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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1121422..1124073- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009683-T1 ID=KJC3_009683-T1|Name=KJC3_009683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2652bp|location=Sequence derived from alignment at ch7:1121422..1124073- (Aspergillus niger KJC3) ATGGAAGACGCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGCCGACGG
AACTCCCCTCCAGATCGATGCCGAGAATCCTGCTGTGAGGGGCATCAACG
AGTGGTCTTGGGGTTCGATGAGTCCGGGGATACCCCCCGCGGCCTTTCGT
CCCTATTTCTTGCCCCAGTTCATGGACCGACCGGGTCCCTACCCCTATCA
ATCCTCATCGTCGTCATCCCGTGAGCTCTCAGGCTCAGCTGCCAAAGTCG
CCATTCCCCGCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGGCGCTCG
GCGAGAGCCTGCGAGCCATGTCGACAGCGGAAAATCAAGTGTGATGGAAG
CAAGCCAGTGTGTCGACAGTGCATTGATCACAATGTCAGCTGCTTCTTCG
TGGATGTAAAGCGTGTCCGCGATCAGAAACAACTTGGGCTCCTAGGCAAG
AAGGTTGAACAATATGAGCGCCTATTACAAGAGCTGGAGAAGGAAGTCGA
TGAGAATGCGGCCAGGCGCATCCGAAAAGTCCTTAGGGTAAGTCTCTGCG
TCTAGCTTTTGGTCTGCGGATCTATAAGCCTCCTTGATCTCGACGTGGAT
CATTCCATTAGGCAATATATACATATATCTAACTGCAATGGCTGATCTGA
AAGGGCACCGATATATCATCTCCTACCGACGATGGCGGCGACTCCGATTC
TTCGATTTCGTCCATCGGTTCGCTGGAGGCACTCGACTTAGTTGAGGAAG
ACTTGAACCGCAGCGAGAAAACGGTGGCTACGGGCTTCTTTGGGAAGAAT
TCGGAAGTCTCTTGGATGCAGAAGCTTGAAGATGAAGCTGAAAGTCGAAA
TCGGAAGAAGGAAGATTCTACCGATATGGAGGACGGGGTGGCTGGCGGGC
ACACAATGGCGCCGCCGCAGAAGCAGGAAACAGCGATGGCGGCAATGAGC
TATTACTTGGATGACATCGGTATTCCATTGATGGACTCTGTTGATCCATA
CGCACTTCCCCCCAAGGATTTGGCCAATCGGTTTTTCACTGCGTTTATGG
ACTCGGTCCATCCGTCATTCAATGTCGTCCGCAAGACGGCCTTTGTGTCC
CAGTATCGACAGTTCTTCAGCCAGCCAGCCCAGCCCCCACAGCGTTGGCT
AGCCATCCTGAACATGATCTTTGCAATTGGATGTCGGTATACCCAAGCCA
CGAGTGGCCGACCAGACAGCGGCGATTACAATGATCTGGTGTACTTGAAC
CGGGCGCGCAAATTGACTCTCAGCGAGAGCGTCATCTTTGAGCATGCGGA
TCTTCAGCAAATCCAGGTCGAATTTCTGGTAGCGCTTTATTTTGTCAGCA
AGTGTCAAATAAACAGGTGAGTCTGGCTCCGGGAGAGCTTGTTCTAATCG
CTTGCTAAACTTATTCTACTGCAGGGCATTCAAGTTCTCCAGTATGGCCT
TCCGATCGGCCGTGTCCCTGGGAATCAACCTACGCTTCGTAGACGATCGT
ACGCAGTATCCTGCCAAAGAGGCTCGCATTCGGCTGTGGTGGTCAATATT
CCTCCTGGAACATCTCCTCACTGCGATCACCGGCCGGGTCTCTTGCGTGG
GCGAAAGCCTGAGCGCCACACCACTGCCGATTCCGTACGAAGAGGAAGCG
TTCGGTAGACCCGACGTCCTTCCTCTTCTCCAAGACTCCTCCCTGCGCAT
GACCCGTCTGAAGCTAACTCTCCTGCAGTCGGATGAGGAATCACGCGCCG
ATGTAAGCTGGCTTCCGTCCTGCGAACCCAGCCCATCGCTATACTTCCAC
