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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1176439..1177766+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009701-T1 ID=KJC3_009701-T1|Name=KJC3_009701-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1328bp|location=Sequence derived from alignment at ch7:1176439..1177766+ (Aspergillus niger KJC3)
ATGGCACTTAGAAGACCCCATCGCAAATCGCGCCACGGCTGCTTGCAATG
CAAGCGAAGGCGGGTGAAGGTATTCTCCTATTTCCGCAACCTTCTTGTGG
AATCCTCCCTGTGTCTCGTCTTACTTACTGACAATCCCAGTGTGATGAGT
TACGACCCTCCTGTTCAAATTGCTCAAAACGTCTAGCAACCTGCGAGTAT
GACTCTAGCTCATCACTGCTATGGACAAATGAAGAACCCCCTTCTCGCAC
ACGGTCCACGAAGTCTAGCCCAGCAGGAGCCTCCCAGTCTGACTCTGCTG
CGGCTACGACTGCCAACTCCCTCAACATCCTGGGAAGATGGGGTGATGCA
TTCGCCGCCTCGCAAGCAGTCCCCAGCTTGAACATCACAGACCTGGAGCT
GATGATGCAGTGGTGCAACTCAACGCACAAAAGTGTGTCTCGGGGCGAAC
ACACGGACCACATTTGGCGCTTTCGCGCTTCAGAGGAAGCAATCACGCAT
CCTTTCCTAATGCATGGGTTACTCGCGCTTTCCTCTCTGCATATTGCACG
AACAAAGCATGATACCCAGCAGCGTCCCATTTATCTCAGCACTGCAGTTG
CACATCAGGCTCAAGCACTGGCACTTTTCCGCGAGAGGCTAAGCGATATC
AACTCATCTAATGCAAGGGCTATGTTTGCATTCGCCAGTGTTGTGGTCTA
CTACACTTTTGGCTTACCTCACGCACCCGAGTCTAGCGATCCATGGGCAA
ACGTGGATGACCTGATTCAGATATTCACGCTCGCGCGCGGGGTTCAACAT
ATACTCAAGCAAGCTACTTCGGTCATAAAGAGCGATGAATGGAGCATGAT
TTTCAAGGTGGAAGACCTGAATGAGGACTACTTGAGAGACGCACAGTCAA
GCTTGGAGCGGTTGCATGAGGTGAACAACGCTTGCGGGGCTCAGGACGAC
ACCCATGACACAGCTGCGTACGAGATTGCACTTGACCGTCTGGCAGAAAT
GCTGGCTGAGGCTCGTACTGGTCTATCCTCTGTGTCGATTTCCTGTCGAT
GGGCGATCAGACAACTGCCTGAATTCATGGAACTTTTGCGGGAGCGCAAA
CCGCTAGCTTTGGTTATGCTAGCATATCACTGCGTTGTCTTCCATCACCT
GAGGGATGCATGGTATATGGGGGATCGGGGTAGCAGAGTAGCACGGGCAT
TATGGGAAGTTCTGGACGATAAATGGAGGCCACTGATTGAGAGTCATATG
CTGGAAATATTCGGAGAGACACATCCAGTTAATACGCCTGATACAGCAGG
AATAGAACATCAGGAAACCATTTCGTGA back to topCoding sequence (CDS) from alignment at ch7:1176439..1177766+ >KJC3_009701-T1 ID=KJC3_009701-T1|Name=KJC3_009701-T1|organism=Aspergillus niger KJC3|type=CDS|length=2514bp|location=Sequence derived from alignment at ch7:1176439..1177766+ (Aspergillus niger KJC3)
ATGGCACTTAGAAGACCCCATCGCAAATCGCGCCACGGCTGCTTGCAATG
CAAGCGAAGGCGGGTGAAGTGTGATGAGTTACGACCCTCCTGTTCAAATT
GCTCAAAACGTCTAGCAACCTGCGAGTATGACTCTAGCTCATCACTGCTA
TGGACAAATGAAGAACCCCCTTCTCGCACACGGTCCACGAAGTCTAGCCC
AGCAGGAGCCTCCCAGTCTGACTCTGCTGCGGCTACGACTGCCAACTCCC
TCAACATCCTGGGAAGATGGGGTGATGCATTCGCCGCCTCGCAAGCAGTC
CCCAGCTTGAACATCACAGACCTGGAGCTGATGATGCAGTGGTGCAACTC
