|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1151830..1154803- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009691-T1 ID=KJC3_009691-T1|Name=KJC3_009691-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2974bp|location=Sequence derived from alignment at ch7:1151830..1154803- (Aspergillus niger KJC3)
TCGAGAACCAACAACCCCAGCGTATCAGCGAATAAACTCTCCCTTATACA
AGCGCTTATTTAAGCGGCTGCATTTCTCATATCAAATTGGCGGGGAAGCC
CGCAAAAGCCCCCACATCCGGCCGGGTCCCGAACACCGCCTTCTCTAGTG
TCGGGGGGGAGATAGTCCATGGTTGTCTATTACCAACCAACCCCAGACGG
CAGGACGCGGCAACGATAGGCAACTGCTAAATTCCGACCCTCTTATGCTG
AATGTGATCTTCTGCGCAGCTGCAAATGCCGTTGGCTTTGCTTATTCTCT
AGTATGTTGACCGCCAAACGCAAGCCGTCAAGTGCGGACTTGGGCGACGA
TAGACCAGTGGCGAAGAGAAGTAACAGCCTGAGCCATAATGCTCATGCAC
CTTGGTTGCAAGAGTCCAGACCTTCTCGGAGCTGGCGGACTCTGGGAGAT
CGTGGGGTACGGACTTCGCTGCCACTAGAAAACATGGTCTCGACTGTGCG
GGATCTCATTGACCCTGACTTTGACCCTCTTATTGCTCTCCTCGACGATG
AGCCGCGCTTTCTGAAGCCTCTCCCGTCTCGCATCCCACCGGAAGACCTA
GAGTTTCTGCGATTCCGCGGGGCTTTGTCGATCCCAGAGAGTGGTCTGCG
GAATGAGCTACTGCGATGCTATATCAAATGGGTGCATAGCTTTATGCCGG
TGTTGAACCTACAGGAATTCCTCCGATGCGTTGCGGAAAATGACCCCAAT
GGTAACATTAGTCTCCTGCTGTTTCAAGCAGTGATGTTCGTGGCGACAGC
CTTCATCGATCTGCATCATTTACAGGCCGCTGGGTATGCCACTCGGAAAA
TTGCCCGTAATGTGTTTTTTACGCGGTTAAGGGTATGTCTCGCTTGATAA
TTCATCCGTGTACTTAGCTAACCAGTCAATATAGCTCCTCTACTCACTTG
ATTGCGAAGATGATCGGATAGTTATACTGCAGACTCTACTACTTATGACT
TATTGGTCTGATCATCAAAATAATCCGCAAAGAGATATCTGGGACTGGAT
TGGTGTCTGCAATATACATGCACATTCAATCGGGTTAAATAGAGACCCTT
CGTCGTCGACCAACATGGATCCAAGGACTAAGAGGCTGAGGACCCGAATT
TGGTGGAGCTTATACTCGCGAGACCGTCTTATTGCGATGGGGCTAAGACG
CCCGACGCAGGTAAACGAAGGGACAAGCAATGTCCCCATGTTGAAGCTGG
AAGACTTTGACTTCGAGTCGTTCCACCCTAGCGTGATTGAGATGTTTCGT
TGTCGCCAGCTGGAGGATGTTACTCACCAAAAACGCCTGGCGACTATGTT
CATCGAAAAGGCCAAATTATGCCAGTGCATTGGACGGGTTTTGTTCGCCC
AGTATACGCCATCACAATGTCAGTTCGGTGTGACGACACGAACTACCATT
AGCCTAGTCCCTCGGCAGGCATCGGAATCCGAATTGGCGCGGTGCAGCCA
GCGGTTAGAGTCCTGGCTGAGTGCACTACCCAAAGACGCCCAATTTATTC
CTGCGTCAAGAACAAACTTCCATGACGGAGAAGACGTCCTTCTGCTCCAC
GGTGCCATGGTACGAATGCTGTATCATGCTACCACAAGCGCACTGCATCG
TCCCTGGGCCTTCACGCCCAACAAGGATCAGTCAAAATCACGCAGGGAGT
TGATTCAAGCTGCACAAACGAAGATGCATGACGCCGCCGTTGGTATCACC
CATATAATCCAAGGTCTCAATCAGCTCAACCTCACGCGATTTCTCCCACA
ATCCGGTGTAACCGTTATCATCCCAGCCGCTGTGGCCCATCTGACAAACT