TGTATCGTGGATTTAGCCACCATTACCCAGGCGATCATCAACAAAGTCTA
CAGTATCCAAGGCCTCCGAGAGCGGGCCAGTCAGGTAGAGCAGCGGATGC
GAAGATTCAGCTTCAATCTCGACATGTGGCTCAGCAAGGTCCCTGAAGCC
TATCGTTTTACCTCCGGCAGCGGTGACCAGTTGGATCTACCCAGTGACCG
TAACGCTCCCTGGATGCGGGAACGCATCTCCTTAGCCATGAGTTACTACA
GTTCCCGTCTCACGCTTTGCCGTCCGTGCCTCACACATACTGGACTGGCG
CCGGGCGACCCATCCCCCGACCCAGCAGTTCCGCCGTCGGCGCGGCAAGG
CTCGCGTCGCAACTCCAGCAGTCGCATACACTTCAACACTGCCATGGCTT
TGACATGCGTCCGCTCAGCTCGGTCCCTTCTCTGCTGTATCCCGGAAACC
CCGGACATCACATGGTTGACTACCATGACCCCCTGGTGGTGCATTCTTCA
TTACATCATGCAAGCAACAACAGTCATCCTTCTCCACCTATCCAGCTGGC
CCACCAGATCTCCCAACGACCCTATGCACCAAGTCTCCGCCGACATCGAA
GCTACATCCCGAGAGACCAAGAAGGCCCTGCGCTGGCTGCACCACATGGC
CTACAAGTATCCCGCCGCCCGACGTGCCTTCCGCCAATGCAGCAGTATTG
TACGACGGATTGCCCCAAGCCTAGGCATTGATATCAGTGACATCCCCTCC
GGGAAAGACCTACCCACTGAGGACGATGCGTATCATTTGCGAGATATTGA
CAATACCCCGAAATCCCGCGCCGAGAGTATGGAGTTTGAACGGCATCACT
AA back to topCoding sequence (CDS) from alignment at ch7:1121422..1124073- >KJC3_009683-T1 ID=KJC3_009683-T1|Name=KJC3_009683-T1|organism=Aspergillus niger KJC3|type=CDS|length=7434bp|location=Sequence derived from alignment at ch7:1121422..1124073- (Aspergillus niger KJC3) GGCATTCAAGTTCTCCAGTATGGCCTTCCGATCGGCCGTGTCCCTGGGAA TCAACCTACGCTTCGTAGACGATCGTACGCAGTATCCTGCCAAAGAGGCT CGCATTCGGCTGTGGTGGTCAATATTCCTCCTGGAACATCTCCTCACTGC GATCACCGGCCGGGTCTCTTGCGTGGGCGAAAGCCTGAGCGCCACACCAC TGCCGATTCCGTACGAAGAGGAAGCGTTCGGTAGACCCGACGTCCTTCCT CTTCTCCAAGACTCCTCCCTGCGCATGACCCGTCTGAAGCTAACTCTCCT GCAGTCGGATGAGGAATCACGCGCCGATGTAAGCTGGCTTCCGTCCTGCG AACCCAGCCCATCGCTATACTTCCACTGTATCGTGGATTTAGCCACCATT ACCCAGGCGATCATCAACAAAGTCTACAGTATCCAAGGCCTCCGAGAGCG GGCCAGTCAGGTAGAGCAGCGGATGCGAAGATTCAGCTTCAATCTCGACA TGTGGCTCAGCAAGGTCCCTGAAGCCTATCGTTTTACCTCCGGCAGCGGT GACCAGTTGGATCTACCCAGTGACCGTAACGCTCCCTGGATGCGGGAACG CATCTCCTTAGCCATGAGTTACTACAGTTCCCGTCTCACGCTTTGCCGTC CGTGCCTCACACATACTGGACTGGCGCCGGGCGACCCATCCCCCGACCCA GCAGTTCCGCCGTCGGCGCGGCAAGGCTCGCGTCGCAACTCCAGCAGTCG CATACACTTCAACACTGCCATGGCTTTGACATGCGTCCGCTCAGCTCGGT CCCTTCTCTGCTGTATCCCGGAAACCCCGGACATCACATGGTTGACTACC ATGACCCCCTGGTGGTGCATTCTTCATTACATCATGCAAGCAACAACAGT CATCCTTCTCCACCTATCCAGCTGGCCCACCAGATCTCCCAACGACCCTA TGCACCAAGTCTCCGCCGACATCGAAGCTACATCCCGAGAGACCAAGAAG GCCCTGCGCTGGCTGCACCACATGGCCTACAAGTATCCCGCCGCCCGACG TGCCTTCCGCCAATGCAGCAGTATTGTACGACGGATTGCCCCAAGCCTAG