AACGCACAAAAGTGTGTCTCGGGGCGAACACACGGACCACATTTGGCGCT
TTCGCGCTTCAGAGGAAGCAATCACGCATCCTTTCCTAATGCATGGGTTA
CTCGCGCTTTCCTCTCTGCATATTGCACGAACAAAGCATGATACCCAGCA
GCGTCCCATTTATCTCAGCACTGCAGTTGCACATCAGGCTCAAGCACTGG
CACTTTTCCGCGAGAGGCTAAGCGATATCAACTCATCTAATGCAAGGGCT
ATGTTTGCATTCGCCAGTGTTGTGGTCTACTACACTTTTGGCTTACCTCA
CGCACCCGAGTCTAGCGATCCATGGGCAAACGTGGATGACCTGATTCAGA
TATTCACGCTCGCGCGCGGGGTTCAACATATACTCAAGCAAGCTACTTCG
GTCATAAAGAGCGATGAATGGAGCATGATTTTCAAGGTGGAAGACCTGAA
TGAGGACTACTTGAGAGACGCACAGTCAAGCTTGGAGCGGTTGCATGAGG
TGAACAACGCTTGCGGGGCTCAGGACGACACCCATGACACAGCTGCGTAC
GAGATTGCACTTGACCGTCTGGCAGAAATGCTGGCTGAGGCTCGTACTGG
TCTATCCTCTGTGTCGATTTCCTGTCGATGGGCGATCAGACAACTGCCTG
AATTCATGGAACTTTTGCGGGAGCGCAAACCGCTAGCTTTGGTTATGCTA
GCATATCACTGCGTTGTCTTCCATCACCTGAGGGATGCATGGTATATGGG
GGATCGGGGTAGCAGAGTAGCACGGGCATTATGGGAAGTTCTGGACGATA
AATGGAGGCCACTGATTGAGAGTCATATGCTGGAAATATTCGGAGAGACA
CATCCAGTTAATACGCCTGATACAGCAGGAATAGAACATCAGGAAACCAT
TTCGTGAATGGCACTTAGAAGACCCCATCGCAAATCGCGCCACGGCTGCT
TGCAATGCAAGCGAAGGCGGGTGAAGTGTGATGAGTTACGACCCTCCTGT
TCAAATTGCTCAAAACGTCTAGCAACCTGCGAGTATGACTCTAGCTCATC
ACTGCTATGGACAAATGAAGAACCCCCTTCTCGCACACGGTCCACGAAGT
CTAGCCCAGCAGGAGCCTCCCAGTCTGACTCTGCTGCGGCTACGACTGCC
AACTCCCTCAACATCCTGGGAAGATGGGGTGATGCATTCGCCGCCTCGCA
AGCAGTCCCCAGCTTGAACATCACAGACCTGGAGCTGATGATGCAGTGGT
GCAACTCAACGCACAAAAGTGTGTCTCGGGGCGAACACACGGACCACATT
TGGCGCTTTCGCGCTTCAGAGGAAGCAATCACGCATCCTTTCCTAATGCA
TGGGTTACTCGCGCTTTCCTCTCTGCATATTGCACGAACAAAGCATGATA
CCCAGCAGCGTCCCATTTATCTCAGCACTGCAGTTGCACATCAGGCTCAA
GCACTGGCACTTTTCCGCGAGAGGCTAAGCGATATCAACTCATCTAATGC
AAGGGCTATGTTTGCATTCGCCAGTGTTGTGGTCTACTACACTTTTGGCT
TACCTCACGCACCCGAGTCTAGCGATCCATGGGCAAACGTGGATGACCTG
ATTCAGATATTCACGCTCGCGCGCGGGGTTCAACATATACTCAAGCAAGC
TACTTCGGTCATAAAGAGCGATGAATGGAGCATGATTTTCAAGGTGGAAG
ACCTGAATGAGGACTACTTGAGAGACGCACAGTCAAGCTTGGAGCGGTTG
CATGAGGTGAACAACGCTTGCGGGGCTCAGGACGACACCCATGACACAGC
TGCGTACGAGATTGCACTTGACCGTCTGGCAGAAATGCTGGCTGAGGCTC
GTACTGGTCTATCCTCTGTGTCGATTTCCTGTCGATGGGCGATCAGACAA
CTGCCTGAATTCATGGAACTTTTGCGGGAGCGCAAACCGCTAGCTTTGGT
TATGCTAGCATATCACTGCGTTGTCTTCCATCACCTGAGGGATGCATGGT
ATATGGGGGATCGGGGTAGCAGAGTAGCACGGGCATTATGGGAAGTTCTG
GACGATAAATGGAGGCCACTGATTGAGAGTCATATGCTGGAAATATTCGG
AGAGACACATCCAGTTAATACGCCTGATACAGCAGGAATAGAACATCAGG
AAACCATTTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:1176439..1177766 + |
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