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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1145561..1147292+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009689-T1 ID=KJC3_009689-T1|Name=KJC3_009689-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1732bp|location=Sequence derived from alignment at ch7:1145561..1147292+ (Aspergillus niger KJC3)
CTTTGCGCCTGCTTTCCCTGCCAACTCCCCGGGCATCGCTTTGTCCCGGC
TTCTGCAGCGACCGTCCGACCTGGGATGCATTCTTGATCATGCCCCTTCA
CGAGCCCGTCCGGTGATAGTTTCCTTTTAACGACTCCTCTACAATCGTCG
TGGTGAAAATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAACGAACTG
GCCTCTCGACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGATCATCT
GTTCTATCAGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAAATGATC
TCGCCCTTCTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAGCTCTTT
CGGCTCCTCCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTATTTCGCG
CGATGATGCTGAAAAGTAGGATTATTCTTCTACCTATGAAATCAACATAG
GAACTCTCACCCACTAACCCACCCTGTTTAGACTTCGAGACCTAAGCCCC
GACGAGAGTTTGGTCTACAATGTCATCCATTCAACAGGACGGTCCGGTAT
TTGGGTCCGCGCTATCGGCAACCGCACCAACCTTCACAAGTCCATACTCG
ATCGCTGCCTCAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGTCCAC
AATGTCAAATTCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCGCCCC
AAGTGAAGACGTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTGGACG
AGAACTTCATCAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAGCCGG
AAGAGCTGGTACGAGGCCCCCTCCTCCTCGGACGGTCCTCGAAACAAGCG
CATGAAGACCGCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCTCCGA
AGGAATACCTCCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCATACCT
ATGCTGACAGCCGCCGTGAACGAGAGTGGCATCACACCGGTCCGTCTGGG
CGAAGAGAGCATCACGCAGCTCCTGGAGATGCTCTGCTACGACAACAAGC
TAGTATCATTGAACAACGGCGAGTTCTACAAATCCGTCAAGAACCCCGAA
CAAGTCAAGTCTCAACAAGCGCGCAAGCCCCGGACCGACGACGCAGGCAT
CGACGACAGGCTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGCAACT
GTCCGGTTTTCAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGAGAGT
TGCGAATACTTTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGATTCTC
TCTTATTATCTACCTCACATCATTTCTACCTCACATACTCGTTACACCTT
ATATCACACAATTCCTGTATACAATTAGCGCAGCATGCGCCAGATGATGT
TTGTTTGCATAGCGATGGCGTTCACGTCTGATATTGGGATCGGCCATGGA
ACACGGTCTTCTTTTCTCAATGTGGGCAACTAAAAACAAAAGAATTTTCA
AGGGCTTTCATGTTTTCTGGGAAAGAAAAAGGATGGAAAAGCGAAGGGCA
GCGGTGGGAAGGGATTGGATGGATGGCGGTTTGACAATTGCCTGGTGCTA
CTTACTAGCTATCTACTACTACTAACTAGTATTTTGGCTTCTTGTTGGAC
TGTTTTCTCCTGGTGTAGTATATAGTATCGGTTGTTCGGATGGGCTGCTG
TGGCACATCACAATGAAAGAAAGAAGTATTAC back to topCoding sequence (CDS) from alignment at ch7:1145561..1147292+ >KJC3_009689-T1 ID=KJC3_009689-T1|Name=KJC3_009689-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch7:1145561..1147292+ (Aspergillus niger KJC3)
ATGGCCTCCGCGGGGGCGTCAGGCAGTTCGGTCAACGAACTGGCCTCTCG
ACTTTACGACGCCTGTCTTAACCAGTTCCCTTCCGATCATCTGTTCTATC