GCATTGATATCAGTGACATCCCCTCCGGGAAAGACCTACCCACTGAGGAC GATGCGTATCATTTGCGAGATATTGACAATACCCCGAAATCCCGCGCCGA GAGTATGGAGTTTGAACGGCATCACTAAGGCACCGATATATCATCTCCTA CCGACGATGGCGGCGACTCCGATTCTTCGATTTCGTCCATCGGTTCGCTG GAGGCACTCGACTTAGTTGAGGAAGACTTGAACCGCAGCGAGAAAACGGT GGCTACGGGCTTCTTTGGGAAGAATTCGGAAGTCTCTTGGATGCAGAAGC TTGAAGATGAAGCTGAAAGTCGAAATCGGAAGAAGGAAGATTCTACCGAT ATGGAGGACGGGGTGGCTGGCGGGCACACAATGGCGCCGCCGCAGAAGCA GGAAACAGCGATGGCGGCAATGAGCTATTACTTGGATGACATCGGTATTC CATTGATGGACTCTGTTGATCCATACGCACTTCCCCCCAAGGATTTGGCC AATCGGTTTTTCACTGCGTTTATGGACTCGGTCCATCCGTCATTCAATGT CGTCCGCAAGACGGCCTTTGTGTCCCAGTATCGACAGTTCTTCAGCCAGC CAGCCCAGCCCCCACAGCGTTGGCTAGCCATCCTGAACATGATCTTTGCA ATTGGATGTCGGTATACCCAAGCCACGAGTGGCCGACCAGACAGCGGCGA TTACAATGATCTGGTGTACTTGAACCGGGCGCGCAAATTGACTCTCAGCG AGAGCGTCATCTTTGAGCATGCGGATCTTCAGCAAATCCAGGTCGAATTT CTGGTAGCGCTTTATTTTGTCAGCAAGTGTCAAATAAACAGATGGAAGAC GCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGCCGACGGAACTCCCCT CCAGATCGATGCCGAGAATCCTGCTGTGAGGGGCATCAACGAGTGGTCTT GGGGTTCGATGAGTCCGGGGATACCCCCCGCGGCCTTTCGTCCCTATTTC TTGCCCCAGTTCATGGACCGACCGGGTCCCTACCCCTATCAATCCTCATC GTCGTCATCCCGTGAGCTCTCAGGCTCAGCTGCCAAAGTCGCCATTCCCC GCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGGCGCTCGGCGAGAGCC TGCGAGCCATGTCGACAGCGGAAAATCAAGTGTGATGGAAGCAAGCCAGT GTGTCGACAGTGCATTGATCACAATGTCAGCTGCTTCTTCGTGGATGTAA AGCGTGTCCGCGATCAGAAACAACTTGGGCTCCTAGGCAAGAAGGTTGAA CAATATGAGCGCCTATTACAAGAGCTGGAGAAGGAAGTCGATGAGAATGC GGCCAGGCGCATCCGAAAAGTCCTTAGGGGCATTCAAGTTCTCCAGTATG GCCTTCCGATCGGCCGTGTCCCTGGGAATCAACCTACGCTTCGTAGACGA TCGTACGCAGTATCCTGCCAAAGAGGCTCGCATTCGGCTGTGGTGGTCAA TATTCCTCCTGGAACATCTCCTCACTGCGATCACCGGCCGGGTCTCTTGC GTGGGCGAAAGCCTGAGCGCCACACCACTGCCGATTCCGTACGAAGAGGA AGCGTTCGGTAGACCCGACGTCCTTCCTCTTCTCCAAGACTCCTCCCTGC GCATGACCCGTCTGAAGCTAACTCTCCTGCAGTCGGATGAGGAATCACGC GCCGATGTAAGCTGGCTTCCGTCCTGCGAACCCAGCCCATCGCTATACTT CCACTGTATCGTGGATTTAGCCACCATTACCCAGGCGATCATCAACAAAG TCTACAGTATCCAAGGCCTCCGAGAGCGGGCCAGTCAGGTAGAGCAGCGG ATGCGAAGATTCAGCTTCAATCTCGACATGTGGCTCAGCAAGGTCCCTGA AGCCTATCGTTTTACCTCCGGCAGCGGTGACCAGTTGGATCTACCCAGTG ACCGTAACGCTCCCTGGATGCGGGAACGCATCTCCTTAGCCATGAGTTAC TACAGTTCCCGTCTCACGCTTTGCCGTCCGTGCCTCACACATACTGGACT GGCGCCGGGCGACCCATCCCCCGACCCAGCAGTTCCGCCGTCGGCGCGGC AAGGCTCGCGTCGCAACTCCAGCAGTCGCATACACTTCAACACTGCCATG GCTTTGACATGCGTCCGCTCAGCTCGGTCCCTTCTCTGCTGTATCCCGGA