAACTGGC
GGAAGGCCCTACAGAATGAGAGAGGGATTTCAGAACATGGGTCCCTTATC
GAATGCGAGTCGGACGGTTCTAATTTTGACCTGGGCGGCTGGTTGTCTGT
GCGCAACCACCGGGTGATGTTTGAGATTCAGGATCGTATCTATGTTGTGG
CCCTCGACGACGAGAATAAGATTCAGGACGTTAATAAGCCAGCTCGGGCT
TCCTACTCTCTGCTCACTAGCTCGGTGCCACAGCTTGCTGTGCCGGTCAG
TTTTATGGCGTTATATGACGATGCGATCATGACCACCTACACTACTCTCG
GCTTCCGCCAACATAACTCTGACGTTCCAGACGATGAACAAGACGAGGGC
CCTGCTCGCATCTTCCCCACCAAAGCCATCCGCATTGTCAGCCTAGCGCC
CGATCTTTCCGACGGCAAGTCTGTCCCCATCGATGATCAACAGGCGACAG
GCGATGGACTCTGGAGCTCTGAACCACGTCAAAGGCGGGCTGAGGATACC
TGGCGCTCACAGGCAGGGCTCTTGCAGTTGGTCAGCCTGCTCGGGGATGA
GCTCGATGACGAAGACGAGGCCGAGATGGAGGCCTTAGCCATGGAAAATG
AAGAGGAGTGGGAAGATCTGGATGATGATGACCTTGAAGGTCATGACAAT
GATCATGATGATGAGGGTGATGAGGAATCCGAACCAGAGTCTACGCGTGA
ACATGGGACAGCCTAGATGTCTGCCCCCTCATACATGGCAGACCCTCTTA
CAGTTTTACCACCCGAGATCGTCTTGCGCGTCGTGGAATTCCTCCCGGTC
TCCGCCGTAGCGTCGCTGACCGCCGTCTCCAAGCCCTGGCACCAATTCAT
CGACATCACCCATCGAGAAGCTATCTACAGTTCCGAATCGAAAACCACCC
AACCTCCGGGTGGCGCCCGCGACTTTTCATTTTTGTCGAACAGCACCACC
TCCTTTACCAAATTATTTGAGAACACTACATCATGGAAAGATCTATGCAA
GCGCCAGAAGCTGCTCGCCCGCAATTGGGCCGGCGAGCGCCCAGTGACCC
GCGAGTCGGTGCTTCAAGTCGGCAACAATCCTGTCTGGCGATTCCGGGCA
GACTTTAAGCGCCGGTTCTTCATTTCAACATCACACGCGGGTGGTCTGAA
TGTTACGGATATGGATACGGGCAGGATCCTATGGCGGCTACCCTCCACGC
TGGAACGTGATGAGGGTTCCGTTCGCCCGTATGCCCATCTGGAGTATCAG
GACGGAATGGCGGTCTTTGACCGTGAGGGAGATGCGCTTGAAGTCTGGCA
GGCTGACCAAGAAGGTGCCAAACGTGGAGAGTTCCGGCGCATCGCGATCT
TAGACCACAATTGTCAGACCAGAGGCTTCCAGTTGTCGTATTGGACGCTG
TGTGTGGTCTCCACACAGGGGCAAGGCTTTGTGTATGATATGACGCAGCG
ACCTCCGAAGCTGACTACGCACATCTTTATCGAGAATGATGCTGTCGGCC
ATTTGGATCAGAGCGCGGACGCTGTTATCTACTCTATGGGCCCCCGAGGC
TATCATGTCTACAACAAGGCGACCGGCGAGTTCTTGGGCGCATTGCAGCC
ATCCCGTTGCACAGACATGTATCATATCCTTCCGCCGGTCGCTACCTCGC
CGTCTGCGATCGCTGCACTAGCCGCTGCTGCCCGACATGGTCCGACTCAG
CAGATGGTCGCTCTCAGCAAACCTCGCAAAGACTGCTTGGTGCCAATTGA
GCTTTCTAAGGGTCCGCTTCCACCACCGACTGACTTTGAACACGTAAGGC
ACGGTGACGACGAATGGGGTGCGGGTATGCTCCACGGTGACCTGTTCGTT
GGCTTCTCCCGCGCTGGTCGTGTATTCGTATGCTCCAACTGGCGGAAGGC
CCTACAGAATGAGAGAGGGATTTCAGAACATGGGTCCCTTATCGAATGCG
AGTCGGACGGTTCTAATTTTGACCTGGGCGGCTGGTTGTCTGTGCGCAAC
CACCGGGTGATGTTTGAGATTCAGGATCGTATCTATGTTGTGGCCCTCGA
CGACGAGAATAAGATTCAGGACGTTAATAAGCCAGCTCGGGCTTCCTACT
CTCTGCTCACTAGCTCGGTGCCACAGCTTGCTGTGCCGGTCAGTTTTATG
GCGTTATATGACGATGCGATCATGACCACCTACACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009677-T1.utr3p1 | KJC3_009677-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009677-T1.utr5p1 | KJC3_009677-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1096702..1099228 - |
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