AGCAAGATCTCCTGGGTCTGAACATTGTCCCCAAAAATGATCTCGCCCTT
CTCTTGAACTGCACCCAGTCGCTCGTCGACCAGAAGCTCTTTCGGCTCCT
CCAGGGCAAAAATGACCGCTTAGCCTGGAAGATTATTTCGCGCGATGATG
CTGAAAAACTTCGAGACCTAAGCCCCGACGAGAGTTTGGTCTACAATGTC
ATCCATTCAACAGGACGGTCCGGTATTTGGGTCCGCGCTATCGGCAACCG
CACCAACCTTCACAAGTCCATACTCGATCGCTGCCTCAAGTCGCTGGAAT
CGAGAAGCTACATCAAGAGCGTCCACAATGTCAAATTCCCCAGCCGGAAG
ATGTACATGCTGGCGAACCTCGCCCCAAGTGAAGACGTGACTGGTGGAGC
CTGGTTTACCGACGGAGTTTTGGACGAGAACTTCATCAACAGCGTCGCCG
GCTTTATCGAATACTCCGTGAGCCGGAAGAGCTGGTACGAGGCCCCCTCC
TCCTCGGACGGTCCTCGAAACAAGCGCATGAAGACCGCGGATGGAAGCCT
AGCTGTCAAACAAGAGGGCGCTCCGAAGGAATACCTCCCCTTCCCAGCCG
GGTATCAGGGCTACCCCACCATACCTATGCTGACAGCCGCCGTGAACGAG
AGTGGCATCACACCGGTCCGTCTGGGCGAAGAGAGCATCACGCAGCTCCT
GGAGATGCTCTGCTACGACAACAAGCTAGTATCATTGAACAACGGCGAGT
TCTACAAATCCGTCAAGAACCCCGAACAAGTCAAGTCTCAACAAGCGCGC
AAGCCCCGGACCGACGACGCAGGCATCGACGACAGGCTAGTCAAGAACGG
CATGACCGAAGCGCCCTGCGGCAACTGTCCGGTTTTCAAGCTCTGCGCTC
CCGGCGGGGCTGTCAGTCCCGAGAGTTGCGAATACTTTGACCCCTGGCTA
GAAAAGGCCCTCGGATTCTGAATGGCCTCCGCGGGGGCGTCAGGCAGTTC
GGTCAACGAACTGGCCTCTCGACTTTACGACGCCTGTCTTAACCAGTTCC
CTTCCGATCATCTGTTCTATCAGCAAGATCTCCTGGGTCTGAACATTGTC
CCCAAAAATGATCTCGCCCTTCTCTTGAACTGCACCCAGTCGCTCGTCGA
CCAGAAGCTCTTTCGGCTCCTCCAGGGCAAAAATGACCGCTTAGCCTGGA
AGATTATTTCGCGCGATGATGCTGAAAAACTTCGAGACCTAAGCCCCGAC
GAGAGTTTGGTCTACAATGTCATCCATTCAACAGGACGGTCCGGTATTTG
GGTCCGCGCTATCGGCAACCGCACCAACCTTCACAAGTCCATACTCGATC
GCTGCCTCAAGTCGCTGGAATCGAGAAGCTACATCAAGAGCGTCCACAAT
GTCAAATTCCCCAGCCGGAAGATGTACATGCTGGCGAACCTCGCCCCAAG
TGAAGACGTGACTGGTGGAGCCTGGTTTACCGACGGAGTTTTGGACGAGA
ACTTCATCAACAGCGTCGCCGGCTTTATCGAATACTCCGTGAGCCGGAAG
AGCTGGTACGAGGCCCCCTCCTCCTCGGACGGTCCTCGAAACAAGCGCAT
GAAGACCGCGGATGGAAGCCTAGCTGTCAAACAAGAGGGCGCTCCGAAGG
AATACCTCCCCTTCCCAGCCGGGTATCAGGGCTACCCCACCATACCTATG
CTGACAGCCGCCGTGAACGAGAGTGGCATCACACCGGTCCGTCTGGGCGA
AGAGAGCATCACGCAGCTCCTGGAGATGCTCTGCTACGACAACAAGCTAG
TATCATTGAACAACGGCGAGTTCTACAAATCCGTCAAGAACCCCGAACAA
GTCAAGTCTCAACAAGCGCGCAAGCCCCGGACCGACGACGCAGGCATCGA
CGACAGGCTAGTCAAGAACGGCATGACCGAAGCGCCCTGCGGCAACTGTC
CGGTTTTCAAGCTCTGCGCTCCCGGCGGGGCTGTCAGTCCCGAGAGTTGC
GAATACTTTGACCCCTGGCTAGAAAAGGCCCTCGGATTCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005666 | RNA polymerase III complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006383 | transcription by RNA polymerase III |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009689-T1.utr5p1 | KJC3_009689-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009689-T1.utr3p1 | KJC3_009689-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092646WF |
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR007832 |
| DBxref | InterPro:IPR036388 |
| DBxref | PFAM:PF05158 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1145561..1147292 + |
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