AACCCCGGACATCACATGGTTGACTACCATGACCCCCTGGTGGTGCATTC TTCATTACATCATGCAAGCAACAACAGTCATCCTTCTCCACCTATCCAGC TGGCCCACCAGATCTCCCAACGACCCTATGCACCAAGTCTCCGCCGACAT CGAAGCTACATCCCGAGAGACCAAGAAGGCCCTGCGCTGGCTGCACCACA TGGCCTACAAGTATCCCGCCGCCCGACGTGCCTTCCGCCAATGCAGCAGT ATTGTACGACGGATTGCCCCAAGCCTAGGCATTGATATCAGTGACATCCC CTCCGGGAAAGACCTACCCACTGAGGACGATGCGTATCATTTGCGAGATA TTGACAATACCCCGAAATCCCGCGCCGAGAGTATGGAGTTTGAACGGCAT CACTAAGGCACCGATATATCATCTCCTACCGACGATGGCGGCGACTCCGA TTCTTCGATTTCGTCCATCGGTTCGCTGGAGGCACTCGACTTAGTTGAGG AAGACTTGAACCGCAGCGAGAAAACGGTGGCTACGGGCTTCTTTGGGAAG AATTCGGAAGTCTCTTGGATGCAGAAGCTTGAAGATGAAGCTGAAAGTCG AAATCGGAAGAAGGAAGATTCTACCGATATGGAGGACGGGGTGGCTGGCG GGCACACAATGGCGCCGCCGCAGAAGCAGGAAACAGCGATGGCGGCAATG AGCTATTACTTGGATGACATCGGTATTCCATTGATGGACTCTGTTGATCC ATACGCACTTCCCCCCAAGGATTTGGCCAATCGGTTTTTCACTGCGTTTA TGGACTCGGTCCATCCGTCATTCAATGTCGTCCGCAAGACGGCCTTTGTG TCCCAGTATCGACAGTTCTTCAGCCAGCCAGCCCAGCCCCCACAGCGTTG GCTAGCCATCCTGAACATGATCTTTGCAATTGGATGTCGGTATACCCAAG CCACGAGTGGCCGACCAGACAGCGGCGATTACAATGATCTGGTGTACTTG AACCGGGCGCGCAAATTGACTCTCAGCGAGAGCGTCATCTTTGAGCATGC GGATCTTCAGCAAATCCAGGTCGAATTTCTGGTAGCGCTTTATTTTGTCA GCAAGTGTCAAATAAACAGATGGAAGACGCGTCTGGATCCTATCCCTTTG GCGTCGCAACTGCCGACGGAACTCCCCTCCAGATCGATGCCGAGAATCCT GCTGTGAGGGGCATCAACGAGTGGTCTTGGGGTTCGATGAGTCCGGGGAT ACCCCCCGCGGCCTTTCGTCCCTATTTCTTGCCCCAGTTCATGGACCGAC CGGGTCCCTACCCCTATCAATCCTCATCGTCGTCATCCCGTGAGCTCTCA GGCTCAGCTGCCAAAGTCGCCATTCCCCGCACGACCAGCGCCAGTAGCCA GTCGCAACGCCGGCGCTCGGCGAGAGCCTGCGAGCCATGTCGACAGCGGA AAATCAAGTGTGATGGAAGCAAGCCAGTGTGTCGACAGTGCATTGATCAC AATGTCAGCTGCTTCTTCGTGGATGTAAAGCGTGTCCGCGATCAGAAACA ACTTGGGCTCCTAGGCAAGAAGGTTGAACAATATGAGCGCCTATTACAAG AGCTGGAGAAGGAAGTCGATGAGAATGCGGCCAGGCGCATCCGAAAAGTC CTTAGGGGCATTCAAGTTCTCCAGTATGGCCTTCCGATCGGCCGTGTCCC TGGGAATCAACCTACGCTTCGTAGACGATCGTACGCAGTATCCTGCCAAA GAGGCTCGCATTCGGCTGTGGTGGTCAATATTCCTCCTGGAACATCTCCT CACTGCGATCACCGGCCGGGTCTCTTGCGTGGGCGAAAGCCTGAGCGCCA CACCACTGCCGATTCCGTACGAAGAGGAAGCGTTCGGTAGACCCGACGTC CTTCCTCTTCTCCAAGACTCCTCCCTGCGCATGACCCGTCTGAAGCTAAC TCTCCTGCAGTCGGATGAGGAATCACGCGCCGATGTAAGCTGGCTTCCGT CCTGCGAACCCAGCCCATCGCTATACTTCCACTGTATCGTGGATTTAGCC ACCATTACCCAGGCGATCATCAACAAAGTCTACAGTATCCAAGGCCTCCG AGAGCGGGCCAGTCAGGTAGAGCAGCGGATGCGAAGATTCAGCTTCAATC TCGACATGTGGCTCAGCAAGGTCCCTGAAGCCTATCGTTTTACCTCCGGC AGCGGTGACCAGTTGGATCTACCCAGTGACCGTAACGCTCCCTGGATGCG