CCTCATCTGGCAATCCCGCCACCCGAGAATCCAGCATCTACAACTTTCAA
CGCTGCATACAAGTGCTGCAGGGCCTTAGAGACATCTACCCTGCAGCAGA
CATGGAGGTCGCGAACATCGAAGCGGCAGTTAAGCTACAGTCCGATAGCG
CAAACACCTTCCTCCGAATCATGCAATACACCAACAACTCCGGTTCTATG
TCGCAGGGCCAATCACAAGAACACGCACGTAAACAAAGCACCATCTCAAA
CCCACACACCATAGCATCAGCAGAAGACCGAACCTCCAACCACTGGACCC
CTCCCCAAGACGGACCCGACCCAACCAACAACCACAAGCAATCCGAACCT
CAACATCCAGCCGGTCCAACCAAGCAACAACAACAACGCACACCAACCAA
AAGACACTCCAGCACAATCAACCCACCCCTAATCTTCAACAACACCAGCA
CCACCAACAACACAAACAATCCCTCCAACCCCCTCCCCAAAAAAGCCGAA
CCCACCCCACCCAACGACTTCGACGACGACCCCATCTCCAACTTCCTCAA
CGACAACAACCCCACCATCTCCCCCCGGAACACCCAAACACAACCCAATC
CCACCTTCGACCAAGGCTCCGATCAGTTCCCCTTTGACTTTGATCTCGAC
CTCGACTCCTTCGCCGCCGACTTCCCGCCCCAAAACCCACCATCCACCAA
CCTCAACCCCGCCTCTACTTCCAACCCCGACGCCTCCCCAGATCTCGACA
TAGATTGGGCTAGTGAGCTGCTTAGATGGACCGGACCGGGTCCGGAGGAT
GCATTGACCAATAATAATGATCTGTTCTCGCCGTTTGCTCCGACTCCTAA
TGTTGAGAGTACCCCGGGGCAGAGGTCCATGAGTCATGTGACTGGAGATA
TTACAGGGGATTTAGATAGAGATTTGGGGTTTGTTCCTTCTGATGAGGAG
ATCTTTTAGGTTGGTGTGAGAGGGAGCTGAGGTGGTTGTTCGTGTGTGTG
GTGTGATGTTCTTTAGTTCATGTAAATATATATATATATTGCGGAAGTGG
TGCTTAAAGTACAGACACTGGCAGCACCCTGTAAATAGAGCACTTTTCCC
GAATGCAAGTGGTAGTAATGAGGG back to topCoding sequence (CDS) from alignment at ch7:1151830..1154803- >KJC3_009691-T1 ID=KJC3_009691-T1|Name=KJC3_009691-T1|organism=Aspergillus niger KJC3|type=CDS|length=4908bp|location=Sequence derived from alignment at ch7:1151830..1154803- (Aspergillus niger KJC3)
CTCCTCTACTCACTTGATTGCGAAGATGATCGGATAGTTATACTGCAGAC
TCTACTACTTATGACTTATTGGTCTGATCATCAAAATAATCCGCAAAGAG
ATATCTGGGACTGGATTGGTGTCTGCAATATACATGCACATTCAATCGGG
TTAAATAGAGACCCTTCGTCGTCGACCAACATGGATCCAAGGACTAAGAG
GCTGAGGACCCGAATTTGGTGGAGCTTATACTCGCGAGACCGTCTTATTG
CGATGGGGCTAAGACGCCCGACGCAGGTAAACGAAGGGACAAGCAATGTC
CCCATGTTGAAGCTGGAAGACTTTGACTTCGAGTCGTTCCACCCTAGCGT
GATTGAGATGTTTCGTTGTCGCCAGCTGGAGGATGTTACTCACCAAAAAC
GCCTGGCGACTATGTTCATCGAAAAGGCCAAATTATGCCAGTGCATTGGA
CGGGTTTTGTTCGCCCAGTATACGCCATCACAATGTCAGTTCGGTGTGAC
GACACGAACTACCATTAGCCTAGTCCCTCGGCAGGCATCGGAATCCGAAT
TGGCGCGGTGCAGCCAGCGGTTAGAGTCCTGGCTGAGTGCACTACCCAAA
GACGCCCAATTTATTCCTGCGTCAAGAACAAACTTCCATGACGGAGAAGA
CGTCCTTCTGCTCCACGGTGCCATGGTACGAATGCTGTATCATGCTACCA
CAAGCGCACTGCATCGTCCCTGGGCCTTCACGCCCAACAAGGATCAGTCA
AAATCACGCAGGGAGTTGATTCAAGCTGCACAAACGAAGATGCATGACGC