GGAACGCATCTCCTTAGCCATGAGTTACTACAGTTCCCGTCTCACGCTTT GCCGTCCGTGCCTCACACATACTGGACTGGCGCCGGGCGACCCATCCCCC GACCCAGCAGTTCCGCCGTCGGCGCGGCAAGGCTCGCGTCGCAACTCCAG CAGTCGCATACACTTCAACACTGCCATGGCTTTGACATGCGTCCGCTCAG CTCGGTCCCTTCTCTGCTGTATCCCGGAAACCCCGGACATCACATGGTTG ACTACCATGACCCCCTGGTGGTGCATTCTTCATTACATCATGCAAGCAAC AACAGTCATCCTTCTCCACCTATCCAGCTGGCCCACCAGATCTCCCAACG ACCCTATGCACCAAGTCTCCGCCGACATCGAAGCTACATCCCGAGAGACC AAGAAGGCCCTGCGCTGGCTGCACCACATGGCCTACAAGTATCCCGCCGC CCGACGTGCCTTCCGCCAATGCAGCAGTATTGTACGACGGATTGCCCCAA GCCTAGGCATTGATATCAGTGACATCCCCTCCGGGAAAGACCTACCCACT GAGGACGATGCGTATCATTTGCGAGATATTGACAATACCCCGAAATCCCG CGCCGAGAGTATGGAGTTTGAACGGCATCACTAAGGCACCGATATATCAT CTCCTACCGACGATGGCGGCGACTCCGATTCTTCGATTTCGTCCATCGGT TCGCTGGAGGCACTCGACTTAGTTGAGGAAGACTTGAACCGCAGCGAGAA AACGGTGGCTACGGGCTTCTTTGGGAAGAATTCGGAAGTCTCTTGGATGC AGAAGCTTGAAGATGAAGCTGAAAGTCGAAATCGGAAGAAGGAAGATTCT ACCGATATGGAGGACGGGGTGGCTGGCGGGCACACAATGGCGCCGCCGCA GAAGCAGGAAACAGCGATGGCGGCAATGAGCTATTACTTGGATGACATCG GTATTCCATTGATGGACTCTGTTGATCCATACGCACTTCCCCCCAAGGAT TTGGCCAATCGGTTTTTCACTGCGTTTATGGACTCGGTCCATCCGTCATT CAATGTCGTCCGCAAGACGGCCTTTGTGTCCCAGTATCGACAGTTCTTCA GCCAGCCAGCCCAGCCCCCACAGCGTTGGCTAGCCATCCTGAACATGATC TTTGCAATTGGATGTCGGTATACCCAAGCCACGAGTGGCCGACCAGACAG CGGCGATTACAATGATCTGGTGTACTTGAACCGGGCGCGCAAATTGACTC TCAGCGAGAGCGTCATCTTTGAGCATGCGGATCTTCAGCAAATCCAGGTC GAATTTCTGGTAGCGCTTTATTTTGTCAGCAAGTGTCAAATAAACAGATG GAAGACGCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGCCGACGGAAC TCCCCTCCAGATCGATGCCGAGAATCCTGCTGTGAGGGGCATCAACGAGT GGTCTTGGGGTTCGATGAGTCCGGGGATACCCCCCGCGGCCTTTCGTCCC TATTTCTTGCCCCAGTTCATGGACCGACCGGGTCCCTACCCCTATCAATC CTCATCGTCGTCATCCCGTGAGCTCTCAGGCTCAGCTGCCAAAGTCGCCA TTCCCCGCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGGCGCTCGGCG AGAGCCTGCGAGCCATGTCGACAGCGGAAAATCAAGTGTGATGGAAGCAA GCCAGTGTGTCGACAGTGCATTGATCACAATGTCAGCTGCTTCTTCGTGG ATGTAAAGCGTGTCCGCGATCAGAAACAACTTGGGCTCCTAGGCAAGAAG GTTGAACAATATGAGCGCCTATTACAAGAGCTGGAGAAGGAAGTCGATGA GAATGCGGCCAGGCGCATCCGAAAAGTCCTTAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006351 | transcription, DNA-templated |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR007219 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF04082 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:1121422..1124073 - |
|