CGCCGTTGGTATCACCCATATAATCCAAGGTCTCAATCAGCTCAACCTCA
CGCGATTTCTCCCACAATCCGGTGTAACCGTTATCATCCCAGCCGCTGTG
GCCCATCTGACAAACTCCTCATCTGGCAATCCCGCCACCCGAGAATCCAG
CATCTACAACTTTCAACGCTGCATACAAGTGCTGCAGGGCCTTAGAGACA
TCTACCCTGCAGCAGACATGGAGGTCGCGAACATCGAAGCGGCAGTTAAG
CTACAGTCCGATAGCGCAAACACCTTCCTCCGAATCATGCAATACACCAA
CAACTCCGGTTCTATGTCGCAGGGCCAATCACAAGAACACGCACGTAAAC
AAAGCACCATCTCAAACCCACACACCATAGCATCAGCAGAAGACCGAACC
TCCAACCACTGGACCCCTCCCCAAGACGGACCCGACCCAACCAACAACCA
CAAGCAATCCGAACCTCAACATCCAGCCGGTCCAACCAAGCAACAACAAC
AACGCACACCAACCAAAAGACACTCCAGCACAATCAACCCACCCCTAATC
TTCAACAACACCAGCACCACCAACAACACAAACAATCCCTCCAACCCCCT
CCCCAAAAAAGCCGAACCCACCCCACCCAACGACTTCGACGACGACCCCA
TCTCCAACTTCCTCAACGACAACAACCCCACCATCTCCCCCCGGAACACC
CAAACACAACCCAATCCCACCTTCGACCAAGGCTCCGATCAGTTCCCCTT
TGACTTTGATCTCGACCTCGACTCCTTCGCCGCCGACTTCCCGCCCCAAA
ACCCACCATCCACCAACCTCAACCCCGCCTCTACTTCCAACCCCGACGCC
TCCCCAGATCTCGACATAGATTGGGCTAGTGAGCTGCTTAGATGGACCGG
ACCGGGTCCGGAGGATGCATTGACCAATAATAATGATCTGTTCTCGCCGT
TTGCTCCGACTCCTAATGTTGAGAGTACCCCGGGGCAGAGGTCCATGAGT
CATGTGACTGGAGATATTACAGGGGATTTAGATAGAGATTTGGGGTTTGT
TCCTTCTGATGAGGAGATCTTTTAGATGTTGACCGCCAAACGCAAGCCGT
CAAGTGCGGACTTGGGCGACGATAGACCAGTGGCGAAGAGAAGTAACAGC
CTGAGCCATAATGCTCATGCACCTTGGTTGCAAGAGTCCAGACCTTCTCG
GAGCTGGCGGACTCTGGGAGATCGTGGGGTACGGACTTCGCTGCCACTAG
AAAACATGGTCTCGACTGTGCGGGATCTCATTGACCCTGACTTTGACCCT
CTTATTGCTCTCCTCGACGATGAGCCGCGCTTTCTGAAGCCTCTCCCGTC
TCGCATCCCACCGGAAGACCTAGAGTTTCTGCGATTCCGCGGGGCTTTGT
CGATCCCAGAGAGTGGTCTGCGGAATGAGCTACTGCGATGCTATATCAAA
TGGGTGCATAGCTTTATGCCGGTGTTGAACCTACAGGAATTCCTCCGATG
CGTTGCGGAAAATGACCCCAATGGTAACATTAGTCTCCTGCTGTTTCAAG
CAGTGATGTTCGTGGCGACAGCCTTCATCGATCTGCATCATTTACAGGCC
GCTGGGTATGCCACTCGGAAAATTGCCCGTAATGTGTTTTTTACGCGGTT
AAGGCTCCTCTACTCACTTGATTGCGAAGATGATCGGATAGTTATACTGC
AGACTCTACTACTTATGACTTATTGGTCTGATCATCAAAATAATCCGCAA
AGAGATATCTGGGACTGGATTGGTGTCTGCAATATACATGCACATTCAAT
CGGGTTAAATAGAGACCCTTCGTCGTCGACCAACATGGATCCAAGGACTA
AGAGGCTGAGGACCCGAATTTGGTGGAGCTTATACTCGCGAGACCGTCTT
ATTGCGATGGGGCTAAGACGCCCGACGCAGGTAAACGAAGGGACAAGCAA
TGTCCCCATGTTGAAGCTGGAAGACTTTGACTTCGAGTCGTTCCACCCTA
GCGTGATTGAGATGTTTCGTTGTCGCCAGCTGGAGGATGTTACTCACCAA
AAACGCCTGGCGACTATGTTCATCGAAAAGGCCAAATTATGCCAGTGCAT
TGGACGGGTTTTGTTCGCCCAGTATACGCCATCACAATGTCAGTTCGGTG
TGACGACACGAACTACCATTAGCCTAGTCCCTCGGCAGGCATCGGAATCC
GAATTGGCGCGGTGCAGCCAGCGGTTAGAGTCCTGGCTGAGTGCACTACC
CAAAGACGCCCAATTTATTCCTGCGTCAAGAACAAACTTCCATGACGGAG
AAGACGTCCTTCTGCTCCACGGTGCCATGGTACGAATGCTGTATCATGCT
ACCACAAGCGCACTGCATCGTCCCTGGGCCTTCACGCCCAACAAGGATCA
GTCAAAATCACGCAGGGAGTTGATTCAAGCTGCACAAACGAAGATGCATG
ACGCCGCCGTTGGTATCACCCATATAATCCAAGGTCTCAATCAGCTCAAC
CTCACGCGATTTCTCCCACAATCCGGTGTAACCGTTATCATCCCAGCCGC
TGTGGCCCATCTGACAAACTCCTCATCTGGCAATCCCGCCACCCGAGAAT
CCAGCATCTACAACTTTCAACGCTGCATACAAGTGCTGCAGGGCCTTAGA
GACATCTACCCTGCAGCAGACATGGAGGTCGCGAACATCGAAGCGGCAGT
TAAGCTACAGTCCGATAGCGCAAACACCTTCCTCCGAATCATGCAATACA
CCAACAACTCCGGTTCTATGTCGCAGGGCCAATCACAAGAACACGCACGT
AAACAAAGCACCATCTCAAACCCACACACCATAGCATCAGCAGAAGACCG
AACCTCCAACCACTGGACCCCTCCCCAAGACGGACCCGACCCAACCAACA
ACCACAAGCAATCCGAACCTCAACATCCAGCCGGTCCAACCAAGCAACAA
CAACAACGCACACCAACCAAAAGACACTCCAGCACAATCAACCCACCCCT
AATCTTCAACAACACCAGCACCACCAACAACACAAACAATCCCTCCAACC
CCCTCCCCAAAAAAGCCGAACCCACCCCACCCAACGACTTCGACGACGAC
CCCATCTCCAACTTCCTCAACGACAACAACCCCACCATCTCCCCCCGGAA
CACCCAAACACAACCCAATCCCACCTTCGACCAAGGCTCCGATCAGTTCC
CCTTTGACTTTGATCTCGACCTCGACTCCTTCGCCGCCGACTTCCCGCCC
CAAAACCCACCATCCACCAACCTCAACCCCGCCTCTACTTCCAACCCCGA
CGCCTCCCCAGATCTCGACATAGATTGGGCTAGTGAGCTGCTTAGATGGA
CCGGACCGGGTCCGGAGGATGCATTGACCAATAATAATGATCTGTTCTCG
CCGTTTGCTCCGACTCCTAATGTTGAGAGTACCCCGGGGCAGAGGTCCAT
GAGTCATGTGACTGGAGATATTACAGGGGATTTAGATAGAGATTTGGGGT
TTGTTCCTTCTGATGAGGAGATCTTTTAGATGTTGACCGCCAAACGCAAG
CCGTCAAGTGCGGACTTGGGCGACGATAGACCAGTGGCGAAGAGAAGTAA
CAGCCTGAGCCATAATGCTCATGCACCTTGGTTGCAAGAGTCCAGACCTT
CTCGGAGCTGGCGGACTCTGGGAGATCGTGGGGTACGGACTTCGCTGCCA
CTAGAAAACATGGTCTCGACTGTGCGGGATCTCATTGACCCTGACTTTGA
CCCTCTTATTGCTCTCCTCGACGATGAGCCGCGCTTTCTGAAGCCTCTCC
CGTCTCGCATCCCACCGGAAGACCTAGAGTTTCTGCGATTCCGCGGGGCT
TTGTCGATCCCAGAGAGTGGTCTGCGGAATGAGCTACTGCGATGCTATAT
CAAATGGGTGCATAGCTTTATGCCGGTGTTGAACCTACAGGAATTCCTCC
GATGCGTTGCGGAAAATGACCCCAATGGTAACATTAGTCTCCTGCTGTTT
CAAGCAGTGATGTTCGTGGCGACAGCCTTCATCGATCTGCATCATTTACA
GGCCGCTGGGTATGCCACTCGGAAAATTGCCCGTAATGTGTTTTTTACGC
GGTTAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009691-T1.utr3p1 | KJC3_009691-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009691-T1.utr5p1 | KJC3_009691-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1151830..1154803 - |
|
